RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 TUFT1Q9NNX1 390 aa19.79■□□□□ 0.76
VPS52-214ENST00000463486 ANKEF1Q9NU02 776 aa19.79■□□□□ 0.76
VPS52-214ENST00000463486 PPME1Q9Y570 386 aa19.79■□□□□ 0.76
VPS52-214ENST00000463486 PTPRSQ13332 1948 aa19.78■□□□□ 0.76
VPS52-214ENST00000463486 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.78■□□□□ 0.76
VPS52-214ENST00000463486 ZBBXA8MT70 800 aa19.78■□□□□ 0.76
VPS52-214ENST00000463486 PBX2P40425 430 aa19.78■□□□□ 0.76
VPS52-214ENST00000463486 DEFB103AP81534 67 aa19.78■□□□□ 0.76
VPS52-214ENST00000463486 IKBKEQ14164 716 aa19.78■□□□□ 0.76
VPS52-214ENST00000463486 KIZQ2M2Z5 673 aa19.78■□□□□ 0.76
VPS52-214ENST00000463486 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.78■□□□□ 0.76
VPS52-214ENST00000463486 TSHZ1Q6ZSZ6 1077 aa19.78■□□□□ 0.76
VPS52-214ENST00000463486 PHOSPHO2Q8TCD6 241 aa19.78■□□□□ 0.76
VPS52-214ENST00000463486 PIGOQ8TEQ8 1089 aa19.78■□□□□ 0.76
VPS52-214ENST00000463486 CEP170P1Q96L14 293 aa19.78■□□□□ 0.76
VPS52-214ENST00000463486 PBX4Q9BYU1 374 aa19.78■□□□□ 0.76
VPS52-214ENST00000463486 MTIF3Q9H2K0 278 aaKnown RBP19.78■□□□□ 0.76
VPS52-214ENST00000463486 XPNPEP1Q9NQW7 623 aa19.78■□□□□ 0.76
VPS52-214ENST00000463486 LRWD1Q9UFC0 647 aa19.78■□□□□ 0.76
VPS52-214ENST00000463486 PP2D1A8MPX8 630 aa19.77■□□□□ 0.76
VPS52-214ENST00000463486 ATP2A2P16615 1042 aaKnown RBP19.77■□□□□ 0.76
VPS52-214ENST00000463486 CD52P31358 61 aa19.77■□□□□ 0.76
VPS52-214ENST00000463486 CRYBB1P53674 252 aaPredicted RBP19.77■□□□□ 0.76
VPS52-214ENST00000463486 NLRP11P59045 1033 aaKnown RBP19.77■□□□□ 0.76
VPS52-214ENST00000463486 PTPAQ15257 358 aa19.77■□□□□ 0.76
VPS52-214ENST00000463486 ARL6IP4Q66PJ3 421 aaKnown RBP19.77■□□□□ 0.76
VPS52-214ENST00000463486 DTHD1Q6ZMT9 781 aa19.77■□□□□ 0.76
VPS52-214ENST00000463486 OTUD6AQ7L8S5 288 aa19.77■□□□□ 0.76
VPS52-214ENST00000463486 TMCO2Q7Z6W1 182 aaPredicted RBP19.77■□□□□ 0.76
VPS52-214ENST00000463486 RTN4RL1Q86UN2 441 aaPredicted RBP19.77■□□□□ 0.76
VPS52-214ENST00000463486 USP38Q8NB14 1042 aa19.77■□□□□ 0.76
VPS52-214ENST00000463486 TMX1Q9H3N1 280 aa19.77■□□□□ 0.76
VPS52-214ENST00000463486 PADI3Q9ULW8 664 aa19.77■□□□□ 0.76
VPS52-214ENST00000463486 NOC2LQ9Y3T9 749 aaKnown RBP19.77■□□□□ 0.76
VPS52-214ENST00000463486 LOXHD1Q8IVV2 1947 aa19.76■□□□□ 0.75
VPS52-214ENST00000463486 EFCAB14O75071 495 aa19.76■□□□□ 0.75
VPS52-214ENST00000463486 MUTP22033 750 aa19.76■□□□□ 0.75
VPS52-214ENST00000463486 TMOD1P28289 359 aa19.76■□□□□ 0.75
VPS52-214ENST00000463486 CDC25AP30304 524 aa19.76■□□□□ 0.75
VPS52-214ENST00000463486 RFC5P40937 340 aa19.76■□□□□ 0.75
VPS52-214ENST00000463486 RARRES1P49788 294 aa19.76■□□□□ 0.75
VPS52-214ENST00000463486 GPC3P51654 580 aa19.76■□□□□ 0.75
VPS52-214ENST00000463486 SF3A1Q15459 793 aaKnown RBP19.76■□□□□ 0.75
VPS52-214ENST00000463486 TMEM266Q2M3C6 531 aa19.76■□□□□ 0.75
VPS52-214ENST00000463486 XKR9Q5GH70 373 aa19.76■□□□□ 0.75
VPS52-214ENST00000463486 POTEGQ6S5H5 508 aa19.76■□□□□ 0.75
VPS52-214ENST00000463486 HERC6Q8IVU3 1022 aa19.76■□□□□ 0.75
VPS52-214ENST00000463486 LINC01599Q8WXQ3 324 aa19.76■□□□□ 0.75
VPS52-214ENST00000463486 APBB2Q92870 758 aa19.76■□□□□ 0.75
VPS52-214ENST00000463486 PPP1R16BQ96T49 567 aa19.76■□□□□ 0.75
VPS52-214ENST00000463486 SLC9A7Q96T83 725 aa19.76■□□□□ 0.75
VPS52-214ENST00000463486 OSMRQ99650 979 aa19.76■□□□□ 0.75
VPS52-214ENST00000463486 ERVK-5Q9HDB9 667 aa19.76■□□□□ 0.75
VPS52-214ENST00000463486 AKT3Q9Y243 479 aa19.76■□□□□ 0.75
VPS52-214ENST00000463486 YBX2Q9Y2T7 364 aaKnown RBP19.76■□□□□ 0.75
VPS52-214ENST00000463486 CLIC4Q9Y696 253 aa19.76■□□□□ 0.75
VPS52-214ENST00000463486 MICAL3Q7RTP6 2002 aa19.76■□□□□ 0.75
VPS52-214ENST00000463486 M0QZ92 97 aa19.75■□□□□ 0.75
VPS52-214ENST00000463486 ENPP3O14638 875 aa19.75■□□□□ 0.75
VPS52-214ENST00000463486 RABGGTBP53611 331 aa19.75■□□□□ 0.75
VPS52-214ENST00000463486 GRIN1Q05586 938 aa19.75■□□□□ 0.75
VPS52-214ENST00000463486 PKP1Q13835 747 aa19.75■□□□□ 0.75
VPS52-214ENST00000463486 CRIPAKQ8N1N5 446 aa19.75■□□□□ 0.75
VPS52-214ENST00000463486 SPRYD3Q8NCJ5 442 aa19.75■□□□□ 0.75
VPS52-214ENST00000463486 ERMNQ8TAM6 284 aa19.75■□□□□ 0.75
VPS52-214ENST00000463486 NACC1Q96RE7 527 aa19.75■□□□□ 0.75
VPS52-214ENST00000463486 MAP7D2Q96T17 732 aa19.75■□□□□ 0.75
VPS52-214ENST00000463486 TTYH1Q9H313 450 aaPredicted RBP19.75■□□□□ 0.75
VPS52-214ENST00000463486 ZSCAN16Q9H4T2 348 aaPredicted RBP19.75■□□□□ 0.75
VPS52-214ENST00000463486 SUCLA2Q9P2R7 463 aaPredicted RBP19.75■□□□□ 0.75
VPS52-214ENST00000463486 DBR1Q9UK59 544 aaKnown RBP19.75■□□□□ 0.75
VPS52-214ENST00000463486 ARID2Q68CP9 1835 aa19.74■□□□□ 0.75
VPS52-214ENST00000463486 MYOGP15173 224 aa19.74■□□□□ 0.75
VPS52-214ENST00000463486 DNAJB2P25686 324 aa19.74■□□□□ 0.75
VPS52-214ENST00000463486 CCT6AP40227 531 aaKnown RBP19.74■□□□□ 0.75
VPS52-214ENST00000463486 FAM228AQ86W67 206 aa19.74■□□□□ 0.75
VPS52-214ENST00000463486 KSR1Q8IVT5 923 aa19.74■□□□□ 0.75
VPS52-214ENST00000463486 ZNF710Q8N1W2 664 aa19.74■□□□□ 0.75
VPS52-214ENST00000463486 PRPF31Q8WWY3 499 aaKnown RBP19.74■□□□□ 0.75
VPS52-214ENST00000463486 SLC7A3Q8WY07 619 aa19.74■□□□□ 0.75
VPS52-214ENST00000463486 TMEM143Q96AN5 459 aa19.74■□□□□ 0.75
VPS52-214ENST00000463486 ZNF668Q96K58 619 aaPredicted RBP19.74■□□□□ 0.75
VPS52-214ENST00000463486 JPH2Q9BR39 696 aaPredicted RBP19.74■□□□□ 0.75
VPS52-214ENST00000463486 GINS2Q9Y248 185 aa19.74■□□□□ 0.75
VPS52-214ENST00000463486 VWA3AA6NCI4 1184 aa19.73■□□□□ 0.75
VPS52-214ENST00000463486 MGEA5O60502 916 aa19.73■□□□□ 0.75
VPS52-214ENST00000463486 DARSP14868 501 aaKnown RBP19.73■□□□□ 0.75
VPS52-214ENST00000463486 POLGP54098 1239 aaPredicted RBP19.73■□□□□ 0.75
VPS52-214ENST00000463486 EMC2Q15006 297 aa19.73■□□□□ 0.75
VPS52-214ENST00000463486 HYIQ5T013 277 aa19.73■□□□□ 0.75
VPS52-214ENST00000463486 HAUS3Q68CZ6 603 aa19.73■□□□□ 0.75
VPS52-214ENST00000463486 Q7L0L9 218 aa19.73■□□□□ 0.75
VPS52-214ENST00000463486 EXOC8Q8IYI6 725 aa19.73■□□□□ 0.75
VPS52-214ENST00000463486 SNX29Q8TEQ0 813 aa19.73■□□□□ 0.75
VPS52-214ENST00000463486 PNMA5Q96PV4 448 aa19.73■□□□□ 0.75
VPS52-214ENST00000463486 USP28Q96RU2 1077 aa19.73■□□□□ 0.75
VPS52-214ENST00000463486 BMP2KQ9NSY1 1161 aaPredicted RBP19.73■□□□□ 0.75
VPS52-214ENST00000463486 ST3GAL5Q9UNP4 418 aa19.73■□□□□ 0.75
VPS52-214ENST00000463486 PCDHA11Q9Y5I1 949 aa19.73■□□□□ 0.75
VPS52-214ENST00000463486 GBF1Q92538 1859 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms