RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 RAPGEF5Q92565 580 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 RPGRQ92834 1020 aaKnown RBP3.82□□□□□ -1.8
COL8A1-204ENST00000462604 TATDN2Q93075 761 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 MAGOHBQ96A72 148 aaKnown RBP3.82□□□□□ -1.8
COL8A1-204ENST00000462604 VTI1AQ96AJ9 217 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 CENPTQ96BT3 561 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 TLCD1Q96CP7 247 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 HVCN1Q96D96 273 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 CCDC97Q96F63 343 aaPredicted RBP3.82□□□□□ -1.8
COL8A1-204ENST00000462604 CHMP6Q96FZ7 201 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 SGSM3Q96HU1 749 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 HES6Q96HZ4 224 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 SEC16BQ96JE7 1060 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 RUNDC3BQ96NL0 473 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 XPO6Q96QU8 1125 aaKnown RBP3.82□□□□□ -1.8
COL8A1-204ENST00000462604 SELENOSQ9BQE4 189 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 FGFBP2Q9BYJ0 223 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 STK33Q9BYT3 514 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 ANO3Q9BYT9 981 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 FAM129AQ9BZQ8 928 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 INTS2Q9H0H0 1204 aaKnown RBP3.82□□□□□ -1.8
COL8A1-204ENST00000462604 DDX47Q9H0S4 455 aaKnown RBP3.82□□□□□ -1.8
COL8A1-204ENST00000462604 TAOK3Q9H2K8 898 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 DPH5Q9H2P9 285 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 CXorf56Q9H5V9 222 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 JMJD4Q9H9V9 463 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 POLD4Q9HCU8 107 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 KCNMB3Q9NPA1 279 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 KLC4Q9NSK0 619 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.82□□□□□ -1.8
COL8A1-204ENST00000462604 SAMD15Q9P1V8 674 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 MTRF1LQ9UGC7 380 aaKnown RBP3.82□□□□□ -1.8
COL8A1-204ENST00000462604 SRP68Q9UHB9 627 aaKnown RBP3.82□□□□□ -1.8
COL8A1-204ENST00000462604 DDX20Q9UHI6 824 aaKnown RBP3.82□□□□□ -1.8
COL8A1-204ENST00000462604 SLC12A6Q9UHW9 1150 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 MTUS1Q9ULD2 1270 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 TTC7AQ9ULT0 858 aaPredicted RBP3.82□□□□□ -1.8
COL8A1-204ENST00000462604 NENFQ9UMX5 172 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 STXBP5LQ9Y2K9 1186 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 FRMD4BQ9Y2L6 1034 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 ATP8A1Q9Y2Q0 1164 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 RTCBQ9Y3I0 505 aaKnown RBP3.82□□□□□ -1.8
COL8A1-204ENST00000462604 MYH7P12883 1935 aa3.82□□□□□ -1.8
COL8A1-204ENST00000462604 STRCP1A6NGW2 1772 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 KIAA1551Q9HCM1 1747 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 COL4A1P02462 1669 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 PFASO15067 1338 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 SYNGAP1Q96PV0 1343 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 CFAP73A6NFT4 308 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 SPDYE3A6NKU9 549 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 CCT8L1PA6NM43 557 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 MIF4GDA9UHW6 222 aaKnown RBP3.81□□□□□ -1.8
COL8A1-204ENST00000462604 USP17L10C9JJH3 530 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 GPR37O15354 613 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 RGS16O15492 202 aaPredicted RBP3.81□□□□□ -1.8
COL8A1-204ENST00000462604 DDX3YO15523 660 aaKnown RBP3.81□□□□□ -1.8
COL8A1-204ENST00000462604 ASAP2O43150 1006 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 TTI1O43156 1089 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 KIF1CO43896 1103 aaKnown RBP3.81□□□□□ -1.8
COL8A1-204ENST00000462604 BUB1BO60566 1050 aaPredicted RBP3.81□□□□□ -1.8
COL8A1-204ENST00000462604 CTNND1O60716 968 aaKnown RBP3.81□□□□□ -1.8
COL8A1-204ENST00000462604 PPP1R11O60927 126 aaPredicted RBP3.81□□□□□ -1.8
COL8A1-204ENST00000462604 PHF2O75151 1096 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 MED24O75448 989 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 AKAP3O75969 853 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 EYA4O95677 639 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 GGPS1O95749 300 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 AGTP01019 485 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 ITGA4P13612 1032 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 KRT13P13646 458 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 TNFAIP3P21580 790 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 RPA1P27694 616 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 TMOD1P28289 359 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 ATP5DP30049 168 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 TM4SF1P30408 202 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 CHRNA3P32297 505 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 SOX5P35711 763 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 PSMC2P35998 433 aaKnown RBP3.81□□□□□ -1.8
COL8A1-204ENST00000462604 MLLT3P42568 568 aaPredicted RBP3.81□□□□□ -1.8
COL8A1-204ENST00000462604 SCTRP47872 440 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 CASP5P51878 434 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 PMS2P54278 862 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 GALCP54803 685 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 GPSM2P81274 684 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 ARHGAP4P98171 946 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 GABPAQ06546 454 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 KCNA1Q09470 495 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 TRAF1Q13077 416 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 PABPC4Q13310 644 aaKnown RBP eCLIP3.81□□□□□ -1.8
COL8A1-204ENST00000462604 GIT2Q14161 759 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 SLMAPQ14BN4 828 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 TRADDQ15628 312 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 NFIL3Q16649 462 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 PTPROQ16827 1216 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 QRICH1Q2TAL8 776 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 Q4G0T1 1027 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 PRR16Q569H4 304 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 ARSHQ5FYA8 562 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 C6orf118Q5T5N4 469 aa3.81□□□□□ -1.8
COL8A1-204ENST00000462604 SEL1L2Q5TEA6 688 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms