RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 MKS1Q9NXB0 559 aa4.02□□□□□ -1.77
HDAC6-212ENST00000461608 ZIM2Q9NZV7 527 aa4.02□□□□□ -1.77
HDAC6-212ENST00000461608 MSRAQ9UJ68 235 aa4.02□□□□□ -1.77
HDAC6-212ENST00000461608 PNMA8BQ9ULN7 279 aaPredicted RBP4.02□□□□□ -1.77
HDAC6-212ENST00000461608 GIT1Q9Y2X7 761 aa4.02□□□□□ -1.77
HDAC6-212ENST00000461608 NUDT19A8MXV4 375 aa4.01□□□□□ -1.77
HDAC6-212ENST00000461608 KCNK3O14649 394 aa4.01□□□□□ -1.77
HDAC6-212ENST00000461608 MAFO75444 373 aaPredicted RBP4.01□□□□□ -1.77
HDAC6-212ENST00000461608 PRLP01236 227 aa4.01□□□□□ -1.77
HDAC6-212ENST00000461608 RBP3P10745 1247 aa4.01□□□□□ -1.77
HDAC6-212ENST00000461608 PI3P19957 117 aa4.01□□□□□ -1.77
HDAC6-212ENST00000461608 ENPP1P22413 925 aa4.01□□□□□ -1.77
HDAC6-212ENST00000461608 IARSP41252 1262 aaKnown RBP4.01□□□□□ -1.77
HDAC6-212ENST00000461608 ROM1Q03395 351 aa4.01□□□□□ -1.77
HDAC6-212ENST00000461608 DBPQ10586 325 aaPredicted RBP4.01□□□□□ -1.77
HDAC6-212ENST00000461608 GJC2Q5T442 439 aaPredicted RBP4.01□□□□□ -1.77
HDAC6-212ENST00000461608 FAM102BQ5T8I3 360 aa4.01□□□□□ -1.77
HDAC6-212ENST00000461608 FSTL4Q6MZW2 842 aa4.01□□□□□ -1.77
HDAC6-212ENST00000461608 PNMA8AQ86V59 439 aaPredicted RBP4.01□□□□□ -1.77
HDAC6-212ENST00000461608 CXorf67Q86X51 503 aaPredicted RBP4.01□□□□□ -1.77
HDAC6-212ENST00000461608 TCEAL8Q8IYN2 117 aa4.01□□□□□ -1.77
HDAC6-212ENST00000461608 MYO1HQ8N1T3 1032 aa4.01□□□□□ -1.77
HDAC6-212ENST00000461608 HIPK4Q8NE63 616 aa4.01□□□□□ -1.77
HDAC6-212ENST00000461608 FEZF2Q8TBJ5 459 aa4.01□□□□□ -1.77
HDAC6-212ENST00000461608 LMBR1Q8WVP7 490 aa4.01□□□□□ -1.77
HDAC6-212ENST00000461608 ASB15Q8WXK1 588 aa4.01□□□□□ -1.77
HDAC6-212ENST00000461608 CPA5Q8WXQ8 436 aa4.01□□□□□ -1.77
HDAC6-212ENST00000461608 RPGRQ92834 1020 aaKnown RBP4.01□□□□□ -1.77
HDAC6-212ENST00000461608 FERMT2Q96AC1 680 aa4.01□□□□□ -1.77
HDAC6-212ENST00000461608 RAX2Q96IS3 184 aa4.01□□□□□ -1.77
HDAC6-212ENST00000461608 CCDC8Q9H0W5 538 aaPredicted RBP4.01□□□□□ -1.77
HDAC6-212ENST00000461608 ARHGAP28Q9P2N2 729 aa4.01□□□□□ -1.77
HDAC6-212ENST00000461608 ZNF180Q9UJW8 692 aa4.01□□□□□ -1.77
HDAC6-212ENST00000461608 TELO2Q9Y4R8 837 aa4.01□□□□□ -1.77
HDAC6-212ENST00000461608 TNKSO95271 1327 aa4□□□□□ -1.77
HDAC6-212ENST00000461608 FAM90A27PA6NNH2 459 aa4□□□□□ -1.77
HDAC6-212ENST00000461608 GOLGA8AA7E2F4 631 aa4□□□□□ -1.77
HDAC6-212ENST00000461608 GOLGA8BA8MQT2 603 aa4□□□□□ -1.77
HDAC6-212ENST00000461608 K7ESM1 405 aa4□□□□□ -1.77
HDAC6-212ENST00000461608 OVOL3O00110 214 aa4□□□□□ -1.77
HDAC6-212ENST00000461608 PRC1O43663 620 aa4□□□□□ -1.77
HDAC6-212ENST00000461608 MT-CO1P00395 513 aa4□□□□□ -1.77
HDAC6-212ENST00000461608 LTFP02788 710 aa4□□□□□ -1.77
HDAC6-212ENST00000461608 ENO2P09104 434 aaPredicted RBP4□□□□□ -1.77
HDAC6-212ENST00000461608 PTGS1P23219 599 aa4□□□□□ -1.77
HDAC6-212ENST00000461608 PTX3P26022 381 aaPredicted RBP4□□□□□ -1.77
HDAC6-212ENST00000461608 RAB27AP51159 221 aa4□□□□□ -1.77
HDAC6-212ENST00000461608 SLC5A3P53794 718 aa4□□□□□ -1.77
HDAC6-212ENST00000461608 EPHB3P54753 998 aa4□□□□□ -1.77
HDAC6-212ENST00000461608 TBX4P57082 545 aa4□□□□□ -1.77
HDAC6-212ENST00000461608 YBX1P67809 324 aaKnown RBP4□□□□□ -1.77
HDAC6-212ENST00000461608 NKX3-2P78367 333 aa4□□□□□ -1.77
HDAC6-212ENST00000461608 MRPS9P82933 396 aaKnown RBP4□□□□□ -1.77
HDAC6-212ENST00000461608 ALDH6A1Q02252 535 aaKnown RBP4□□□□□ -1.77
HDAC6-212ENST00000461608 TARBP2Q15633 366 aaKnown RBP4□□□□□ -1.77
HDAC6-212ENST00000461608 GFOD2Q3B7J2 385 aa4□□□□□ -1.77
HDAC6-212ENST00000461608 CCDC178Q5BJE1 867 aa4□□□□□ -1.77
HDAC6-212ENST00000461608 CD276Q5ZPR3 534 aa4□□□□□ -1.77
HDAC6-212ENST00000461608 VASNQ6EMK4 673 aa4□□□□□ -1.77
HDAC6-212ENST00000461608 RTN4RL1Q86UN2 441 aaPredicted RBP4□□□□□ -1.77
HDAC6-212ENST00000461608 ARRDC4Q8NCT1 418 aa4□□□□□ -1.77
HDAC6-212ENST00000461608 CLEC4DQ8WXI8 215 aa4□□□□□ -1.77
HDAC6-212ENST00000461608 ALG3Q92685 438 aa4□□□□□ -1.77
HDAC6-212ENST00000461608 FAXDC2Q96IV6 333 aa4□□□□□ -1.77
HDAC6-212ENST00000461608 PAWRQ96IZ0 340 aaKnown RBP4□□□□□ -1.77
HDAC6-212ENST00000461608 GBP4Q96PP9 640 aa4□□□□□ -1.77
HDAC6-212ENST00000461608 TMEM209Q96SK2 561 aa4□□□□□ -1.77
HDAC6-212ENST00000461608 EPB41L4AQ9HCS5 686 aaPredicted RBP4□□□□□ -1.77
HDAC6-212ENST00000461608 TOPORSQ9NS56 1045 aaPredicted RBP4□□□□□ -1.77
HDAC6-212ENST00000461608 CCM2LQ9NUG4 571 aaPredicted RBP4□□□□□ -1.77
HDAC6-212ENST00000461608 INVSQ9Y283 1065 aa4□□□□□ -1.77
HDAC6-212ENST00000461608 ANKRD6Q9Y2G4 727 aa4□□□□□ -1.77
HDAC6-212ENST00000461608 LUC7L2Q9Y383 392 aaKnown RBP4□□□□□ -1.77
HDAC6-212ENST00000461608 KLHL33A6NCF5 533 aa3.99□□□□□ -1.77
HDAC6-212ENST00000461608 RASSF10A6NK89 507 aa3.99□□□□□ -1.77
HDAC6-212ENST00000461608 GOLGA6L22H0YM25 854 aa3.99□□□□□ -1.77
HDAC6-212ENST00000461608 FZD9O00144 591 aa3.99□□□□□ -1.77
HDAC6-212ENST00000461608 ERC2O15083 957 aa3.99□□□□□ -1.77
HDAC6-212ENST00000461608 CAND2O75155 1236 aa3.99□□□□□ -1.77
HDAC6-212ENST00000461608 CYP7B1O75881 506 aa3.99□□□□□ -1.77
HDAC6-212ENST00000461608 MMEP08473 750 aa3.99□□□□□ -1.77
HDAC6-212ENST00000461608 NCAM1P13591 858 aa3.99□□□□□ -1.77
HDAC6-212ENST00000461608 ZSCAN20P17040 1043 aaPredicted RBP3.99□□□□□ -1.77
HDAC6-212ENST00000461608 CYP2C19P33261 490 aa3.99□□□□□ -1.77
HDAC6-212ENST00000461608 GPR15P49685 360 aa3.99□□□□□ -1.77
HDAC6-212ENST00000461608 HMGA2P52926 109 aa3.99□□□□□ -1.77
HDAC6-212ENST00000461608 MANFP55145 182 aaKnown RBP3.99□□□□□ -1.77
HDAC6-212ENST00000461608 BCAR1P56945 870 aa3.99□□□□□ -1.77
HDAC6-212ENST00000461608 ZXDAP98168 799 aa3.99□□□□□ -1.77
HDAC6-212ENST00000461608 KRTAP1-1Q07627 177 aa3.99□□□□□ -1.77
HDAC6-212ENST00000461608 EFEMP1Q12805 493 aa3.99□□□□□ -1.77
HDAC6-212ENST00000461608 MAP3K12Q12852 859 aa3.99□□□□□ -1.77
HDAC6-212ENST00000461608 SEC23AQ15436 765 aa3.99□□□□□ -1.77
HDAC6-212ENST00000461608 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.99□□□□□ -1.77
HDAC6-212ENST00000461608 ANO4Q32M45 955 aa3.99□□□□□ -1.77
HDAC6-212ENST00000461608 SLFN12LQ6IEE8 588 aa3.99□□□□□ -1.77
HDAC6-212ENST00000461608 KIAA1841Q6NSI8 718 aa3.99□□□□□ -1.77
HDAC6-212ENST00000461608 TEPPQ6URK8 271 aa3.99□□□□□ -1.77
HDAC6-212ENST00000461608 FRMD5Q7Z6J6 570 aa3.99□□□□□ -1.77
HDAC6-212ENST00000461608 WDR75Q8IWA0 830 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms