RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 ZFP64Q9NPA5 681 aa5.55□□□□□ -1.52
CSMD3-205ENST00000462254 SLC5A4Q9NY91 659 aa5.55□□□□□ -1.52
CSMD3-205ENST00000462254 GMIPQ9P107 970 aa5.55□□□□□ -1.52
CSMD3-205ENST00000462254 GTF2IRD1Q9UHL9 959 aa5.55□□□□□ -1.52
CSMD3-205ENST00000462254 CEP131Q9UPN4 1083 aa5.55□□□□□ -1.52
CSMD3-205ENST00000462254 SLC12A7Q9Y666 1083 aa5.55□□□□□ -1.52
CSMD3-205ENST00000462254 MYH2Q9UKX2 1941 aa5.54□□□□□ -1.52
CSMD3-205ENST00000462254 ECM29Q5VYK3 1845 aa5.54□□□□□ -1.52
CSMD3-205ENST00000462254 KLRG2A4D1S0 409 aaPredicted RBP5.54□□□□□ -1.52
CSMD3-205ENST00000462254 MEIS3P2A8K0S8 358 aa5.54□□□□□ -1.52
CSMD3-205ENST00000462254 EYA2O00167 538 aa5.54□□□□□ -1.52
CSMD3-205ENST00000462254 CIAO1O76071 339 aa5.54□□□□□ -1.52
CSMD3-205ENST00000462254 ZBTB7AO95365 584 aa5.54□□□□□ -1.52
CSMD3-205ENST00000462254 CBX7O95931 251 aa5.54□□□□□ -1.52
CSMD3-205ENST00000462254 GUCY2CP25092 1073 aa5.54□□□□□ -1.52
CSMD3-205ENST00000462254 POLR2BP30876 1174 aaKnown RBP5.54□□□□□ -1.52
CSMD3-205ENST00000462254 TFCP2Q12800 502 aa5.54□□□□□ -1.52
CSMD3-205ENST00000462254 G3BP1Q13283 466 aaKnown RBP eCLIP5.54□□□□□ -1.52
CSMD3-205ENST00000462254 NKPD1Q17RQ9 610 aa5.54□□□□□ -1.52
CSMD3-205ENST00000462254 LRRFIP1Q32MZ4 808 aaKnown RBP5.54□□□□□ -1.52
CSMD3-205ENST00000462254 SLC10A6Q3KNW5 377 aa5.54□□□□□ -1.52
CSMD3-205ENST00000462254 ACBD5Q5T8D3 534 aaPredicted RBP5.54□□□□□ -1.52
CSMD3-205ENST00000462254 RUFY4Q6ZNE9 571 aa5.54□□□□□ -1.52
CSMD3-205ENST00000462254 ARHGAP27Q6ZUM4 889 aa5.54□□□□□ -1.52
CSMD3-205ENST00000462254 STRA8Q7Z7C7 330 aa5.54□□□□□ -1.52
CSMD3-205ENST00000462254 PPM1KQ8N3J5 372 aa5.54□□□□□ -1.52
CSMD3-205ENST00000462254 TAB3Q8N5C8 712 aaPredicted RBP5.54□□□□□ -1.52
CSMD3-205ENST00000462254 VGLL2Q8N8G2 317 aa5.54□□□□□ -1.52
CSMD3-205ENST00000462254 WDR66Q8TBY9 1149 aa5.54□□□□□ -1.52
CSMD3-205ENST00000462254 NETO1Q8TDF5 533 aa5.54□□□□□ -1.52
CSMD3-205ENST00000462254 E2F7Q96AV8 911 aa5.54□□□□□ -1.52
CSMD3-205ENST00000462254 ATG4CQ96DT6 458 aa5.54□□□□□ -1.52
CSMD3-205ENST00000462254 MTMR8Q96EF0 704 aa5.54□□□□□ -1.52
CSMD3-205ENST00000462254 AASDHPPTQ9NRN7 309 aa5.54□□□□□ -1.52
CSMD3-205ENST00000462254 CCDC39Q9UFE4 941 aa5.54□□□□□ -1.52
CSMD3-205ENST00000462254 INTUQ9ULD6 942 aa5.54□□□□□ -1.52
CSMD3-205ENST00000462254 SPEF1Q9Y4P9 236 aa5.54□□□□□ -1.52
CSMD3-205ENST00000462254 LAMA4Q16363 1823 aa5.53□□□□□ -1.52
CSMD3-205ENST00000462254 ADAMTSL1Q8N6G6 1762 aa5.53□□□□□ -1.52
CSMD3-205ENST00000462254 A0A0U1RQG5 324 aaPredicted RBP5.53□□□□□ -1.52
CSMD3-205ENST00000462254 TBX3O15119 743 aa5.53□□□□□ -1.52
CSMD3-205ENST00000462254 GPR39O43194 453 aa5.53□□□□□ -1.52
CSMD3-205ENST00000462254 UBOX5O94941 541 aa5.53□□□□□ -1.52
CSMD3-205ENST00000462254 NPTXRO95502 500 aa5.53□□□□□ -1.52
CSMD3-205ENST00000462254 F2P00734 622 aa5.53□□□□□ -1.52
CSMD3-205ENST00000462254 CEACAM5P06731 702 aa5.53□□□□□ -1.52
CSMD3-205ENST00000462254 HSP90AA1P07900 732 aaKnown RBP5.53□□□□□ -1.52
CSMD3-205ENST00000462254 COL6A1P12109 1028 aa5.53□□□□□ -1.52
CSMD3-205ENST00000462254 PDE6BP35913 854 aa5.53□□□□□ -1.52
CSMD3-205ENST00000462254 CD96P40200 585 aa5.53□□□□□ -1.52
CSMD3-205ENST00000462254 IL15P40933 162 aaPredicted RBP5.53□□□□□ -1.52
CSMD3-205ENST00000462254 CCNFP41002 786 aa5.53□□□□□ -1.52
CSMD3-205ENST00000462254 ITKQ08881 620 aa5.53□□□□□ -1.52
CSMD3-205ENST00000462254 BNIP3Q12983 259 aa5.53□□□□□ -1.52
CSMD3-205ENST00000462254 GRAMD1BQ3KR37 738 aa5.53□□□□□ -1.52
CSMD3-205ENST00000462254 INO80DQ53TQ3 878 aaPredicted RBP5.53□□□□□ -1.52
CSMD3-205ENST00000462254 SFRP5Q5T4F7 317 aa5.53□□□□□ -1.52
CSMD3-205ENST00000462254 WDR78Q5VTH9 848 aa5.53□□□□□ -1.52
CSMD3-205ENST00000462254 LDHAL6AQ6ZMR3 332 aa5.53□□□□□ -1.52
CSMD3-205ENST00000462254 ZBTB46Q86UZ6 589 aa5.53□□□□□ -1.52
CSMD3-205ENST00000462254 ERC1Q8IUD2 1116 aa5.53□□□□□ -1.52
CSMD3-205ENST00000462254 ANKRD18AQ8IVF6 992 aa5.53□□□□□ -1.52
CSMD3-205ENST00000462254 SPACA3Q8IXA5 215 aa5.53□□□□□ -1.52
CSMD3-205ENST00000462254 PHACTR4Q8IZ21 702 aa5.53□□□□□ -1.52
CSMD3-205ENST00000462254 SPICE1Q8N0Z3 855 aa5.53□□□□□ -1.52
CSMD3-205ENST00000462254 AHI1Q8N157 1196 aa5.53□□□□□ -1.52
CSMD3-205ENST00000462254 TMEM40Q8WWA1 233 aa5.53□□□□□ -1.52
CSMD3-205ENST00000462254 EAF2Q96CJ1 260 aaPredicted RBP5.53□□□□□ -1.52
CSMD3-205ENST00000462254 CCDC74BQ96LY2 380 aa5.53□□□□□ -1.52
CSMD3-205ENST00000462254 CLUHP3Q96NS8 147 aa5.53□□□□□ -1.52
CSMD3-205ENST00000462254 CDC5LQ99459 802 aaKnown RBP5.53□□□□□ -1.52
CSMD3-205ENST00000462254 SMAD5Q99717 465 aaKnown RBP5.53□□□□□ -1.52
CSMD3-205ENST00000462254 MTA3Q9BTC8 594 aa5.53□□□□□ -1.52
CSMD3-205ENST00000462254 BRIP1Q9BX63 1249 aa5.53□□□□□ -1.52
CSMD3-205ENST00000462254 MRPL4Q9BYD3 311 aaKnown RBP5.53□□□□□ -1.52
CSMD3-205ENST00000462254 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.53□□□□□ -1.52
CSMD3-205ENST00000462254 MTFR1LQ9H019 292 aa5.53□□□□□ -1.52
CSMD3-205ENST00000462254 PUS7LQ9H0K6 701 aaKnown RBP5.53□□□□□ -1.52
CSMD3-205ENST00000462254 MKNK2Q9HBH9 465 aa5.53□□□□□ -1.52
CSMD3-205ENST00000462254 FPGT-TNNI3KV9GXZ4 949 aa5.53□□□□□ -1.52
CSMD3-205ENST00000462254 FOCADQ5VW36 1801 aa5.53□□□□□ -1.52
CSMD3-205ENST00000462254 SNED1Q8TER0 1413 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 A0A1B0GUL7 405 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 SNAP23O00161 211 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 RGS13O14921 159 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 SUSD5O60279 629 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 BRINP1O60477 761 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 LRRN2O75325 713 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 ABLIM3O94929 683 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 PRNPP04156 253 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 IFIT2P09913 472 aaKnown RBP5.52□□□□□ -1.53
CSMD3-205ENST00000462254 SRGNP10124 158 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 ACRP10323 421 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 GSPT1P15170 499 aaKnown RBP5.52□□□□□ -1.53
CSMD3-205ENST00000462254 RAG1P15918 1043 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 MAN1A1P33908 653 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 IGHMBP2P38935 993 aaKnown RBP5.52□□□□□ -1.53
CSMD3-205ENST00000462254 PDE1AP54750 535 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 CHRNDQ07001 517 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 GRAPQ13588 217 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms