RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 TIMP1P01033 207 aa13.14□□□□□ -0.31
CPNE1-221ENST00000462352 CKBP12277 381 aa13.14□□□□□ -0.31
CPNE1-221ENST00000462352 RAG1P15918 1043 aa13.14□□□□□ -0.31
CPNE1-221ENST00000462352 THPOP40225 353 aa13.14□□□□□ -0.31
CPNE1-221ENST00000462352 CLCN3P51790 818 aa13.14□□□□□ -0.31
CPNE1-221ENST00000462352 POLGP54098 1239 aaPredicted RBP13.14□□□□□ -0.31
CPNE1-221ENST00000462352 RESP18Q5W5W9 173 aa13.14□□□□□ -0.31
CPNE1-221ENST00000462352 ADALQ6DHV7 355 aa13.14□□□□□ -0.31
CPNE1-221ENST00000462352 RPAINQ86UA6 219 aa13.14□□□□□ -0.31
CPNE1-221ENST00000462352 RSPH3Q86UC2 560 aa13.14□□□□□ -0.31
CPNE1-221ENST00000462352 EXOC8Q8IYI6 725 aa13.14□□□□□ -0.31
CPNE1-221ENST00000462352 KIAA0319LQ8IZA0 1049 aa13.14□□□□□ -0.31
CPNE1-221ENST00000462352 LRRC15Q8TF66 581 aa13.14□□□□□ -0.31
CPNE1-221ENST00000462352 SLC7A3Q8WY07 619 aa13.14□□□□□ -0.31
CPNE1-221ENST00000462352 JPH2Q9BR39 696 aaPredicted RBP13.14□□□□□ -0.31
CPNE1-221ENST00000462352 DHX33Q9H6R0 707 aaKnown RBP13.14□□□□□ -0.31
CPNE1-221ENST00000462352 SUGCTQ9HAC7 445 aa13.14□□□□□ -0.31
CPNE1-221ENST00000462352 ARID2Q68CP9 1835 aa13.13□□□□□ -0.31
CPNE1-221ENST00000462352 A0A087X0B3 334 aa13.13□□□□□ -0.31
CPNE1-221ENST00000462352 USO1O60763 962 aaKnown RBP13.13□□□□□ -0.31
CPNE1-221ENST00000462352 CAND2O75155 1236 aa13.13□□□□□ -0.31
CPNE1-221ENST00000462352 CTSHP09668 335 aa13.13□□□□□ -0.31
CPNE1-221ENST00000462352 SELPP16109 830 aa13.13□□□□□ -0.31
CPNE1-221ENST00000462352 KCNA4P22459 653 aa13.13□□□□□ -0.31
CPNE1-221ENST00000462352 TMOD1P28289 359 aa13.13□□□□□ -0.31
CPNE1-221ENST00000462352 CYP2C18P33260 490 aa13.13□□□□□ -0.31
CPNE1-221ENST00000462352 CCL23P55773 120 aa13.13□□□□□ -0.31
CPNE1-221ENST00000462352 MKRN4PQ13434 485 aaPredicted RBP13.13□□□□□ -0.31
CPNE1-221ENST00000462352 DRP2Q13474 957 aa13.13□□□□□ -0.31
CPNE1-221ENST00000462352 EMC2Q15006 297 aa13.13□□□□□ -0.31
CPNE1-221ENST00000462352 ZNF618Q5T7W0 954 aa13.13□□□□□ -0.31
CPNE1-221ENST00000462352 RRAGBQ5VZM2 374 aa13.13□□□□□ -0.31
CPNE1-221ENST00000462352 TRAF7Q6Q0C0 670 aa13.13□□□□□ -0.31
CPNE1-221ENST00000462352 PADI6Q6TGC4 694 aa13.13□□□□□ -0.31
CPNE1-221ENST00000462352 MTRQ99707 1265 aa13.13□□□□□ -0.31
CPNE1-221ENST00000462352 PANK2Q9BZ23 570 aa13.13□□□□□ -0.31
CPNE1-221ENST00000462352 WNT8AQ9H1J5 351 aa13.13□□□□□ -0.31
CPNE1-221ENST00000462352 ATP6V0A4Q9HBG4 840 aa13.13□□□□□ -0.31
CPNE1-221ENST00000462352 XPNPEP1Q9NQW7 623 aa13.13□□□□□ -0.31
CPNE1-221ENST00000462352 BLOC1S4Q9NUP1 217 aa13.13□□□□□ -0.31
CPNE1-221ENST00000462352 RPLP2P05387 115 aaKnown RBP13.12□□□□□ -0.31
CPNE1-221ENST00000462352 SSBP05455 408 aaKnown RBP eCLIP13.12□□□□□ -0.31
CPNE1-221ENST00000462352 IQCF3P0C7M6 154 aa13.12□□□□□ -0.31
CPNE1-221ENST00000462352 PLA2G4BP0C869 781 aa13.12□□□□□ -0.31
CPNE1-221ENST00000462352 CMA1P23946 247 aa13.12□□□□□ -0.31
CPNE1-221ENST00000462352 DNM2P50570 870 aa13.12□□□□□ -0.31
CPNE1-221ENST00000462352 TMEM62Q0P6H9 643 aa13.12□□□□□ -0.31
CPNE1-221ENST00000462352 MFSD5Q6N075 450 aa13.12□□□□□ -0.31
CPNE1-221ENST00000462352 CCDC73Q6ZRK6 1079 aa13.12□□□□□ -0.31
CPNE1-221ENST00000462352 LRRC8DQ7L1W4 858 aa13.12□□□□□ -0.31
CPNE1-221ENST00000462352 NME8Q8N427 588 aa13.12□□□□□ -0.31
CPNE1-221ENST00000462352 PDILTQ8N807 584 aa13.12□□□□□ -0.31
CPNE1-221ENST00000462352 SYT2Q8N9I0 419 aaPredicted RBP13.12□□□□□ -0.31
CPNE1-221ENST00000462352 RAD54LQ92698 747 aa13.12□□□□□ -0.31
CPNE1-221ENST00000462352 BADQ92934 168 aa13.12□□□□□ -0.31
CPNE1-221ENST00000462352 TMEM143Q96AN5 459 aa13.12□□□□□ -0.31
CPNE1-221ENST00000462352 SCLYQ96I15 445 aa13.12□□□□□ -0.31
CPNE1-221ENST00000462352 MAP7D2Q96T17 732 aa13.12□□□□□ -0.31
CPNE1-221ENST00000462352 FAM13BQ9NYF5 915 aa13.12□□□□□ -0.31
CPNE1-221ENST00000462352 STK17AQ9UEE5 414 aa13.12□□□□□ -0.31
CPNE1-221ENST00000462352 AKT3Q9Y243 479 aa13.12□□□□□ -0.31
CPNE1-221ENST00000462352 TNRC18O15417 2968 aaPredicted RBP13.12□□□□□ -0.31
CPNE1-221ENST00000462352 A0A1W2PQ27 194 aa13.11□□□□□ -0.31
CPNE1-221ENST00000462352 A0A1W2PQ64 194 aa13.11□□□□□ -0.31
CPNE1-221ENST00000462352 A0A1W2PQD8 194 aa13.11□□□□□ -0.31
CPNE1-221ENST00000462352 RSPH10B2B2RC85 870 aa13.11□□□□□ -0.31
CPNE1-221ENST00000462352 GAS2O43903 313 aaKnown RBP13.11□□□□□ -0.31
CPNE1-221ENST00000462352 VTNP04004 478 aa13.11□□□□□ -0.31
CPNE1-221ENST00000462352 RSPH10BP0C881 870 aa13.11□□□□□ -0.31
CPNE1-221ENST00000462352 CYP11B2P19099 503 aa13.11□□□□□ -0.31
CPNE1-221ENST00000462352 STAT6P42226 847 aa13.11□□□□□ -0.31
CPNE1-221ENST00000462352 SLC12A3P55017 1021 aa13.11□□□□□ -0.31
CPNE1-221ENST00000462352 MRPS6P82932 125 aaKnown RBP13.11□□□□□ -0.31
CPNE1-221ENST00000462352 MGAT3Q09327 533 aa13.11□□□□□ -0.31
CPNE1-221ENST00000462352 MCM6Q14566 821 aa13.11□□□□□ -0.31
CPNE1-221ENST00000462352 TPRNQ4KMQ1 711 aa13.11□□□□□ -0.31
CPNE1-221ENST00000462352 NAALADL2Q58DX5 795 aa13.11□□□□□ -0.31
CPNE1-221ENST00000462352 FAM26DQ5JW98 314 aa13.11□□□□□ -0.31
CPNE1-221ENST00000462352 IER5Q5VY09 327 aa13.11□□□□□ -0.31
CPNE1-221ENST00000462352 RINT1Q6NUQ1 792 aa13.11□□□□□ -0.31
CPNE1-221ENST00000462352 MAEAQ7L5Y9 396 aa13.11□□□□□ -0.31
CPNE1-221ENST00000462352 TMEM199Q8N511 208 aa13.11□□□□□ -0.31
CPNE1-221ENST00000462352 MCPH1Q8NEM0 835 aa13.11□□□□□ -0.31
CPNE1-221ENST00000462352 TCP11Q8WWU5 503 aa13.11□□□□□ -0.31
CPNE1-221ENST00000462352 LARP4BQ92615 738 aaKnown RBP13.11□□□□□ -0.31
CPNE1-221ENST00000462352 PPP1R16BQ96T49 567 aa13.11□□□□□ -0.31
CPNE1-221ENST00000462352 RUSC1Q9BVN2 902 aa13.11□□□□□ -0.31
CPNE1-221ENST00000462352 SUCLA2Q9P2R7 463 aaPredicted RBP13.11□□□□□ -0.31
CPNE1-221ENST00000462352 CDY2AQ9Y6F7 541 aa13.11□□□□□ -0.31
CPNE1-221ENST00000462352 PDE4DIPQ5VU43 2346 aa13.11□□□□□ -0.31
CPNE1-221ENST00000462352 LTBP2Q14767 1821 aa13.11□□□□□ -0.31
CPNE1-221ENST00000462352 EVPLQ92817 2033 aa13.1□□□□□ -0.31
CPNE1-221ENST00000462352 LOXHD1Q8IVV2 1947 aa13.1□□□□□ -0.31
CPNE1-221ENST00000462352 CEP290O15078 2479 aa13.1□□□□□ -0.31
CPNE1-221ENST00000462352 A0A1B0GVL5 298 aa13.1□□□□□ -0.31
CPNE1-221ENST00000462352 H0YGN5 161 aa13.1□□□□□ -0.31
CPNE1-221ENST00000462352 M0QZ92 97 aa13.1□□□□□ -0.31
CPNE1-221ENST00000462352 GPR32O75388 356 aa13.1□□□□□ -0.31
CPNE1-221ENST00000462352 CHRNA1P02708 482 aa13.1□□□□□ -0.31
CPNE1-221ENST00000462352 PFKFB1P16118 471 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms