RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 SAMD11Q96NU1 681 aa17.28■□□□□ 0.36
VARS-219ENST00000461328 MAP7D2Q96T17 732 aa17.28■□□□□ 0.36
VARS-219ENST00000461328 VAV3Q9UKW4 847 aa17.28■□□□□ 0.36
VARS-219ENST00000461328 COL4A6Q14031 1691 aa17.27■□□□□ 0.36
VARS-219ENST00000461328 RPS6KA5O75582 802 aa17.27■□□□□ 0.36
VARS-219ENST00000461328 CLCN3P51790 818 aa17.27■□□□□ 0.36
VARS-219ENST00000461328 TBC1D8BQ0IIM8 1120 aa17.27■□□□□ 0.36
VARS-219ENST00000461328 KIZQ2M2Z5 673 aa17.27■□□□□ 0.36
VARS-219ENST00000461328 MTERF2Q49AM1 385 aa17.27■□□□□ 0.36
VARS-219ENST00000461328 TJAP1Q5JTD0 557 aa17.27■□□□□ 0.36
VARS-219ENST00000461328 ODR4Q5SWX8 454 aa17.27■□□□□ 0.36
VARS-219ENST00000461328 EFCAB12Q6NXP0 572 aa17.27■□□□□ 0.36
VARS-219ENST00000461328 B3GNT9Q6UX72 402 aa17.27■□□□□ 0.36
VARS-219ENST00000461328 ATXN2LQ8WWM7 1075 aaKnown RBP17.27■□□□□ 0.36
VARS-219ENST00000461328 HAS1Q92839 578 aa17.27■□□□□ 0.36
VARS-219ENST00000461328 OSMRQ99650 979 aa17.27■□□□□ 0.36
VARS-219ENST00000461328 BACH2Q9BYV9 841 aa17.27■□□□□ 0.36
VARS-219ENST00000461328 FOXP1Q9H334 677 aaPredicted RBP17.27■□□□□ 0.36
VARS-219ENST00000461328 CDHR5Q9HBB8 845 aa17.27■□□□□ 0.36
VARS-219ENST00000461328 AKT3Q9Y243 479 aa17.27■□□□□ 0.36
VARS-219ENST00000461328 NOC2LQ9Y3T9 749 aaKnown RBP17.27■□□□□ 0.36
VARS-219ENST00000461328 ADGRA3Q8IWK6 1321 aa17.26■□□□□ 0.35
VARS-219ENST00000461328 DDX11L8A8MPP1 907 aa17.26■□□□□ 0.35
VARS-219ENST00000461328 EML1O00423 815 aa17.26■□□□□ 0.35
VARS-219ENST00000461328 DKC1O60832 514 aaKnown RBP eCLIP17.26■□□□□ 0.35
VARS-219ENST00000461328 MCM7P33993 719 aa17.26■□□□□ 0.35
VARS-219ENST00000461328 CRYBB1P53674 252 aaPredicted RBP17.26■□□□□ 0.35
VARS-219ENST00000461328 PSMC5P62195 406 aa17.26■□□□□ 0.35
VARS-219ENST00000461328 EPC2Q52LR7 807 aa17.26■□□□□ 0.35
VARS-219ENST00000461328 XKR3Q5GH77 459 aa17.26■□□□□ 0.35
VARS-219ENST00000461328 RTN4RL1Q86UN2 441 aaPredicted RBP17.26■□□□□ 0.35
VARS-219ENST00000461328 NPAS4Q8IUM7 802 aa17.26■□□□□ 0.35
VARS-219ENST00000461328 LRRC71Q8N4P6 559 aa17.26■□□□□ 0.35
VARS-219ENST00000461328 FIBCD1Q8N539 461 aa17.26■□□□□ 0.35
VARS-219ENST00000461328 TMEM40Q8WWA1 233 aa17.26■□□□□ 0.35
VARS-219ENST00000461328 SYMPKQ92797 1274 aaKnown RBP17.26■□□□□ 0.35
VARS-219ENST00000461328 SCLT1Q96NL6 688 aa17.26■□□□□ 0.35
VARS-219ENST00000461328 TMX1Q9H3N1 280 aa17.26■□□□□ 0.35
VARS-219ENST00000461328 ERVK-5Q9HDB9 667 aa17.26■□□□□ 0.35
VARS-219ENST00000461328 LMCD1Q9NZU5 365 aa17.26■□□□□ 0.35
VARS-219ENST00000461328 NOL7Q9UMY1 257 aaKnown RBP17.26■□□□□ 0.35
VARS-219ENST00000461328 WNT7AO00755 349 aa17.25■□□□□ 0.35
VARS-219ENST00000461328 GPR182O15218 404 aa17.25■□□□□ 0.35
VARS-219ENST00000461328 STAG3L1P0CL83 205 aa17.25■□□□□ 0.35
VARS-219ENST00000461328 IBSPP21815 317 aaPredicted RBP17.25■□□□□ 0.35
VARS-219ENST00000461328 QARSP47897 775 aaKnown RBP17.25■□□□□ 0.35
VARS-219ENST00000461328 MRPS5P82675 430 aaKnown RBP17.25■□□□□ 0.35
VARS-219ENST00000461328 BTG3Q14201 252 aaPredicted RBP17.25■□□□□ 0.35
VARS-219ENST00000461328 NOSTRINQ8IVI9 506 aa17.25■□□□□ 0.35
VARS-219ENST00000461328 TMEM192Q8IY95 271 aa17.25■□□□□ 0.35
VARS-219ENST00000461328 PRRC2BQ5JSZ5 2229 aaKnown RBP17.25■□□□□ 0.35
VARS-219ENST00000461328 WDR81Q562E7 1941 aa17.24■□□□□ 0.35
VARS-219ENST00000461328 LOXHD1Q8IVV2 1947 aa17.24■□□□□ 0.35
VARS-219ENST00000461328 DENND3A2RUS2 1198 aa17.24■□□□□ 0.35
VARS-219ENST00000461328 TMEM150BA6NC51 233 aa17.24■□□□□ 0.35
VARS-219ENST00000461328 GPR32O75388 356 aa17.24■□□□□ 0.35
VARS-219ENST00000461328 P4HBP07237 508 aaKnown RBP17.24■□□□□ 0.35
VARS-219ENST00000461328 GJB2P29033 226 aa17.24■□□□□ 0.35
VARS-219ENST00000461328 CTNNB1P35222 781 aa17.24■□□□□ 0.35
VARS-219ENST00000461328 TXKP42681 527 aa17.24■□□□□ 0.35
VARS-219ENST00000461328 NLRP11P59045 1033 aaKnown RBP17.24■□□□□ 0.35
VARS-219ENST00000461328 CYP4A11Q02928 519 aa17.24■□□□□ 0.35
VARS-219ENST00000461328 EPHA7Q15375 998 aa17.24■□□□□ 0.35
VARS-219ENST00000461328 PLA2G4FQ68DD2 849 aa17.24■□□□□ 0.35
VARS-219ENST00000461328 MCTP1Q6DN14 999 aa17.24■□□□□ 0.35
VARS-219ENST00000461328 FAM43BQ6ZT52 329 aaPredicted RBP17.24■□□□□ 0.35
VARS-219ENST00000461328 ZNF710Q8N1W2 664 aa17.24■□□□□ 0.35
VARS-219ENST00000461328 LINC01465Q8N7H1 131 aa17.24■□□□□ 0.35
VARS-219ENST00000461328 ASB2Q96Q27 587 aa17.24■□□□□ 0.35
VARS-219ENST00000461328 LXNQ9BS40 222 aa17.24■□□□□ 0.35
VARS-219ENST00000461328 NIFKQ9BYG3 293 aaKnown RBP17.24■□□□□ 0.35
VARS-219ENST00000461328 TTC12Q9H892 705 aaPredicted RBP17.24■□□□□ 0.35
VARS-219ENST00000461328 LRFN2Q9ULH4 789 aa17.24■□□□□ 0.35
VARS-219ENST00000461328 PCDHA12Q9UN75 941 aa17.24■□□□□ 0.35
VARS-219ENST00000461328 ST3GAL5Q9UNP4 418 aa17.24■□□□□ 0.35
VARS-219ENST00000461328 SMC3Q9UQE7 1217 aa17.24■□□□□ 0.35
VARS-219ENST00000461328 EVPLQ92817 2033 aa17.24■□□□□ 0.35
VARS-219ENST00000461328 H3BQV1 296 aa17.23■□□□□ 0.35
VARS-219ENST00000461328 DGKIO75912 1065 aa17.23■□□□□ 0.35
VARS-219ENST00000461328 GPM6BQ13491 265 aa17.23■□□□□ 0.35
VARS-219ENST00000461328 TARBP2Q15633 366 aaKnown RBP17.23■□□□□ 0.35
VARS-219ENST00000461328 PTPROQ16827 1216 aa17.23■□□□□ 0.35
VARS-219ENST00000461328 TTC38Q5R3I4 469 aa17.23■□□□□ 0.35
VARS-219ENST00000461328 FAM228AQ86W67 206 aa17.23■□□□□ 0.35
VARS-219ENST00000461328 ZNF689Q96CS4 500 aaPredicted RBP17.23■□□□□ 0.35
VARS-219ENST00000461328 DYDC2Q96IM9 177 aa17.23■□□□□ 0.35
VARS-219ENST00000461328 ADAM2Q99965 735 aa17.23■□□□□ 0.35
VARS-219ENST00000461328 SH2D3AQ9BRG2 576 aa17.23■□□□□ 0.35
VARS-219ENST00000461328 RC3H2Q9HBD1 1191 aaKnown RBP17.23■□□□□ 0.35
VARS-219ENST00000461328 C1orf112Q9NSG2 853 aa17.23■□□□□ 0.35
VARS-219ENST00000461328 RWDD3Q9Y3V2 267 aa17.23■□□□□ 0.35
VARS-219ENST00000461328 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.23■□□□□ 0.35
VARS-219ENST00000461328 TTC3P53804 2025 aa17.22■□□□□ 0.35
VARS-219ENST00000461328 H3BNC9 293 aa17.22■□□□□ 0.35
VARS-219ENST00000461328 MGEA5O60502 916 aa17.22■□□□□ 0.35
VARS-219ENST00000461328 STBD1O95210 358 aa17.22■□□□□ 0.35
VARS-219ENST00000461328 SARSP49591 514 aaKnown RBP17.22■□□□□ 0.35
VARS-219ENST00000461328 CTTNQ14247 550 aaKnown RBP17.22■□□□□ 0.35
VARS-219ENST00000461328 ZNF174Q15697 407 aa17.22■□□□□ 0.35
VARS-219ENST00000461328 AAK1Q2M2I8 961 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms