RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	ESYT2	A0FGR8	921 aa		12.69	□□□□□ -0.38
PTPN7-204	ENST00000462815	TMEM221	A6NGB7	291 aa		12.69	□□□□□ -0.38
PTPN7-204	ENST00000462815	TBKBP1	A7MCY6	615 aa		12.69	□□□□□ -0.38
PTPN7-204	ENST00000462815		M0R296	226 aa		12.69	□□□□□ -0.38
PTPN7-204	ENST00000462815	IPO5	O00410	1097 aa	Known RBP	12.69	□□□□□ -0.38
PTPN7-204	ENST00000462815	FGFR1	P11362	822 aa		12.69	□□□□□ -0.38
PTPN7-204	ENST00000462815	ATF7	P17544	494 aa	Predicted RBP	12.69	□□□□□ -0.38
PTPN7-204	ENST00000462815	RCAN1	P53805	252 aa		12.69	□□□□□ -0.38
PTPN7-204	ENST00000462815	PLCB3	Q01970	1234 aa		12.69	□□□□□ -0.38
PTPN7-204	ENST00000462815	FAM160B1	Q5W0V3	765 aa		12.69	□□□□□ -0.38
PTPN7-204	ENST00000462815	SWSAP1	Q6NVH7	229 aa		12.69	□□□□□ -0.38
PTPN7-204	ENST00000462815	PDXDC2P	Q6P474	469 aa		12.69	□□□□□ -0.38
PTPN7-204	ENST00000462815	PLA2G4D	Q86XP0	818 aa		12.69	□□□□□ -0.38
PTPN7-204	ENST00000462815	RASGRP4	Q8TDF6	673 aa		12.69	□□□□□ -0.38
PTPN7-204	ENST00000462815	BBX	Q8WY36	941 aa	Predicted RBP	12.69	□□□□□ -0.38
PTPN7-204	ENST00000462815	PPP2R3C	Q969Q6	453 aa		12.69	□□□□□ -0.38
PTPN7-204	ENST00000462815	ASIC4	Q96FT7	647 aa		12.69	□□□□□ -0.38
PTPN7-204	ENST00000462815	MFSD14A	Q96MC6	490 aa		12.69	□□□□□ -0.38
PTPN7-204	ENST00000462815	CASD1	Q96PB1	797 aa		12.69	□□□□□ -0.38
PTPN7-204	ENST00000462815	PPP1R16B	Q96T49	567 aa		12.69	□□□□□ -0.38
PTPN7-204	ENST00000462815	PHF7	Q9BWX1	381 aa	Predicted RBP	12.69	□□□□□ -0.38
PTPN7-204	ENST00000462815	ZMYND12	Q9H0C1	365 aa		12.69	□□□□□ -0.38
PTPN7-204	ENST00000462815	ADAMTS10	Q9H324	1103 aa		12.69	□□□□□ -0.38
PTPN7-204	ENST00000462815	LRFN2	Q9ULH4	789 aa		12.69	□□□□□ -0.38
PTPN7-204	ENST00000462815	GINS2	Q9Y248	185 aa		12.69	□□□□□ -0.38
PTPN7-204	ENST00000462815	PCDHB7	Q9Y5E2	793 aa		12.69	□□□□□ -0.38
PTPN7-204	ENST00000462815	EVPL	Q92817	2033 aa		12.69	□□□□□ -0.38
PTPN7-204	ENST00000462815	KLF18	A0A0U1RQI7	1052 aa		12.68	□□□□□ -0.38
PTPN7-204	ENST00000462815	GOLGA8A	A7E2F4	631 aa		12.68	□□□□□ -0.38
PTPN7-204	ENST00000462815	GOLGA8B	A8MQT2	603 aa		12.68	□□□□□ -0.38
PTPN7-204	ENST00000462815	BACH1	O14867	736 aa		12.68	□□□□□ -0.38
PTPN7-204	ENST00000462815	GPR182	O15218	404 aa		12.68	□□□□□ -0.38
PTPN7-204	ENST00000462815	ZNF862	O60290	1169 aa		12.68	□□□□□ -0.38
PTPN7-204	ENST00000462815	PPFIA3	O75145	1194 aa		12.68	□□□□□ -0.38
PTPN7-204	ENST00000462815	VTN	P04004	478 aa		12.68	□□□□□ -0.38
PTPN7-204	ENST00000462815	CIITA	P33076	1130 aa		12.68	□□□□□ -0.38
PTPN7-204	ENST00000462815	ADD1	P35611	737 aa	Known RBP	12.68	□□□□□ -0.38
PTPN7-204	ENST00000462815	TCF15	Q12870	199 aa		12.68	□□□□□ -0.38
PTPN7-204	ENST00000462815	BMP2KL	Q5H9B9	411 aa		12.68	□□□□□ -0.38
PTPN7-204	ENST00000462815	JAKMIP3	Q5VZ66	844 aa		12.68	□□□□□ -0.38
PTPN7-204	ENST00000462815	ZNF746	Q6NUN9	644 aa	Predicted RBP	12.68	□□□□□ -0.38
PTPN7-204	ENST00000462815	SYCE2	Q6PIF2	218 aa		12.68	□□□□□ -0.38
PTPN7-204	ENST00000462815	KCNB2	Q92953	911 aa		12.68	□□□□□ -0.38
PTPN7-204	ENST00000462815	CDCA3	Q99618	268 aa	Predicted RBP	12.68	□□□□□ -0.38
PTPN7-204	ENST00000462815	GLT8D2	Q9H1C3	349 aa		12.68	□□□□□ -0.38
PTPN7-204	ENST00000462815	TLE6	Q9H808	572 aa		12.68	□□□□□ -0.38
PTPN7-204	ENST00000462815	LZTS1	Q9Y250	596 aa		12.68	□□□□□ -0.38
PTPN7-204	ENST00000462815	PCDHB12	Q9Y5F1	795 aa		12.68	□□□□□ -0.38
PTPN7-204	ENST00000462815	DENND3	A2RUS2	1198 aa		12.67	□□□□□ -0.38
PTPN7-204	ENST00000462815	HIDE1	A8MVS5	230 aa		12.67	□□□□□ -0.38
PTPN7-204	ENST00000462815	CLCN3	P51790	818 aa		12.67	□□□□□ -0.38
PTPN7-204	ENST00000462815	APOBR	Q0VD83	1088 aa		12.67	□□□□□ -0.38
PTPN7-204	ENST00000462815	MIS18BP1	Q6P0N0	1132 aa		12.67	□□□□□ -0.38
PTPN7-204	ENST00000462815	SYNE3	Q6ZMZ3	975 aa		12.67	□□□□□ -0.38
PTPN7-204	ENST00000462815	ZNF598	Q86UK7	904 aa	Known RBP	12.67	□□□□□ -0.38
PTPN7-204	ENST00000462815	SMAP1	Q8IYB5	467 aa	Predicted RBP	12.67	□□□□□ -0.38
PTPN7-204	ENST00000462815	MRPS27	Q92552	414 aa	Known RBP	12.67	□□□□□ -0.38
PTPN7-204	ENST00000462815	CEP89	Q96ST8	783 aa		12.67	□□□□□ -0.38
PTPN7-204	ENST00000462815	ZNF577	Q9BSK1	485 aa		12.67	□□□□□ -0.38
PTPN7-204	ENST00000462815	WDR87	Q6ZQQ6	2873 aa		12.66	□□□□□ -0.38
PTPN7-204	ENST00000462815	CPA1	P15085	419 aa		12.66	□□□□□ -0.38
PTPN7-204	ENST00000462815	LAG3	P18627	525 aa		12.66	□□□□□ -0.38
PTPN7-204	ENST00000462815	PBX3	P40426	434 aa		12.66	□□□□□ -0.38
PTPN7-204	ENST00000462815	SET	Q01105	290 aa	Predicted RBP	12.66	□□□□□ -0.38
PTPN7-204	ENST00000462815	NTRK3	Q16288	839 aa		12.66	□□□□□ -0.38
PTPN7-204	ENST00000462815	UGCG	Q16739	394 aa		12.66	□□□□□ -0.38
PTPN7-204	ENST00000462815	CLLU1OS	Q5K130	101 aa		12.66	□□□□□ -0.38
PTPN7-204	ENST00000462815	PDE12	Q6L8Q7	609 aa	Known RBP	12.66	□□□□□ -0.38
PTPN7-204	ENST00000462815	ANKRD54	Q6NXT1	300 aa		12.66	□□□□□ -0.38
PTPN7-204	ENST00000462815	TMEM117	Q9H0C3	514 aa		12.66	□□□□□ -0.38
PTPN7-204	ENST00000462815	ATP6V0A4	Q9HBG4	840 aa		12.66	□□□□□ -0.38
PTPN7-204	ENST00000462815	AAAS	Q9NRG9	546 aa		12.66	□□□□□ -0.38
PTPN7-204	ENST00000462815	TBC1D22B	Q9NU19	505 aa		12.66	□□□□□ -0.38
PTPN7-204	ENST00000462815	GABBR1	Q9UBS5	961 aa		12.66	□□□□□ -0.38
PTPN7-204	ENST00000462815	CDH22	Q9UJ99	828 aa		12.66	□□□□□ -0.38
PTPN7-204	ENST00000462815	PCDHA10	Q9Y5I2	948 aa		12.66	□□□□□ -0.38
PTPN7-204	ENST00000462815	FSD2	A1L4K1	749 aa		12.65	□□□□□ -0.38
PTPN7-204	ENST00000462815	STBD1	O95210	358 aa		12.65	□□□□□ -0.38
PTPN7-204	ENST00000462815	IBSP	P21815	317 aa	Predicted RBP	12.65	□□□□□ -0.38
PTPN7-204	ENST00000462815	ZNF76	P36508	570 aa		12.65	□□□□□ -0.38
PTPN7-204	ENST00000462815	VCP	P55072	806 aa	Known RBP	12.65	□□□□□ -0.38
PTPN7-204	ENST00000462815	SIGLEC14	Q08ET2	396 aa		12.65	□□□□□ -0.38
PTPN7-204	ENST00000462815	TARBP2	Q15633	366 aa	Known RBP	12.65	□□□□□ -0.38
PTPN7-204	ENST00000462815	PTPN21	Q16825	1174 aa		12.65	□□□□□ -0.38
PTPN7-204	ENST00000462815	ODR4	Q5SWX8	454 aa		12.65	□□□□□ -0.38
PTPN7-204	ENST00000462815	RNF20	Q5VTR2	975 aa		12.65	□□□□□ -0.38
PTPN7-204	ENST00000462815	PLPP4	Q5VZY2	271 aa		12.65	□□□□□ -0.38
PTPN7-204	ENST00000462815	KCNT2	Q6UVM3	1135 aa		12.65	□□□□□ -0.38
PTPN7-204	ENST00000462815	B3GNT9	Q6UX72	402 aa		12.65	□□□□□ -0.38
PTPN7-204	ENST00000462815	ECHDC2	Q86YB7	292 aa		12.65	□□□□□ -0.38
PTPN7-204	ENST00000462815	THNSL1	Q8IYQ7	743 aa		12.65	□□□□□ -0.38
PTPN7-204	ENST00000462815	FBXL16	Q8N461	479 aa		12.65	□□□□□ -0.38
PTPN7-204	ENST00000462815	LRRC71	Q8N4P6	559 aa		12.65	□□□□□ -0.38
PTPN7-204	ENST00000462815	PBXIP1	Q96AQ6	731 aa		12.65	□□□□□ -0.38
PTPN7-204	ENST00000462815	RPGRIP1	Q96KN7	1286 aa		12.65	□□□□□ -0.38
PTPN7-204	ENST00000462815	AGXT2	Q9BYV1	514 aa		12.65	□□□□□ -0.38
PTPN7-204	ENST00000462815	RNF216	Q9NWF9	866 aa	Predicted RBP	12.65	□□□□□ -0.38
PTPN7-204	ENST00000462815	ZDBF2	Q9HCK1	2354 aa		12.65	□□□□□ -0.38
PTPN7-204	ENST00000462815	MYH9	P35579	1960 aa	Known RBP	12.65	□□□□□ -0.38
PTPN7-204	ENST00000462815	DCHS1	Q96JQ0	3298 aa		12.64	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms