RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 TPCN1Q9ULQ1 816 aa12.71□□□□□ -0.37
SSR3-202ENST00000463503 GPR179Q6PRD1 2367 aa12.71□□□□□ -0.38
SSR3-202ENST00000463503 BAHCC1Q9P281 2608 aa12.71□□□□□ -0.38
SSR3-202ENST00000463503 CACNA1IQ9P0X4 2223 aa12.7□□□□□ -0.38
SSR3-202ENST00000463503 MGEA5O60502 916 aa12.7□□□□□ -0.38
SSR3-202ENST00000463503 SRGAP2BP0DMP2 458 aa12.7□□□□□ -0.38
SSR3-202ENST00000463503 HOXB8P17481 243 aaPredicted RBP12.7□□□□□ -0.38
SSR3-202ENST00000463503 MARK3P27448 753 aa12.7□□□□□ -0.38
SSR3-202ENST00000463503 TMEM62Q0P6H9 643 aa12.7□□□□□ -0.38
SSR3-202ENST00000463503 PAK2Q13177 524 aa12.7□□□□□ -0.38
SSR3-202ENST00000463503 PDE12Q6L8Q7 609 aaKnown RBP12.7□□□□□ -0.38
SSR3-202ENST00000463503 LLGL2Q6P1M3 1020 aa12.7□□□□□ -0.38
SSR3-202ENST00000463503 CCDC105Q8IYK2 499 aa12.7□□□□□ -0.38
SSR3-202ENST00000463503 COLGALT1Q8NBJ5 622 aa12.7□□□□□ -0.38
SSR3-202ENST00000463503 CTCFLQ8NI51 663 aaPredicted RBP12.7□□□□□ -0.38
SSR3-202ENST00000463503 MICAL1Q8TDZ2 1067 aa12.7□□□□□ -0.38
SSR3-202ENST00000463503 FAM49AQ9H0Q0 323 aaPredicted RBP12.7□□□□□ -0.38
SSR3-202ENST00000463503 CWH43Q9H720 699 aa12.7□□□□□ -0.38
SSR3-202ENST00000463503 FAM217BQ9NTX9 383 aaPredicted RBP12.7□□□□□ -0.38
SSR3-202ENST00000463503 ERAP1Q9NZ08 941 aa12.7□□□□□ -0.38
SSR3-202ENST00000463503 RTEL1Q9NZ71 1219 aa12.7□□□□□ -0.38
SSR3-202ENST00000463503 LZTS1Q9Y250 596 aa12.7□□□□□ -0.38
SSR3-202ENST00000463503 PCDHB12Q9Y5F1 795 aa12.7□□□□□ -0.38
SSR3-202ENST00000463503 TRPV2Q9Y5S1 764 aa12.7□□□□□ -0.38
SSR3-202ENST00000463503 KDM3AQ9Y4C1 1321 aa12.69□□□□□ -0.38
SSR3-202ENST00000463503 GSTTP1A0A1W2PQM5 241 aa12.69□□□□□ -0.38
SSR3-202ENST00000463503 GOLGA8BA8MQT2 603 aa12.69□□□□□ -0.38
SSR3-202ENST00000463503 KLRF2D3W0D1 207 aa12.69□□□□□ -0.38
SSR3-202ENST00000463503 CYTH3O43739 400 aa12.69□□□□□ -0.38
SSR3-202ENST00000463503 KCNA2P16389 499 aa12.69□□□□□ -0.38
SSR3-202ENST00000463503 NPR3P17342 541 aa12.69□□□□□ -0.38
SSR3-202ENST00000463503 AOC1P19801 751 aa12.69□□□□□ -0.38
SSR3-202ENST00000463503 SARSP49591 514 aaKnown RBP12.69□□□□□ -0.38
SSR3-202ENST00000463503 METAP2P50579 478 aaKnown RBP eCLIP12.69□□□□□ -0.38
SSR3-202ENST00000463503 ME3Q16798 604 aa12.69□□□□□ -0.38
SSR3-202ENST00000463503 RTN1Q16799 776 aa12.69□□□□□ -0.38
SSR3-202ENST00000463503 HOMER1Q86YM7 354 aa12.69□□□□□ -0.38
SSR3-202ENST00000463503 TCF25Q9BQ70 676 aa12.69□□□□□ -0.38
SSR3-202ENST00000463503 SPZ1Q9BXG8 430 aa12.69□□□□□ -0.38
SSR3-202ENST00000463503 RIOX1Q9H6W3 641 aa12.69□□□□□ -0.38
SSR3-202ENST00000463503 TMEM260Q9NX78 707 aa12.69□□□□□ -0.38
SSR3-202ENST00000463503 CACNA1GO43497 2377 aa12.69□□□□□ -0.38
SSR3-202ENST00000463503 MYH15Q9Y2K3 1946 aa12.68□□□□□ -0.38
SSR3-202ENST00000463503 GOLGA8AA7E2F4 631 aa12.68□□□□□ -0.38
SSR3-202ENST00000463503 TBKBP1A7MCY6 615 aa12.68□□□□□ -0.38
SSR3-202ENST00000463503 PI15O43692 258 aa12.68□□□□□ -0.38
SSR3-202ENST00000463503 ATP9AO75110 1047 aa12.68□□□□□ -0.38
SSR3-202ENST00000463503 CD2BP2O95400 341 aaKnown RBP12.68□□□□□ -0.38
SSR3-202ENST00000463503 RPLP2P05387 115 aaKnown RBP12.68□□□□□ -0.38
SSR3-202ENST00000463503 IFNAR1P17181 557 aa12.68□□□□□ -0.38
SSR3-202ENST00000463503 FUT2Q10981 343 aa12.68□□□□□ -0.38
SSR3-202ENST00000463503 ANGPT1Q15389 498 aa12.68□□□□□ -0.38
SSR3-202ENST00000463503 TMEM266Q2M3C6 531 aa12.68□□□□□ -0.38
SSR3-202ENST00000463503 FAM102BQ5T8I3 360 aa12.68□□□□□ -0.38
SSR3-202ENST00000463503 IER5Q5VY09 327 aa12.68□□□□□ -0.38
SSR3-202ENST00000463503 PCNX4Q63HM2 1172 aa12.68□□□□□ -0.38
SSR3-202ENST00000463503 TMTC3Q6ZXV5 915 aa12.68□□□□□ -0.38
SSR3-202ENST00000463503 DGLUCYQ7Z3D6 616 aa12.68□□□□□ -0.38
SSR3-202ENST00000463503 MICU3Q86XE3 530 aa12.68□□□□□ -0.38
SSR3-202ENST00000463503 THNSL1Q8IYQ7 743 aa12.68□□□□□ -0.38
SSR3-202ENST00000463503 FEZF2Q8TBJ5 459 aa12.68□□□□□ -0.38
SSR3-202ENST00000463503 MRPS27Q92552 414 aaKnown RBP12.68□□□□□ -0.38
SSR3-202ENST00000463503 GTF3C6Q969F1 213 aa12.68□□□□□ -0.38
SSR3-202ENST00000463503 NECTIN4Q96NY8 510 aa12.68□□□□□ -0.38
SSR3-202ENST00000463503 PIGSQ96S52 555 aa12.68□□□□□ -0.38
SSR3-202ENST00000463503 SLKQ9H2G2 1235 aaPredicted RBP12.68□□□□□ -0.38
SSR3-202ENST00000463503 ADAM7Q9H2U9 754 aa12.68□□□□□ -0.38
SSR3-202ENST00000463503 AAASQ9NRG9 546 aa12.68□□□□□ -0.38
SSR3-202ENST00000463503 LRFN2Q9ULH4 789 aa12.68□□□□□ -0.38
SSR3-202ENST00000463503 HCFC2Q9Y5Z7 792 aa12.68□□□□□ -0.38
SSR3-202ENST00000463503 CDC27P30260 824 aa12.67□□□□□ -0.38
SSR3-202ENST00000463503 IGBP1P78318 339 aa12.67□□□□□ -0.38
SSR3-202ENST00000463503 PLCB3Q01970 1234 aa12.67□□□□□ -0.38
SSR3-202ENST00000463503 ITIH3Q06033 890 aa12.67□□□□□ -0.38
SSR3-202ENST00000463503 SCRN1Q12765 414 aa12.67□□□□□ -0.38
SSR3-202ENST00000463503 CUL4AQ13619 759 aa12.67□□□□□ -0.38
SSR3-202ENST00000463503 NTRK3Q16288 839 aa12.67□□□□□ -0.38
SSR3-202ENST00000463503 SPOUT1Q5T280 376 aaKnown RBP12.67□□□□□ -0.38
SSR3-202ENST00000463503 ZDHHC14Q8IZN3 488 aa12.67□□□□□ -0.38
SSR3-202ENST00000463503 TDRD5Q8NAT2 981 aaKnown RBP12.67□□□□□ -0.38
SSR3-202ENST00000463503 CNTNAP3BQ96NU0 1288 aa12.67□□□□□ -0.38
SSR3-202ENST00000463503 PCYT2Q99447 389 aa12.67□□□□□ -0.38
SSR3-202ENST00000463503 LLPHQ9BRT6 129 aaKnown RBP12.67□□□□□ -0.38
SSR3-202ENST00000463503 MYL10Q9BUA6 226 aa12.67□□□□□ -0.38
SSR3-202ENST00000463503 CNTNAP3Q9BZ76 1288 aa12.67□□□□□ -0.38
SSR3-202ENST00000463503 MFSD1Q9H3U5 465 aa12.67□□□□□ -0.38
SSR3-202ENST00000463503 ERVK-5Q9HDB9 667 aa12.67□□□□□ -0.38
SSR3-202ENST00000463503 ENTPD7Q9NQZ7 604 aa12.67□□□□□ -0.38
SSR3-202ENST00000463503 TYW1Q9NV66 732 aaKnown RBP12.67□□□□□ -0.38
SSR3-202ENST00000463503 MTCL1Q9Y4B5 1905 aaKnown RBP12.66□□□□□ -0.38
SSR3-202ENST00000463503 C9IYK1 514 aa12.66□□□□□ -0.38
SSR3-202ENST00000463503 K7ELQ4 463 aaPredicted RBP12.66□□□□□ -0.38
SSR3-202ENST00000463503 LARGE1O95461 756 aa12.66□□□□□ -0.38
SSR3-202ENST00000463503 WEE2P0C1S8 567 aa12.66□□□□□ -0.38
SSR3-202ENST00000463503 FGFR1P11362 822 aa12.66□□□□□ -0.38
SSR3-202ENST00000463503 INSRRP14616 1297 aa12.66□□□□□ -0.38
SSR3-202ENST00000463503 LAG3P18627 525 aa12.66□□□□□ -0.38
SSR3-202ENST00000463503 CPLX2Q6PUV4 134 aaKnown RBP12.66□□□□□ -0.38
SSR3-202ENST00000463503 SRBD1Q8N5C6 995 aaKnown RBP12.66□□□□□ -0.38
SSR3-202ENST00000463503 TRAPPC12Q8WVT3 735 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms