RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 SQORQ9Y6N5 450 aa11.84□□□□□ -0.51
TRAPPC12-213ENST00000461577 KDM3AQ9Y4C1 1321 aa11.84□□□□□ -0.51
TRAPPC12-213ENST00000461577 ARID2Q68CP9 1835 aa11.83□□□□□ -0.51
TRAPPC12-213ENST00000461577 MAFO75444 373 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC12-213ENST00000461577 RPS6KA5O75582 802 aa11.83□□□□□ -0.52
TRAPPC12-213ENST00000461577 DNAJB2P25686 324 aa11.83□□□□□ -0.52
TRAPPC12-213ENST00000461577 CD52P31358 61 aa11.83□□□□□ -0.52
TRAPPC12-213ENST00000461577 PBX2P40425 430 aa11.83□□□□□ -0.52
TRAPPC12-213ENST00000461577 RFC5P40937 340 aa11.83□□□□□ -0.52
TRAPPC12-213ENST00000461577 FXR2P51116 673 aaKnown RBP eCLIP11.83□□□□□ -0.52
TRAPPC12-213ENST00000461577 RABGGTBP53611 331 aa11.83□□□□□ -0.52
TRAPPC12-213ENST00000461577 CRYBB1P53674 252 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC12-213ENST00000461577 POLGP54098 1239 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC12-213ENST00000461577 NLRP11P59045 1033 aaKnown RBP11.83□□□□□ -0.52
TRAPPC12-213ENST00000461577 DEFB103AP81534 67 aa11.83□□□□□ -0.52
TRAPPC12-213ENST00000461577 PAK2Q13177 524 aa11.83□□□□□ -0.52
TRAPPC12-213ENST00000461577 KIZQ2M2Z5 673 aa11.83□□□□□ -0.52
TRAPPC12-213ENST00000461577 HAUS3Q68CZ6 603 aa11.83□□□□□ -0.52
TRAPPC12-213ENST00000461577 DTHD1Q6ZMT9 781 aa11.83□□□□□ -0.52
TRAPPC12-213ENST00000461577 HERC6Q8IVU3 1022 aa11.83□□□□□ -0.52
TRAPPC12-213ENST00000461577 MYOCDQ8IZQ8 938 aa11.83□□□□□ -0.52
TRAPPC12-213ENST00000461577 DEFB123Q8N688 67 aa11.83□□□□□ -0.52
TRAPPC12-213ENST00000461577 LINC01465Q8N7H1 131 aa11.83□□□□□ -0.52
TRAPPC12-213ENST00000461577 SLC7A3Q8WY07 619 aa11.83□□□□□ -0.52
TRAPPC12-213ENST00000461577 SCLT1Q96NL6 688 aa11.83□□□□□ -0.52
TRAPPC12-213ENST00000461577 CEP89Q96ST8 783 aa11.83□□□□□ -0.52
TRAPPC12-213ENST00000461577 OSMRQ99650 979 aa11.83□□□□□ -0.52
TRAPPC12-213ENST00000461577 HSD17B14Q9BPX1 270 aa11.83□□□□□ -0.52
TRAPPC12-213ENST00000461577 POLR3CQ9BUI4 534 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC12-213ENST00000461577 ANKEF1Q9NU02 776 aa11.83□□□□□ -0.52
TRAPPC12-213ENST00000461577 LRWD1Q9UFC0 647 aa11.83□□□□□ -0.52
TRAPPC12-213ENST00000461577 PCDHA11Q9Y5I1 949 aa11.83□□□□□ -0.52
TRAPPC12-213ENST00000461577 PTPRSQ13332 1948 aa11.83□□□□□ -0.52
TRAPPC12-213ENST00000461577 TMEM265A0A087WTH1 108 aa11.82□□□□□ -0.52
TRAPPC12-213ENST00000461577 RBAK-RBAKDNI3L0D1 243 aa11.82□□□□□ -0.52
TRAPPC12-213ENST00000461577 STX6O43752 255 aa11.82□□□□□ -0.52
TRAPPC12-213ENST00000461577 GPR32O75388 356 aa11.82□□□□□ -0.52
TRAPPC12-213ENST00000461577 LYPLA2O95372 231 aa11.82□□□□□ -0.52
TRAPPC12-213ENST00000461577 PRPHP41219 470 aa11.82□□□□□ -0.52
TRAPPC12-213ENST00000461577 CDC42EP1Q00587 391 aa11.82□□□□□ -0.52
TRAPPC12-213ENST00000461577 NFX1Q12986 1120 aaKnown RBP11.82□□□□□ -0.52
TRAPPC12-213ENST00000461577 PDIA5Q14554 519 aa11.82□□□□□ -0.52
TRAPPC12-213ENST00000461577 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.82□□□□□ -0.52
TRAPPC12-213ENST00000461577 Q7L0L9 218 aa11.82□□□□□ -0.52
TRAPPC12-213ENST00000461577 NLRP7Q8WX94 980 aa11.82□□□□□ -0.52
TRAPPC12-213ENST00000461577 FAM161BQ96MY7 647 aa11.82□□□□□ -0.52
TRAPPC12-213ENST00000461577 FTHL17Q9BXU8 183 aa11.82□□□□□ -0.52
TRAPPC12-213ENST00000461577 NKX2-4Q9H2Z4 354 aa11.82□□□□□ -0.52
TRAPPC12-213ENST00000461577 AGO3Q9H9G7 860 aaKnown RBP11.82□□□□□ -0.52
TRAPPC12-213ENST00000461577 CDHR5Q9HBB8 845 aa11.82□□□□□ -0.52
TRAPPC12-213ENST00000461577 SUCLA2Q9P2R7 463 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC12-213ENST00000461577 PADI3Q9ULW8 664 aa11.82□□□□□ -0.52
TRAPPC12-213ENST00000461577 IGKV6-21A0A0C4DH24 114 aa11.81□□□□□ -0.52
TRAPPC12-213ENST00000461577 ZBTB39O15060 712 aa11.81□□□□□ -0.52
TRAPPC12-213ENST00000461577 GPR182O15218 404 aa11.81□□□□□ -0.52
TRAPPC12-213ENST00000461577 TLL1O43897 1013 aa11.81□□□□□ -0.52
TRAPPC12-213ENST00000461577 GAS2O43903 313 aaKnown RBP11.81□□□□□ -0.52
TRAPPC12-213ENST00000461577 MED24O75448 989 aa11.81□□□□□ -0.52
TRAPPC12-213ENST00000461577 BMP15O95972 392 aa11.81□□□□□ -0.52
TRAPPC12-213ENST00000461577 SPATA31C1P0DKV0 1188 aa11.81□□□□□ -0.52
TRAPPC12-213ENST00000461577 XRCC6P12956 609 aaKnown RBP eCLIP11.81□□□□□ -0.523e-7■□□□□ 10.3
TRAPPC12-213ENST00000461577 RPA1P27694 616 aa11.81□□□□□ -0.52
TRAPPC12-213ENST00000461577 CCT6AP40227 531 aaKnown RBP11.81□□□□□ -0.52
TRAPPC12-213ENST00000461577 GPC3P51654 580 aa11.81□□□□□ -0.52
TRAPPC12-213ENST00000461577 ATP2C1P98194 919 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC12-213ENST00000461577 DRP2Q13474 957 aa11.81□□□□□ -0.52
TRAPPC12-213ENST00000461577 EMC2Q15006 297 aa11.81□□□□□ -0.52
TRAPPC12-213ENST00000461577 FAM117BQ6P1L5 589 aa11.81□□□□□ -0.52
TRAPPC12-213ENST00000461577 CATSPER3Q86XQ3 398 aa11.81□□□□□ -0.52
TRAPPC12-213ENST00000461577 RHPN2Q8IUC4 686 aa11.81□□□□□ -0.52
TRAPPC12-213ENST00000461577 ZNF579Q8NAF0 562 aaKnown RBP11.81□□□□□ -0.52
TRAPPC12-213ENST00000461577 SPRYD3Q8NCJ5 442 aa11.81□□□□□ -0.52
TRAPPC12-213ENST00000461577 SNX29Q8TEQ0 813 aa11.81□□□□□ -0.52
TRAPPC12-213ENST00000461577 PIGOQ8TEQ8 1089 aa11.81□□□□□ -0.52
TRAPPC12-213ENST00000461577 TCP11Q8WWU5 503 aa11.81□□□□□ -0.52
TRAPPC12-213ENST00000461577 ZNF668Q96K58 619 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC12-213ENST00000461577 NACC1Q96RE7 527 aa11.81□□□□□ -0.52
TRAPPC12-213ENST00000461577 MTRQ99707 1265 aa11.81□□□□□ -0.52
TRAPPC12-213ENST00000461577 DHX33Q9H6R0 707 aaKnown RBP11.81□□□□□ -0.52
TRAPPC12-213ENST00000461577 SLC28A3Q9HAS3 691 aa11.81□□□□□ -0.52
TRAPPC12-213ENST00000461577 BMP2KQ9NSY1 1161 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC12-213ENST00000461577 MTMR6Q9Y217 621 aa11.81□□□□□ -0.52
TRAPPC12-213ENST00000461577 YBX2Q9Y2T7 364 aaKnown RBP11.81□□□□□ -0.52
TRAPPC12-213ENST00000461577 NOC2LQ9Y3T9 749 aaKnown RBP11.81□□□□□ -0.52
TRAPPC12-213ENST00000461577 A0A087WWV3 80 aa11.8□□□□□ -0.52
TRAPPC12-213ENST00000461577 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC12-213ENST00000461577 ENPP3O14638 875 aa11.8□□□□□ -0.52
TRAPPC12-213ENST00000461577 UPP2O95045 317 aa11.8□□□□□ -0.52
TRAPPC12-213ENST00000461577 GJB5O95377 273 aa11.8□□□□□ -0.52
TRAPPC12-213ENST00000461577 MYOGP15173 224 aa11.8□□□□□ -0.52
TRAPPC12-213ENST00000461577 MUTP22033 750 aa11.8□□□□□ -0.52
TRAPPC12-213ENST00000461577 RARRES1P49788 294 aa11.8□□□□□ -0.52
TRAPPC12-213ENST00000461577 RESTQ13127 1097 aa11.8□□□□□ -0.52
TRAPPC12-213ENST00000461577 MKRN4PQ13434 485 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC12-213ENST00000461577 KRT79Q5XKE5 535 aa11.8□□□□□ -0.52
TRAPPC12-213ENST00000461577 ARL6IP4Q66PJ3 421 aaKnown RBP11.8□□□□□ -0.52
TRAPPC12-213ENST00000461577 POTEGQ6S5H5 508 aa11.8□□□□□ -0.52
TRAPPC12-213ENST00000461577 TMCO2Q7Z6W1 182 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC12-213ENST00000461577 IGSF22Q8N9C0 903 aa11.8□□□□□ -0.52
TRAPPC12-213ENST00000461577 TMEM40Q8WWA1 233 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms