RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 GPR182O15218 404 aa16.65■□□□□ 0.26
SMPD4-216ENST00000461187 PPFIA3O75145 1194 aa16.65■□□□□ 0.26
SMPD4-216ENST00000461187 VTNP04004 478 aa16.65■□□□□ 0.26
SMPD4-216ENST00000461187 AKAP17AQ02040 695 aaKnown RBP16.65■□□□□ 0.26
SMPD4-216ENST00000461187 SMAD4Q13485 552 aaKnown RBP16.65■□□□□ 0.26
SMPD4-216ENST00000461187 FAM102BQ5T8I3 360 aa16.65■□□□□ 0.26
SMPD4-216ENST00000461187 TRMT1LQ7Z2T5 733 aaKnown RBP16.65■□□□□ 0.26
SMPD4-216ENST00000461187 METTL13Q8N6R0 699 aa16.65■□□□□ 0.26
SMPD4-216ENST00000461187 MSLNLQ96KJ4 702 aa16.65■□□□□ 0.26
SMPD4-216ENST00000461187 RNF26Q9BY78 433 aaPredicted RBP16.65■□□□□ 0.26
SMPD4-216ENST00000461187 CD207Q9UJ71 328 aa16.65■□□□□ 0.26
SMPD4-216ENST00000461187 TBKBP1A7MCY6 615 aa16.64■□□□□ 0.25
SMPD4-216ENST00000461187 DCXO43602 365 aa16.64■□□□□ 0.25
SMPD4-216ENST00000461187 IFNAR1P17181 557 aa16.64■□□□□ 0.25
SMPD4-216ENST00000461187 EVCP57679 992 aa16.64■□□□□ 0.25
SMPD4-216ENST00000461187 FAM189BP81408 668 aa16.64■□□□□ 0.25
SMPD4-216ENST00000461187 DSC3Q14574 896 aa16.64■□□□□ 0.25
SMPD4-216ENST00000461187 LINC01465Q8N7H1 131 aa16.64■□□□□ 0.25
SMPD4-216ENST00000461187 EFHBQ8N7U6 833 aa16.64■□□□□ 0.25
SMPD4-216ENST00000461187 CCDC148Q8NFR7 591 aa16.64■□□□□ 0.25
SMPD4-216ENST00000461187 BICD2Q8TD16 824 aa16.64■□□□□ 0.25
SMPD4-216ENST00000461187 PPP2R3CQ969Q6 453 aa16.64■□□□□ 0.25
SMPD4-216ENST00000461187 SLC26A6Q9BXS9 759 aa16.64■□□□□ 0.25
SMPD4-216ENST00000461187 RNF216Q9NWF9 866 aaPredicted RBP16.64■□□□□ 0.25
SMPD4-216ENST00000461187 VPS54Q9P1Q0 977 aa16.64■□□□□ 0.25
SMPD4-216ENST00000461187 TCEAL9Q9UHQ7 104 aa16.64■□□□□ 0.25
SMPD4-216ENST00000461187 CEP131Q9UPN4 1083 aa16.64■□□□□ 0.25
SMPD4-216ENST00000461187 SAMM50Q9Y512 469 aa16.64■□□□□ 0.25
SMPD4-216ENST00000461187 PCDHGC5Q9Y5F6 944 aa16.64■□□□□ 0.25
SMPD4-216ENST00000461187 ARID2Q68CP9 1835 aa16.63■□□□□ 0.25
SMPD4-216ENST00000461187 WDR64B1ANS9 1081 aa16.63■□□□□ 0.25
SMPD4-216ENST00000461187 MSH4O15457 936 aa16.63■□□□□ 0.25
SMPD4-216ENST00000461187 MAGEB2O15479 319 aa16.63■□□□□ 0.25
SMPD4-216ENST00000461187 ZNF862O60290 1169 aa16.63■□□□□ 0.25
SMPD4-216ENST00000461187 EYA4O95677 639 aa16.63■□□□□ 0.25
SMPD4-216ENST00000461187 PDIA3P30101 505 aaKnown RBP16.63■□□□□ 0.25
SMPD4-216ENST00000461187 NDUFV1P49821 464 aa16.63■□□□□ 0.25
SMPD4-216ENST00000461187 CLCN3P51790 818 aa16.63■□□□□ 0.25
SMPD4-216ENST00000461187 EFCAB12Q6NXP0 572 aa16.63■□□□□ 0.25
SMPD4-216ENST00000461187 FAM167AQ96KS9 214 aa16.63■□□□□ 0.25
SMPD4-216ENST00000461187 NCOA5Q9HCD5 579 aaKnown RBP16.63■□□□□ 0.25
SMPD4-216ENST00000461187 TMEM161AQ9NX61 479 aa16.63■□□□□ 0.25
SMPD4-216ENST00000461187 CLEC1BQ9P126 229 aa16.63■□□□□ 0.25
SMPD4-216ENST00000461187 HCSTQ9UBK5 93 aa16.63■□□□□ 0.25
SMPD4-216ENST00000461187 PCDHB12Q9Y5F1 795 aa16.63■□□□□ 0.25
SMPD4-216ENST00000461187 PIEZO1Q92508 2521 aa16.63■□□□□ 0.25
SMPD4-216ENST00000461187 GLP2RO95838 553 aa16.62■□□□□ 0.25
SMPD4-216ENST00000461187 FGFR1P11362 822 aa16.62■□□□□ 0.25
SMPD4-216ENST00000461187 PSMA5P28066 241 aa16.62■□□□□ 0.25
SMPD4-216ENST00000461187 NRIP1P48552 1158 aa16.62■□□□□ 0.25
SMPD4-216ENST00000461187 USP11P51784 963 aa16.62■□□□□ 0.25
SMPD4-216ENST00000461187 NLRP11P59045 1033 aaKnown RBP16.62■□□□□ 0.25
SMPD4-216ENST00000461187 CCT2P78371 535 aaKnown RBP16.62■□□□□ 0.25
SMPD4-216ENST00000461187 UBE3AQ05086 875 aa16.62■□□□□ 0.25
SMPD4-216ENST00000461187 SPOUT1Q5T280 376 aaKnown RBP16.62■□□□□ 0.25
SMPD4-216ENST00000461187 RBM23Q86U06 439 aaKnown RBP16.62■□□□□ 0.25
SMPD4-216ENST00000461187 COLGALT1Q8NBJ5 622 aa16.62■□□□□ 0.25
SMPD4-216ENST00000461187 CCDC136Q96JN2 1154 aa16.62■□□□□ 0.25
SMPD4-216ENST00000461187 POP1Q99575 1024 aaKnown RBP16.62■□□□□ 0.25
SMPD4-216ENST00000461187 UPF3BQ9BZI7 483 aaKnown RBP16.62■□□□□ 0.25
SMPD4-216ENST00000461187 ADAMTS10Q9H324 1103 aa16.62■□□□□ 0.25
SMPD4-216ENST00000461187 CWH43Q9H720 699 aa16.62■□□□□ 0.25
SMPD4-216ENST00000461187 ELAC1Q9H777 363 aaKnown RBP16.62■□□□□ 0.25
SMPD4-216ENST00000461187 ATP6V0A4Q9HBG4 840 aa16.62■□□□□ 0.25
SMPD4-216ENST00000461187 SH3GLB2Q9NR46 395 aa16.62■□□□□ 0.25
SMPD4-216ENST00000461187 AAASQ9NRG9 546 aa16.62■□□□□ 0.25
SMPD4-216ENST00000461187 DISC1Q9NRI5 854 aa16.62■□□□□ 0.25
SMPD4-216ENST00000461187 TYW1Q9NV66 732 aaKnown RBP16.62■□□□□ 0.25
SMPD4-216ENST00000461187 FGF18O76093 207 aa16.61■□□□□ 0.25
SMPD4-216ENST00000461187 OATP04181 439 aa16.61■□□□□ 0.25
SMPD4-216ENST00000461187 HOXD11P31277 338 aaPredicted RBP16.61■□□□□ 0.25
SMPD4-216ENST00000461187 COASYQ13057 564 aa16.61■□□□□ 0.25
SMPD4-216ENST00000461187 TOB2Q14106 344 aaPredicted RBP16.61■□□□□ 0.25
SMPD4-216ENST00000461187 UGCGQ16739 394 aa16.61■□□□□ 0.25
SMPD4-216ENST00000461187 LRRC71Q8N4P6 559 aa16.61■□□□□ 0.25
SMPD4-216ENST00000461187 SMRP1Q8NCR6 262 aa16.61■□□□□ 0.25
SMPD4-216ENST00000461187 SLC5A5Q92911 643 aa16.61■□□□□ 0.25
SMPD4-216ENST00000461187 RIT2Q99578 217 aa16.61■□□□□ 0.25
SMPD4-216ENST00000461187 RNF19AQ9NV58 838 aa16.61■□□□□ 0.25
SMPD4-216ENST00000461187 AKT3Q9Y243 479 aa16.61■□□□□ 0.25
SMPD4-216ENST00000461187 GAS7O60861 476 aa16.6■□□□□ 0.25
SMPD4-216ENST00000461187 REC8O95072 547 aa16.6■□□□□ 0.25
SMPD4-216ENST00000461187 TMOD1P28289 359 aa16.6■□□□□ 0.25
SMPD4-216ENST00000461187 ERVFC1P60507 584 aa16.6■□□□□ 0.25
SMPD4-216ENST00000461187 PRKCEQ02156 737 aa16.6■□□□□ 0.25
SMPD4-216ENST00000461187 CSPP1Q1MSJ5 1256 aa16.6■□□□□ 0.25
SMPD4-216ENST00000461187 RUFY3Q7L099 469 aa16.6■□□□□ 0.25
SMPD4-216ENST00000461187 ZNF710Q8N1W2 664 aa16.6■□□□□ 0.25
SMPD4-216ENST00000461187 GJA10Q969M2 543 aa16.6■□□□□ 0.25
SMPD4-216ENST00000461187 MAP7D2Q96T17 732 aa16.6■□□□□ 0.25
SMPD4-216ENST00000461187 UNC45AQ9H3U1 944 aa16.6■□□□□ 0.25
SMPD4-216ENST00000461187 TLE6Q9H808 572 aa16.6■□□□□ 0.25
SMPD4-216ENST00000461187 TLR9Q9NR96 1032 aa16.6■□□□□ 0.25
SMPD4-216ENST00000461187 NRBP2Q9NSY0 501 aa16.6■□□□□ 0.25
SMPD4-216ENST00000461187 ZDBF2Q9HCK1 2354 aa16.59■□□□□ 0.25
SMPD4-216ENST00000461187 KMT2EQ8IZD2 1858 aa16.59■□□□□ 0.25
SMPD4-216ENST00000461187 PER2O15055 1255 aa16.59■□□□□ 0.25
SMPD4-216ENST00000461187 CHMP2AO43633 222 aa16.59■□□□□ 0.25
SMPD4-216ENST00000461187 EIF4BP23588 611 aaKnown RBP16.59■□□□□ 0.25
SMPD4-216ENST00000461187 SFNP31947 248 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms