RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 KDM1AO60341 852 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 CHRNDQ07001 517 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 CCDC85BQ15834 202 aaPredicted RBP9.6□□□□□ -0.87
BRCA1-205ENST00000461221 RARS2Q5T160 578 aaKnown RBP9.6□□□□□ -0.87
BRCA1-205ENST00000461221 GPT2Q8TD30 523 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.6□□□□□ -0.87
BRCA1-205ENST00000461221 TRIM54Q9BYV2 358 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 LEMD3Q9Y2U8 911 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 XDHP47989 1333 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 PI4K2BG5E9Z4 385 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 ASAP2O43150 1006 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 CALB1P05937 261 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 PLA2G4BP0C869 781 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 IL10P22301 178 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 DDIT3P35638 169 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 MRPS15P82914 257 aaKnown RBP9.6□□□□□ -0.87
BRCA1-205ENST00000461221 ZNF667Q5HYK9 610 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 SYDE2Q5VT97 1194 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 ABHD8Q96I13 439 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 GPR108Q9NPR9 543 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 CCDC78A2IDD5 438 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 SOWAHDA6NJG2 315 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 E5RI56 91 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 CIAO1O76071 339 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 FGGP02679 453 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 BMP3P12645 472 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 NT5C2P49902 561 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 SCARA5Q6ZMJ2 495 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 TOGARAM2Q6ZUX3 1019 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 FAM160B2Q86V87 743 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 DDX42Q86XP3 938 aaKnown RBP eCLIP9.6□□□□□ -0.87
BRCA1-205ENST00000461221 KIAA2013Q8IYS2 634 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 NDST4Q9H3R1 872 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 ZNF804BA4D1E1 1349 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 ZSCAN9O15535 394 aaPredicted RBP9.6□□□□□ -0.87
BRCA1-205ENST00000461221 APBA3O96018 575 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 GSNP06396 782 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 NNMTP40261 264 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 PMS1P54277 932 aaKnown RBP9.6□□□□□ -0.87
BRCA1-205ENST00000461221 HDLBPQ00341 1268 aaKnown RBP9.6□□□□□ -0.87
BRCA1-205ENST00000461221 CDO1Q16878 200 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 ITPRIPL1Q6GPH6 555 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 PLEKHM3Q6ZWE6 761 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 RAB42Q8N4Z0 105 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 OR6B3Q8NGW1 331 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 OPTNQ96CV9 577 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 VPS11Q9H270 941 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 KIAA1586Q9HCI6 787 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 ADA2Q9NZK5 511 aa9.6□□□□□ -0.87
BRCA1-205ENST00000461221 HSPA1AP0DMV8 641 aaKnown RBP9.59□□□□□ -0.87
BRCA1-205ENST00000461221 HSPA1BP0DMV9 641 aaKnown RBP9.59□□□□□ -0.87
BRCA1-205ENST00000461221 CLCN6P51797 869 aa9.59□□□□□ -0.87
BRCA1-205ENST00000461221 UBXN2AP68543 259 aa9.59□□□□□ -0.87
BRCA1-205ENST00000461221 GPR162Q16538 588 aa9.59□□□□□ -0.87
BRCA1-205ENST00000461221 DOK7Q18PE1 504 aa9.59□□□□□ -0.87
BRCA1-205ENST00000461221 Q3C1V9 767 aa9.59□□□□□ -0.87
BRCA1-205ENST00000461221 ALKBH5Q6P6C2 394 aaKnown RBP9.59□□□□□ -0.87
BRCA1-205ENST00000461221 TADA2BQ86TJ2 420 aa9.59□□□□□ -0.87
BRCA1-205ENST00000461221 ZFYVE19Q96K21 471 aa9.59□□□□□ -0.87
BRCA1-205ENST00000461221 ABCB6Q9NP58 842 aa9.59□□□□□ -0.87
BRCA1-205ENST00000461221 ZNF229Q9UJW7 825 aa9.59□□□□□ -0.87
BRCA1-205ENST00000461221 NFU1Q9UMS0 254 aa9.59□□□□□ -0.87
BRCA1-205ENST00000461221 PCDHGB4Q9UN71 923 aa9.59□□□□□ -0.87
BRCA1-205ENST00000461221 TBC1D9BQ66K14 1250 aa9.59□□□□□ -0.87
BRCA1-205ENST00000461221 EDC3Q96F86 508 aaKnown RBP9.59□□□□□ -0.87
BRCA1-205ENST00000461221 STAMBPL1Q96FJ0 436 aa9.59□□□□□ -0.87
BRCA1-205ENST00000461221 NGRNQ9NPE2 291 aaKnown RBP9.59□□□□□ -0.87
BRCA1-205ENST00000461221 CASS4Q9NQ75 786 aa9.59□□□□□ -0.87
BRCA1-205ENST00000461221 ZSCAN32Q9NX65 697 aa9.59□□□□□ -0.87
BRCA1-205ENST00000461221 ATP11BQ9Y2G3 1177 aa9.59□□□□□ -0.87
BRCA1-205ENST00000461221 CFAP73A6NFT4 308 aa9.59□□□□□ -0.87
BRCA1-205ENST00000461221 PRR23D1E9PI22 279 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-205ENST00000461221 ZNF197O14709 1029 aa9.59□□□□□ -0.87
BRCA1-205ENST00000461221 CCDC22O60826 627 aa9.59□□□□□ -0.87
BRCA1-205ENST00000461221 MMP1P03956 469 aa9.59□□□□□ -0.87
BRCA1-205ENST00000461221 PRR23D2P0DMB1 279 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-205ENST00000461221 PSMC1P62191 440 aaKnown RBP9.59□□□□□ -0.87
BRCA1-205ENST00000461221 CACNB1Q02641 598 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-205ENST00000461221 DPCR1Q3MIW9 517 aa9.59□□□□□ -0.87
BRCA1-205ENST00000461221 TJAP1Q5JTD0 557 aa9.59□□□□□ -0.87
BRCA1-205ENST00000461221 RASSF3Q86WH2 238 aa9.59□□□□□ -0.87
BRCA1-205ENST00000461221 TMEM35BQ8NCS4 154 aa9.59□□□□□ -0.87
BRCA1-205ENST00000461221 ZNF496Q96IT1 587 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-205ENST00000461221 EML4Q9HC35 981 aaKnown RBP9.59□□□□□ -0.87
BRCA1-205ENST00000461221 SPTLC3Q9NUV7 552 aa9.59□□□□□ -0.87
BRCA1-205ENST00000461221 ZNF518AQ6AHZ1 1483 aa9.59□□□□□ -0.87
BRCA1-205ENST00000461221 NPC1L1Q9UHC9 1359 aa9.59□□□□□ -0.87
BRCA1-205ENST00000461221 HMGXB3Q12766 1538 aa9.59□□□□□ -0.87
BRCA1-205ENST00000461221 KRT87PA6NCN2 255 aa9.59□□□□□ -0.87
BRCA1-205ENST00000461221 H0Y3Z8 333 aa9.59□□□□□ -0.87
BRCA1-205ENST00000461221 WBP4O75554 376 aaKnown RBP9.59□□□□□ -0.87
BRCA1-205ENST00000461221 WDR47O94967 919 aa9.59□□□□□ -0.87
BRCA1-205ENST00000461221 CDH2P19022 906 aaPredicted RBP9.59□□□□□ -0.87
BRCA1-205ENST00000461221 SERPINB4P48594 390 aa9.59□□□□□ -0.87
BRCA1-205ENST00000461221 ARFIP2P53365 341 aa9.59□□□□□ -0.87
BRCA1-205ENST00000461221 APOA5Q6Q788 366 aa9.59□□□□□ -0.87
BRCA1-205ENST00000461221 RMDN2Q96LZ7 410 aa9.59□□□□□ -0.87
BRCA1-205ENST00000461221 EGFL8Q99944 293 aa9.59□□□□□ -0.87
BRCA1-205ENST00000461221 SELENONQ9NZV5 590 aa9.59□□□□□ -0.87
BRCA1-205ENST00000461221 FARP1Q9Y4F1 1045 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 148.2 ms