RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 DKC1O60832 514 aaKnown RBP eCLIP11.97□□□□□ -0.49
IFT88-204ENST00000461115 CNMDO75829 334 aa11.97□□□□□ -0.49
IFT88-204ENST00000461115 FAM13AO94988 1023 aa11.97□□□□□ -0.49
IFT88-204ENST00000461115 ATG7O95352 703 aa11.97□□□□□ -0.49
IFT88-204ENST00000461115 MYCLP12524 364 aaPredicted RBP11.97□□□□□ -0.49
IFT88-204ENST00000461115 NR2F2P24468 414 aa11.97□□□□□ -0.49
IFT88-204ENST00000461115 SNRPFP62306 86 aaKnown RBP11.97□□□□□ -0.49
IFT88-204ENST00000461115 RAD51AP2Q09MP3 1159 aa11.97□□□□□ -0.49
IFT88-204ENST00000461115 KCNMA1Q12791 1236 aa11.97□□□□□ -0.49
IFT88-204ENST00000461115 DPY19L2P1Q6NXN4 242 aa11.97□□□□□ -0.49
IFT88-204ENST00000461115 PADI6Q6TGC4 694 aa11.97□□□□□ -0.49
IFT88-204ENST00000461115 DLK2Q6UY11 383 aa11.97□□□□□ -0.49
IFT88-204ENST00000461115 STXBP4Q6ZWJ1 553 aa11.97□□□□□ -0.49
IFT88-204ENST00000461115 FAM133AQ8N9E0 248 aa11.97□□□□□ -0.49
IFT88-204ENST00000461115 BANK1Q8NDB2 785 aa11.97□□□□□ -0.49
IFT88-204ENST00000461115 CPLX3Q8WVH0 158 aa11.97□□□□□ -0.49
IFT88-204ENST00000461115 PURBQ96QR8 312 aaKnown RBP11.97□□□□□ -0.49
IFT88-204ENST00000461115 TAF1DQ9H5J8 278 aaPredicted RBP11.97□□□□□ -0.49
IFT88-204ENST00000461115 MRPL44Q9H9J2 332 aaKnown RBP11.97□□□□□ -0.49
IFT88-204ENST00000461115 CGNQ9P2M7 1197 aaKnown RBP11.97□□□□□ -0.49
IFT88-204ENST00000461115 PCDHA10Q9Y5I2 948 aa11.97□□□□□ -0.49
IFT88-204ENST00000461115 UQCRHLA0A096LP55 91 aa11.96□□□□□ -0.49
IFT88-204ENST00000461115 GTPBP10A4D1E9 387 aaKnown RBP11.96□□□□□ -0.49
IFT88-204ENST00000461115 EIF3JO75822 258 aaKnown RBP11.96□□□□□ -0.49
IFT88-204ENST00000461115 SLC25A27O95847 323 aa11.96□□□□□ -0.49
IFT88-204ENST00000461115 UQCRHP07919 91 aa11.96□□□□□ -0.49
IFT88-204ENST00000461115 YWHABP31946 246 aaKnown RBP11.96□□□□□ -0.49
IFT88-204ENST00000461115 MTF1Q14872 753 aa11.96□□□□□ -0.49
IFT88-204ENST00000461115 GNPTABQ3T906 1256 aa11.96□□□□□ -0.49
IFT88-204ENST00000461115 PNMA8AQ86V59 439 aaPredicted RBP11.96□□□□□ -0.49
IFT88-204ENST00000461115 SPNS2Q8IVW8 549 aa11.96□□□□□ -0.49
IFT88-204ENST00000461115 NELFCDQ8IXH7 590 aa11.96□□□□□ -0.49
IFT88-204ENST00000461115 CCDC170Q8IYT3 715 aa11.96□□□□□ -0.49
IFT88-204ENST00000461115 MYCT1Q8N699 235 aa11.96□□□□□ -0.49
IFT88-204ENST00000461115 GOLGA5Q8TBA6 731 aa11.96□□□□□ -0.49
IFT88-204ENST00000461115 BAP1Q92560 729 aa11.96□□□□□ -0.49
IFT88-204ENST00000461115 SYN2Q92777 582 aaPredicted RBP11.96□□□□□ -0.49
IFT88-204ENST00000461115 EEF2KMTQ96G04 330 aa11.96□□□□□ -0.49
IFT88-204ENST00000461115 SPATC1LQ9H0A9 340 aa11.96□□□□□ -0.49
IFT88-204ENST00000461115 NUCKS1Q9H1E3 243 aaKnown RBP11.96□□□□□ -0.49
IFT88-204ENST00000461115 BCAS3Q9H6U6 928 aa11.96□□□□□ -0.49
IFT88-204ENST00000461115 PDLIM7Q9NR12 457 aa11.96□□□□□ -0.49
IFT88-204ENST00000461115 LARSQ9P2J5 1176 aaKnown RBP11.96□□□□□ -0.49
IFT88-204ENST00000461115 FBXL5Q9UKA1 691 aa11.96□□□□□ -0.49
IFT88-204ENST00000461115 EPN1Q9Y6I3 576 aaPredicted RBP11.96□□□□□ -0.49
IFT88-204ENST00000461115 IGKV6D-21A0A0A0MT36 114 aa11.95□□□□□ -0.5
IFT88-204ENST00000461115 TESPA1A2RU30 521 aaPredicted RBP11.95□□□□□ -0.5
IFT88-204ENST00000461115 FANCGO15287 622 aa11.95□□□□□ -0.5
IFT88-204ENST00000461115 GRIN3BO60391 1043 aa11.95□□□□□ -0.5
IFT88-204ENST00000461115 HIP1RO75146 1068 aa11.95□□□□□ -0.5
IFT88-204ENST00000461115 PRPF6O94906 941 aaKnown RBP11.95□□□□□ -0.5
IFT88-204ENST00000461115 NDUFA10O95299 355 aa11.95□□□□□ -0.5
IFT88-204ENST00000461115 LCA5LO95447 670 aa11.95□□□□□ -0.5
IFT88-204ENST00000461115 NR3C1P04150 777 aa11.95□□□□□ -0.5
IFT88-204ENST00000461115 TRIM21P19474 475 aaKnown RBP11.95□□□□□ -0.5
IFT88-204ENST00000461115 RTP1P59025 263 aa11.95□□□□□ -0.5
IFT88-204ENST00000461115 HERVK_113P62684 666 aa11.95□□□□□ -0.5
IFT88-204ENST00000461115 GTF2BQ00403 316 aa11.95□□□□□ -0.5
IFT88-204ENST00000461115 PRKG1Q13976 671 aa11.95□□□□□ -0.5
IFT88-204ENST00000461115 STXBP2Q15833 593 aa11.95□□□□□ -0.5
IFT88-204ENST00000461115 UGCGQ16739 394 aa11.95□□□□□ -0.5
IFT88-204ENST00000461115 ABHD15Q6UXT9 468 aa11.95□□□□□ -0.5
IFT88-204ENST00000461115 FASTKD5Q7L8L6 764 aaKnown RBP11.95□□□□□ -0.5
IFT88-204ENST00000461115 HVCN1Q96D96 273 aa11.95□□□□□ -0.5
IFT88-204ENST00000461115 CLMNQ96JQ2 1002 aa11.95□□□□□ -0.5
IFT88-204ENST00000461115 NTPCRQ9BSD7 190 aaKnown RBP11.95□□□□□ -0.5
IFT88-204ENST00000461115 ASCC2Q9H1I8 757 aaPredicted RBP11.95□□□□□ -0.5
IFT88-204ENST00000461115 ELP3Q9H9T3 547 aa11.95□□□□□ -0.5
IFT88-204ENST00000461115 C17orf75Q9HAS0 396 aa11.95□□□□□ -0.5
IFT88-204ENST00000461115 PLCB1Q9NQ66 1216 aa11.95□□□□□ -0.5
IFT88-204ENST00000461115 AGPAT5Q9NUQ2 364 aa11.95□□□□□ -0.5
IFT88-204ENST00000461115 MYO1AQ9UBC5 1043 aa11.95□□□□□ -0.5
IFT88-204ENST00000461115 SLC45A1Q9Y2W3 748 aa11.95□□□□□ -0.5
IFT88-204ENST00000461115 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.95□□□□□ -0.5
IFT88-204ENST00000461115 SIP14410 1827 aa11.95□□□□□ -0.5
IFT88-204ENST00000461115 IGSF9BQ9UPX0 1349 aa11.95□□□□□ -0.5
IFT88-204ENST00000461115 DNAJC25-GNG10A0A024R161 153 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 EIF3CLB5ME19 914 aaKnown RBP11.94□□□□□ -0.5
IFT88-204ENST00000461115 MAPK13O15264 365 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 AKAP3O75969 853 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 NOL4O94818 638 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 GCNT3O95395 438 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 TGFB3P10600 412 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 PLS3P13797 630 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 NMT1P30419 496 aaKnown RBP11.94□□□□□ -0.5
IFT88-204ENST00000461115 KLK7P49862 253 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 ALDH5A1P51649 535 aaPredicted RBP11.94□□□□□ -0.5
IFT88-204ENST00000461115 NCKAP1LP55160 1127 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 CCDC40Q4G0X9 1142 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 GPAT2Q6NUI2 795 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 ARMC9Q7Z3E5 817 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 CREBRFQ8IUR6 639 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 FAM178BQ8IXR5 827 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 SHCBP1Q8NEM2 672 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 ZNF397Q8NF99 534 aaPredicted RBP11.94□□□□□ -0.5
IFT88-204ENST00000461115 MORC4Q8TE76 937 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 GTF3C2Q8WUA4 911 aaPredicted RBP11.94□□□□□ -0.5
IFT88-204ENST00000461115 ATP6V0A1Q93050 837 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 DRC1Q96MC2 740 aa11.94□□□□□ -0.5
IFT88-204ENST00000461115 EIF3CQ99613 913 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms