RNA–Protein interactions for RNA: ENST00000461217.1

COL16A1-206, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-206ENST00000461217 CSPP1Q1MSJ5 1256 aa17.09■□□□□ 0.33
COL16A1-206ENST00000461217 CTC1Q2NKJ3 1217 aa17.09■□□□□ 0.33
COL16A1-206ENST00000461217 POF1BQ8WVV4 589 aa17.09■□□□□ 0.33
COL16A1-206ENST00000461217 FAM167AQ96KS9 214 aa17.09■□□□□ 0.33
COL16A1-206ENST00000461217 MAP7D2Q96T17 732 aa17.09■□□□□ 0.33
COL16A1-206ENST00000461217 AAASQ9NRG9 546 aa17.09■□□□□ 0.33
COL16A1-206ENST00000461217 PCDHB12Q9Y5F1 795 aa17.09■□□□□ 0.33
COL16A1-206ENST00000461217 WDR64B1ANS9 1081 aa17.08■□□□□ 0.32
COL16A1-206ENST00000461217 CHMP2AO43633 222 aa17.08■□□□□ 0.32
COL16A1-206ENST00000461217 DNAJB1P25685 340 aa17.08■□□□□ 0.32
COL16A1-206ENST00000461217 CLCN3P51790 818 aa17.08■□□□□ 0.32
COL16A1-206ENST00000461217 NLRP5P59047 1200 aa17.08■□□□□ 0.32
COL16A1-206ENST00000461217 CAMK1Q14012 370 aa17.08■□□□□ 0.32
COL16A1-206ENST00000461217 FAM43BQ6ZT52 329 aaPredicted RBP17.08■□□□□ 0.32
COL16A1-206ENST00000461217 SLC24A5Q71RS6 500 aa17.08■□□□□ 0.32
COL16A1-206ENST00000461217 ADGRD2Q7Z7M1 963 aa17.08■□□□□ 0.32
COL16A1-206ENST00000461217 ADHFE1Q8IWW8 467 aa17.08■□□□□ 0.32
COL16A1-206ENST00000461217 TRIM22Q8IYM9 498 aa17.08■□□□□ 0.32
COL16A1-206ENST00000461217 SPPL3Q8TCT6 385 aa17.08■□□□□ 0.32
COL16A1-206ENST00000461217 MICAL1Q8TDZ2 1067 aa17.08■□□□□ 0.32
COL16A1-206ENST00000461217 NCOA5Q9HCD5 579 aaKnown RBP17.08■□□□□ 0.32
COL16A1-206ENST00000461217 RGS18Q9NS28 235 aa17.08■□□□□ 0.32
COL16A1-206ENST00000461217 CD207Q9UJ71 328 aa17.08■□□□□ 0.32
COL16A1-206ENST00000461217 AKT3Q9Y243 479 aa17.08■□□□□ 0.32
COL16A1-206ENST00000461217 MAGEB2O15479 319 aa17.07■□□□□ 0.32
COL16A1-206ENST00000461217 MBTPS2O43462 519 aa17.07■□□□□ 0.32
COL16A1-206ENST00000461217 DCXO43602 365 aa17.07■□□□□ 0.32
COL16A1-206ENST00000461217 GAS7O60861 476 aa17.07■□□□□ 0.32
COL16A1-206ENST00000461217 IFNAR1P17181 557 aa17.07■□□□□ 0.32
COL16A1-206ENST00000461217 TMOD1P28289 359 aa17.07■□□□□ 0.32
COL16A1-206ENST00000461217 CIITAP33076 1130 aa17.07■□□□□ 0.32
COL16A1-206ENST00000461217 IRS1P35568 1242 aa17.07■□□□□ 0.32
COL16A1-206ENST00000461217 SMAD4Q13485 552 aaKnown RBP17.07■□□□□ 0.32
COL16A1-206ENST00000461217 SMAD2Q15796 467 aaKnown RBP17.07■□□□□ 0.32
COL16A1-206ENST00000461217 NTRK3Q16288 839 aa17.07■□□□□ 0.32
COL16A1-206ENST00000461217 FAM102BQ5T8I3 360 aa17.07■□□□□ 0.32
COL16A1-206ENST00000461217 RBM23Q86U06 439 aaKnown RBP17.07■□□□□ 0.32
COL16A1-206ENST00000461217 FAM228AQ86W67 206 aa17.07■□□□□ 0.32
COL16A1-206ENST00000461217 FBXL16Q8N461 479 aa17.07■□□□□ 0.32
COL16A1-206ENST00000461217 SCLT1Q96NL6 688 aa17.07■□□□□ 0.32
COL16A1-206ENST00000461217 POP1Q99575 1024 aaKnown RBP17.07■□□□□ 0.32
COL16A1-206ENST00000461217 AGXT2Q9BYV1 514 aa17.07■□□□□ 0.32
COL16A1-206ENST00000461217 ATP6V0A4Q9HBG4 840 aa17.07■□□□□ 0.32
COL16A1-206ENST00000461217 DISC1Q9NRI5 854 aa17.07■□□□□ 0.32
COL16A1-206ENST00000461217 NCOR1O75376 2440 aa17.07■□□□□ 0.32
COL16A1-206ENST00000461217 BRWD1Q9NSI6 2320 aa17.07■□□□□ 0.32
COL16A1-206ENST00000461217 PRR33A8MZF0 331 aa17.06■□□□□ 0.32
COL16A1-206ENST00000461217 C9IYK1 514 aa17.06■□□□□ 0.32
COL16A1-206ENST00000461217 OATP04181 439 aa17.06■□□□□ 0.32
COL16A1-206ENST00000461217 PDIA3P30101 505 aaKnown RBP17.06■□□□□ 0.32
COL16A1-206ENST00000461217 NRIP1P48552 1158 aa17.06■□□□□ 0.32
COL16A1-206ENST00000461217 NLRP11P59045 1033 aaKnown RBP17.06■□□□□ 0.32
COL16A1-206ENST00000461217 PRKCEQ02156 737 aa17.06■□□□□ 0.32
COL16A1-206ENST00000461217 ADAM15Q13444 863 aa17.06■□□□□ 0.32
COL16A1-206ENST00000461217 LRCH2Q5VUJ6 765 aa17.06■□□□□ 0.32
COL16A1-206ENST00000461217 EFCAB12Q6NXP0 572 aa17.06■□□□□ 0.32
COL16A1-206ENST00000461217 THNSL1Q8IYQ7 743 aa17.06■□□□□ 0.32
COL16A1-206ENST00000461217 LRRC71Q8N4P6 559 aa17.06■□□□□ 0.32
COL16A1-206ENST00000461217 LENG9Q96B70 501 aa17.06■□□□□ 0.32
COL16A1-206ENST00000461217 TEKT3Q9BXF9 490 aa17.06■□□□□ 0.32
COL16A1-206ENST00000461217 UPF3BQ9BZI7 483 aaKnown RBP17.06■□□□□ 0.32
COL16A1-206ENST00000461217 NRBP2Q9NSY0 501 aa17.06■□□□□ 0.32
COL16A1-206ENST00000461217 TMEM161AQ9NX61 479 aa17.06■□□□□ 0.32
COL16A1-206ENST00000461217 CPLX1O14810 134 aa17.05■□□□□ 0.32
COL16A1-206ENST00000461217 MSH4O15457 936 aa17.05■□□□□ 0.32
COL16A1-206ENST00000461217 GPR32O75388 356 aa17.05■□□□□ 0.32
COL16A1-206ENST00000461217 FGFR1P11362 822 aa17.05■□□□□ 0.32
COL16A1-206ENST00000461217 USP11P51784 963 aa17.05■□□□□ 0.32
COL16A1-206ENST00000461217 SSRP1Q08945 709 aaKnown RBP17.05■□□□□ 0.32
COL16A1-206ENST00000461217 RABEP1Q15276 862 aa17.05■□□□□ 0.32
COL16A1-206ENST00000461217 RUFY3Q7L099 469 aa17.05■□□□□ 0.32
COL16A1-206ENST00000461217 ZNF668Q96K58 619 aaPredicted RBP17.05■□□□□ 0.32
COL16A1-206ENST00000461217 TLE6Q9H808 572 aa17.05■□□□□ 0.32
COL16A1-206ENST00000461217 SH3GLB2Q9NR46 395 aa17.05■□□□□ 0.32
COL16A1-206ENST00000461217 PLXNA4Q9HCM2 1894 aa17.05■□□□□ 0.32
COL16A1-206ENST00000461217 C19orf67A6NJJ6 358 aa17.04■□□□□ 0.32
COL16A1-206ENST00000461217 FGF18O76093 207 aa17.04■□□□□ 0.32
COL16A1-206ENST00000461217 ZSCAN20P17040 1043 aaPredicted RBP17.04■□□□□ 0.32
COL16A1-206ENST00000461217 SFNP31947 248 aa17.04■□□□□ 0.32
COL16A1-206ENST00000461217 JAK3P52333 1124 aa17.04■□□□□ 0.32
COL16A1-206ENST00000461217 UBE3AQ05086 875 aa17.04■□□□□ 0.32
COL16A1-206ENST00000461217 ABI1Q8IZP0 508 aa17.04■□□□□ 0.32
COL16A1-206ENST00000461217 EFHBQ8N7U6 833 aa17.04■□□□□ 0.32
COL16A1-206ENST00000461217 COLGALT1Q8NBJ5 622 aa17.04■□□□□ 0.32
COL16A1-206ENST00000461217 TBCKQ8TEA7 893 aa17.04■□□□□ 0.32
COL16A1-206ENST00000461217 RIT2Q99578 217 aa17.04■□□□□ 0.32
COL16A1-206ENST00000461217 ELAC1Q9H777 363 aaKnown RBP17.04■□□□□ 0.32
COL16A1-206ENST00000461217 TLR9Q9NR96 1032 aa17.04■□□□□ 0.32
COL16A1-206ENST00000461217 TYW1Q9NV66 732 aaKnown RBP17.04■□□□□ 0.32
COL16A1-206ENST00000461217 HCSTQ9UBK5 93 aa17.04■□□□□ 0.32
COL16A1-206ENST00000461217 PCDHGC5Q9Y5F6 944 aa17.04■□□□□ 0.32
COL16A1-206ENST00000461217 CYP46A1Q9Y6A2 500 aa17.04■□□□□ 0.32
COL16A1-206ENST00000461217 MYH9P35579 1960 aaKnown RBP17.04■□□□□ 0.32
COL16A1-206ENST00000461217 FNDC1Q4ZHG4 1894 aaPredicted RBP17.03■□□□□ 0.32
COL16A1-206ENST00000461217 EVPLQ92817 2033 aa17.03■□□□□ 0.32
COL16A1-206ENST00000461217 HOXA2O43364 376 aa17.03■□□□□ 0.32
COL16A1-206ENST00000461217 ZNF862O60290 1169 aa17.03■□□□□ 0.32
COL16A1-206ENST00000461217 LAG3P18627 525 aa17.03■□□□□ 0.32
COL16A1-206ENST00000461217 TBC1D8BQ0IIM8 1120 aa17.03■□□□□ 0.32
COL16A1-206ENST00000461217 UGCGQ16739 394 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms