RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 NPAS4Q8IUM7 802 aa10.35□□□□□ -0.75
BRCA1-207ENST00000461798 CMTR2Q8IYT2 770 aaKnown RBP10.35□□□□□ -0.75
BRCA1-207ENST00000461798 IL27Q8NEV9 243 aa10.35□□□□□ -0.75
BRCA1-207ENST00000461798 UIMC1Q96RL1 719 aa10.35□□□□□ -0.75
BRCA1-207ENST00000461798 UHRF1Q96T88 793 aaPredicted RBP10.35□□□□□ -0.75
BRCA1-207ENST00000461798 LARP6Q9BRS8 491 aaKnown RBP10.35□□□□□ -0.75
BRCA1-207ENST00000461798 PLVAPQ9BX97 442 aa10.35□□□□□ -0.75
BRCA1-207ENST00000461798 LMAN2LQ9H0V9 348 aa10.35□□□□□ -0.75
BRCA1-207ENST00000461798 TMX1Q9H3N1 280 aa10.35□□□□□ -0.75
BRCA1-207ENST00000461798 CDHR5Q9HBB8 845 aa10.35□□□□□ -0.75
BRCA1-207ENST00000461798 ERVK-5Q9HDB9 667 aa10.35□□□□□ -0.75
BRCA1-207ENST00000461798 NRBP2Q9NSY0 501 aa10.35□□□□□ -0.75
BRCA1-207ENST00000461798 NOC2LQ9Y3T9 749 aaKnown RBP10.35□□□□□ -0.75
BRCA1-207ENST00000461798 VCANP13611 3396 aa10.35□□□□□ -0.75
BRCA1-207ENST00000461798 SPTBN5Q9NRC6 3674 aaKnown RBP10.35□□□□□ -0.75
BRCA1-207ENST00000461798 TTC3P53804 2025 aa10.34□□□□□ -0.75
BRCA1-207ENST00000461798 ADGRA3Q8IWK6 1321 aa10.34□□□□□ -0.75
BRCA1-207ENST00000461798 STK36Q9NRP7 1315 aa10.34□□□□□ -0.75
BRCA1-207ENST00000461798 GPR182O15218 404 aa10.34□□□□□ -0.75
BRCA1-207ENST00000461798 EIF5BO60841 1220 aaKnown RBP10.34□□□□□ -0.75
BRCA1-207ENST00000461798 GAS7O60861 476 aa10.34□□□□□ -0.75
BRCA1-207ENST00000461798 GPR32O75388 356 aa10.34□□□□□ -0.75
BRCA1-207ENST00000461798 RPS6KA5O75582 802 aa10.34□□□□□ -0.75
BRCA1-207ENST00000461798 KCNQ1P51787 676 aa10.34□□□□□ -0.75
BRCA1-207ENST00000461798 FAM189BP81408 668 aa10.34□□□□□ -0.75
BRCA1-207ENST00000461798 STK3Q13188 491 aa10.34□□□□□ -0.75
BRCA1-207ENST00000461798 BTG3Q14201 252 aaPredicted RBP10.34□□□□□ -0.75
BRCA1-207ENST00000461798 ANKRD1Q15327 319 aa10.34□□□□□ -0.75
BRCA1-207ENST00000461798 TARBP2Q15633 366 aaKnown RBP10.34□□□□□ -0.75
BRCA1-207ENST00000461798 TIGD5Q53EQ6 642 aa10.34□□□□□ -0.75
BRCA1-207ENST00000461798 NAALADL2Q58DX5 795 aa10.34□□□□□ -0.75
BRCA1-207ENST00000461798 LRCH2Q5VUJ6 765 aa10.34□□□□□ -0.75
BRCA1-207ENST00000461798 KRT25Q7Z3Z0 450 aa10.34□□□□□ -0.75
BRCA1-207ENST00000461798 CKAP2LQ8IYA6 745 aa10.34□□□□□ -0.75
BRCA1-207ENST00000461798 TMEM40Q8WWA1 233 aa10.34□□□□□ -0.75
BRCA1-207ENST00000461798 AIFM3Q96NN9 605 aa10.34□□□□□ -0.75
BRCA1-207ENST00000461798 PHF20Q9BVI0 1012 aa10.34□□□□□ -0.75
BRCA1-207ENST00000461798 TEKT3Q9BXF9 490 aa10.34□□□□□ -0.75
BRCA1-207ENST00000461798 SLKQ9H2G2 1235 aaPredicted RBP10.34□□□□□ -0.75
BRCA1-207ENST00000461798 UNC45AQ9H3U1 944 aa10.34□□□□□ -0.75
BRCA1-207ENST00000461798 UBE2ZQ9H832 354 aaPredicted RBP10.34□□□□□ -0.75
BRCA1-207ENST00000461798 RGS18Q9NS28 235 aa10.34□□□□□ -0.75
BRCA1-207ENST00000461798 TPCN1Q9ULQ1 816 aa10.34□□□□□ -0.75
BRCA1-207ENST00000461798 ST3GAL5Q9UNP4 418 aa10.34□□□□□ -0.75
BRCA1-207ENST00000461798 STBD1O95210 358 aa10.33□□□□□ -0.76
BRCA1-207ENST00000461798 CTDNEP1O95476 244 aa10.33□□□□□ -0.76
BRCA1-207ENST00000461798 TDP2O95551 362 aa10.33□□□□□ -0.76
BRCA1-207ENST00000461798 OATP04181 439 aa10.33□□□□□ -0.76
BRCA1-207ENST00000461798 SARSP49591 514 aaKnown RBP10.33□□□□□ -0.76
BRCA1-207ENST00000461798 NFX1Q12986 1120 aaKnown RBP10.33□□□□□ -0.76
BRCA1-207ENST00000461798 DSC3Q14574 896 aa10.33□□□□□ -0.76
BRCA1-207ENST00000461798 NONOQ15233 471 aaKnown RBP eCLIP10.33□□□□□ -0.76
BRCA1-207ENST00000461798 LEXMQ3ZCV2 418 aa10.33□□□□□ -0.76
BRCA1-207ENST00000461798 PPP4R3AQ6IN85 833 aa10.33□□□□□ -0.76
BRCA1-207ENST00000461798 EFCAB12Q6NXP0 572 aa10.33□□□□□ -0.76
BRCA1-207ENST00000461798 SLC24A5Q71RS6 500 aa10.33□□□□□ -0.76
BRCA1-207ENST00000461798 METTL13Q8N6R0 699 aa10.33□□□□□ -0.76
BRCA1-207ENST00000461798 BANK1Q8NDB2 785 aa10.33□□□□□ -0.76
BRCA1-207ENST00000461798 ETNPPLQ8TBG4 499 aa10.33□□□□□ -0.76
BRCA1-207ENST00000461798 P2RX5Q93086 422 aa10.33□□□□□ -0.76
BRCA1-207ENST00000461798 C11orf84Q9BUA3 381 aaPredicted RBP10.33□□□□□ -0.76
BRCA1-207ENST00000461798 NIFKQ9BYG3 293 aaKnown RBP10.33□□□□□ -0.76
BRCA1-207ENST00000461798 ADAMTS10Q9H324 1103 aa10.33□□□□□ -0.76
BRCA1-207ENST00000461798 C1orf112Q9NSG2 853 aa10.33□□□□□ -0.76
BRCA1-207ENST00000461798 SAMM50Q9Y512 469 aa10.33□□□□□ -0.76
BRCA1-207ENST00000461798 IGKV6-21A0A0C4DH24 114 aa10.32□□□□□ -0.76
BRCA1-207ENST00000461798 C9IYK1 514 aa10.32□□□□□ -0.76
BRCA1-207ENST00000461798 GRM6O15303 877 aa10.32□□□□□ -0.76
BRCA1-207ENST00000461798 NCK2O43639 380 aa10.32□□□□□ -0.76
BRCA1-207ENST00000461798 MGEA5O60502 916 aa10.32□□□□□ -0.76
BRCA1-207ENST00000461798 GCFC2P16383 781 aaKnown RBP10.32□□□□□ -0.76
BRCA1-207ENST00000461798 XBP1P17861 261 aa10.32□□□□□ -0.76
BRCA1-207ENST00000461798 TMOD1P28289 359 aa10.32□□□□□ -0.76
BRCA1-207ENST00000461798 CTNNB1P35222 781 aa10.32□□□□□ -0.76
BRCA1-207ENST00000461798 AK2P54819 239 aa10.32□□□□□ -0.76
BRCA1-207ENST00000461798 CDC42EP1Q00587 391 aa10.32□□□□□ -0.76
BRCA1-207ENST00000461798 KIZQ2M2Z5 673 aa10.32□□□□□ -0.76
BRCA1-207ENST00000461798 TMEM266Q2M3C6 531 aa10.32□□□□□ -0.76
BRCA1-207ENST00000461798 XKR3Q5GH77 459 aa10.32□□□□□ -0.76
BRCA1-207ENST00000461798 FAM228AQ86W67 206 aa10.32□□□□□ -0.76
BRCA1-207ENST00000461798 NEK9Q8TD19 979 aa10.32□□□□□ -0.76
BRCA1-207ENST00000461798 FAM20AQ96MK3 541 aa10.32□□□□□ -0.76
BRCA1-207ENST00000461798 CEP89Q96ST8 783 aa10.32□□□□□ -0.76
BRCA1-207ENST00000461798 ADAM2Q99965 735 aa10.32□□□□□ -0.76
BRCA1-207ENST00000461798 NSUN3Q9H649 340 aaKnown RBP10.32□□□□□ -0.76
BRCA1-207ENST00000461798 ELAC1Q9H777 363 aaKnown RBP10.32□□□□□ -0.76
BRCA1-207ENST00000461798 KCNMB3Q9NPA1 279 aa10.32□□□□□ -0.76
BRCA1-207ENST00000461798 DDX25Q9UHL0 483 aaKnown RBP10.32□□□□□ -0.76
BRCA1-207ENST00000461798 KCNJ14Q9UNX9 436 aa10.32□□□□□ -0.76
BRCA1-207ENST00000461798 PLAGL2Q9UPG8 496 aa10.32□□□□□ -0.76
BRCA1-207ENST00000461798 GINS2Q9Y248 185 aa10.32□□□□□ -0.76
BRCA1-207ENST00000461798 MRPL42Q9Y6G3 142 aaKnown RBP10.32□□□□□ -0.76
BRCA1-207ENST00000461798 BDP1A6H8Y1 2624 aa10.32□□□□□ -0.76
BRCA1-207ENST00000461798 SIP14410 1827 aa10.31□□□□□ -0.76
BRCA1-207ENST00000461798 CCDC194A0A1B0GVG4 234 aa10.31□□□□□ -0.76
BRCA1-207ENST00000461798 TBX3O15119 743 aa10.31□□□□□ -0.76
BRCA1-207ENST00000461798 VTNP04004 478 aa10.31□□□□□ -0.76
BRCA1-207ENST00000461798 FDPSP14324 419 aaKnown RBP10.31□□□□□ -0.76
BRCA1-207ENST00000461798 EIF4BP23588 611 aaKnown RBP10.31□□□□□ -0.76
BRCA1-207ENST00000461798 CLCN3P51790 818 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms