RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 SPATA31C1P0DKV0 1188 aa12.36□□□□□ -0.43
APTX-209ENST00000460940 TMOD1P28289 359 aa12.36□□□□□ -0.43
APTX-209ENST00000460940 LONP1P36776 959 aaKnown RBP12.36□□□□□ -0.43
APTX-209ENST00000460940 RFC5P40937 340 aa12.36□□□□□ -0.43
APTX-209ENST00000460940 PKP1Q13835 747 aa12.36□□□□□ -0.43
APTX-209ENST00000460940 PTPAQ15257 358 aa12.36□□□□□ -0.43
APTX-209ENST00000460940 IL17AQ16552 155 aa12.36□□□□□ -0.43
APTX-209ENST00000460940 MTERF2Q49AM1 385 aa12.36□□□□□ -0.43
APTX-209ENST00000460940 ZNF618Q5T7W0 954 aa12.36□□□□□ -0.43
APTX-209ENST00000460940 FAM173BQ6P4H8 233 aa12.36□□□□□ -0.43
APTX-209ENST00000460940 TRAF7Q6Q0C0 670 aa12.36□□□□□ -0.43
APTX-209ENST00000460940 TRMT1LQ7Z2T5 733 aaKnown RBP12.36□□□□□ -0.43
APTX-209ENST00000460940 CATSPER3Q86XQ3 398 aa12.36□□□□□ -0.43
APTX-209ENST00000460940 KCTD17Q8N5Z5 321 aa12.36□□□□□ -0.43
APTX-209ENST00000460940 LINC01465Q8N7H1 131 aa12.36□□□□□ -0.43
APTX-209ENST00000460940 SNX29Q8TEQ0 813 aa12.36□□□□□ -0.43
APTX-209ENST00000460940 CCDC43Q96MW1 224 aaKnown RBP12.36□□□□□ -0.43
APTX-209ENST00000460940 NACC1Q96RE7 527 aa12.36□□□□□ -0.43
APTX-209ENST00000460940 FAM49AQ9H0Q0 323 aaPredicted RBP12.36□□□□□ -0.43
APTX-209ENST00000460940 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.36□□□□□ -0.43
APTX-209ENST00000460940 CLIC4Q9Y696 253 aa12.36□□□□□ -0.43
APTX-209ENST00000460940 TRIP12Q14669 1992 aaPredicted RBP12.36□□□□□ -0.43
APTX-209ENST00000460940 KDM3AQ9Y4C1 1321 aa12.36□□□□□ -0.43
APTX-209ENST00000460940 M0QZ92 97 aa12.36□□□□□ -0.43
APTX-209ENST00000460940 GAS2O43903 313 aaKnown RBP12.36□□□□□ -0.43
APTX-209ENST00000460940 MED24O75448 989 aa12.36□□□□□ -0.43
APTX-209ENST00000460940 CCT6AP40227 531 aaKnown RBP12.36□□□□□ -0.43
APTX-209ENST00000460940 MRPS6P82932 125 aaKnown RBP12.36□□□□□ -0.43
APTX-209ENST00000460940 IER5Q5VY09 327 aa12.36□□□□□ -0.43
APTX-209ENST00000460940 PLA2G4FQ68DD2 849 aa12.36□□□□□ -0.43
APTX-209ENST00000460940 DNAJB3Q8WWF6 145 aa12.36□□□□□ -0.43
APTX-209ENST00000460940 SLC7A3Q8WY07 619 aa12.36□□□□□ -0.43
APTX-209ENST00000460940 SCLYQ96I15 445 aa12.36□□□□□ -0.43
APTX-209ENST00000460940 CEP170P1Q96L14 293 aa12.36□□□□□ -0.43
APTX-209ENST00000460940 USP28Q96RU2 1077 aa12.36□□□□□ -0.43
APTX-209ENST00000460940 CEP89Q96ST8 783 aa12.36□□□□□ -0.43
APTX-209ENST00000460940 FTOQ9C0B1 505 aaKnown RBP eCLIP12.36□□□□□ -0.43
APTX-209ENST00000460940 DBR1Q9UK59 544 aaKnown RBP12.36□□□□□ -0.43
APTX-209ENST00000460940 ATP6V1DQ9Y5K8 247 aa12.36□□□□□ -0.43
APTX-209ENST00000460940 IGKV6-21A0A0C4DH24 114 aa12.35□□□□□ -0.43
APTX-209ENST00000460940 MAFO75444 373 aaPredicted RBP12.35□□□□□ -0.43
APTX-209ENST00000460940 YEATS4O95619 227 aa12.35□□□□□ -0.43
APTX-209ENST00000460940 CXCL10P02778 98 aa12.35□□□□□ -0.43
APTX-209ENST00000460940 CTSHP09668 335 aa12.35□□□□□ -0.43
APTX-209ENST00000460940 SLC39A14Q15043 492 aa12.35□□□□□ -0.43
APTX-209ENST00000460940 FOXD4L5Q5VV16 416 aaPredicted RBP12.35□□□□□ -0.43
APTX-209ENST00000460940 KIAA0319LQ8IZA0 1049 aa12.35□□□□□ -0.43
APTX-209ENST00000460940 METTL13Q8N6R0 699 aa12.35□□□□□ -0.43
APTX-209ENST00000460940 FOXD4L4Q8WXT5 416 aaPredicted RBP12.35□□□□□ -0.43
APTX-209ENST00000460940 ZBTB10Q96DT7 871 aa12.35□□□□□ -0.43
APTX-209ENST00000460940 MYH15Q9Y2K3 1946 aa12.35□□□□□ -0.43
APTX-209ENST00000460940 TMEM150BA6NC51 233 aa12.34□□□□□ -0.43
APTX-209ENST00000460940 DNM2P50570 870 aa12.34□□□□□ -0.43
APTX-209ENST00000460940 POLGP54098 1239 aaPredicted RBP12.34□□□□□ -0.43
APTX-209ENST00000460940 NUCB2P80303 420 aa12.34□□□□□ -0.43
APTX-209ENST00000460940 MGAT3Q09327 533 aa12.34□□□□□ -0.43
APTX-209ENST00000460940 STK38Q15208 465 aa12.34□□□□□ -0.43
APTX-209ENST00000460940 XKR9Q5GH70 373 aa12.34□□□□□ -0.43
APTX-209ENST00000460940 HYIQ5T013 277 aa12.34□□□□□ -0.43
APTX-209ENST00000460940 EFCAB12Q6NXP0 572 aa12.34□□□□□ -0.43
APTX-209ENST00000460940 POTEGQ6S5H5 508 aa12.34□□□□□ -0.43
APTX-209ENST00000460940 FAM43BQ6ZT52 329 aaPredicted RBP12.34□□□□□ -0.43
APTX-209ENST00000460940 NT5C3AQ9H0P0 336 aa12.34□□□□□ -0.43
APTX-209ENST00000460940 MTIF3Q9H2K0 278 aaKnown RBP12.34□□□□□ -0.43
APTX-209ENST00000460940 DHX33Q9H6R0 707 aaKnown RBP12.34□□□□□ -0.43
APTX-209ENST00000460940 CFAP45Q9UL16 551 aa12.34□□□□□ -0.43
APTX-209ENST00000460940 SRPRBQ9Y5M8 271 aaKnown RBP12.34□□□□□ -0.43
APTX-209ENST00000460940 TRPV2Q9Y5S1 764 aa12.34□□□□□ -0.43
APTX-209ENST00000460940 SQORQ9Y6N5 450 aa12.34□□□□□ -0.43
APTX-209ENST00000460940 DGAT1O75907 488 aa12.34□□□□□ -0.43
APTX-209ENST00000460940 ACTN1P12814 892 aa12.34□□□□□ -0.43
APTX-209ENST00000460940 RARRES1P49788 294 aa12.34□□□□□ -0.43
APTX-209ENST00000460940 CLCN3P51790 818 aa12.34□□□□□ -0.43
APTX-209ENST00000460940 EPHB4P54760 987 aa12.34□□□□□ -0.43
APTX-209ENST00000460940 NPEPPSP55786 919 aa12.34□□□□□ -0.43
APTX-209ENST00000460940 CDC42EP1Q00587 391 aa12.34□□□□□ -0.43
APTX-209ENST00000460940 CEBPZQ03701 1054 aaKnown RBP12.34□□□□□ -0.43
APTX-209ENST00000460940 MBTPS1Q14703 1052 aa12.34□□□□□ -0.43
APTX-209ENST00000460940 TDHQ8IZJ6 230 aa12.34□□□□□ -0.43
APTX-209ENST00000460940 KRI1Q8N9T8 703 aaKnown RBP12.34□□□□□ -0.43
APTX-209ENST00000460940 USP38Q8NB14 1042 aa12.34□□□□□ -0.43
APTX-209ENST00000460940 LINC00301Q8NCQ3 95 aa12.34□□□□□ -0.43
APTX-209ENST00000460940 PCDH10Q9P2E7 1040 aa12.34□□□□□ -0.43
APTX-209ENST00000460940 FBXO2Q9UK22 296 aaPredicted RBP12.34□□□□□ -0.43
APTX-209ENST00000460940 COLQQ9Y215 455 aaPredicted RBP12.34□□□□□ -0.43
APTX-209ENST00000460940 CDY2AQ9Y6F7 541 aa12.34□□□□□ -0.43
APTX-209ENST00000460940 TRIOBPQ9H2D6 2365 aa12.34□□□□□ -0.43
APTX-209ENST00000460940 PP2D1A8MPX8 630 aa12.33□□□□□ -0.44
APTX-209ENST00000460940 NBNO60934 754 aa12.33□□□□□ -0.44
APTX-209ENST00000460940 PPP6R2O75170 966 aa12.33□□□□□ -0.44
APTX-209ENST00000460940 CHRNA1P02708 482 aa12.33□□□□□ -0.44
APTX-209ENST00000460940 CHRM1P11229 460 aaPredicted RBP12.33□□□□□ -0.44
APTX-209ENST00000460940 UBA7P41226 1012 aa12.33□□□□□ -0.44
APTX-209ENST00000460940 EMC2Q15006 297 aa12.33□□□□□ -0.44
APTX-209ENST00000460940 TMEM240Q5SV17 173 aa12.33□□□□□ -0.44
APTX-209ENST00000460940 DEFB128Q7Z7B8 93 aa12.33□□□□□ -0.44
APTX-209ENST00000460940 LRRC71Q8N4P6 559 aa12.33□□□□□ -0.44
APTX-209ENST00000460940 MYRIPQ8NFW9 859 aa12.33□□□□□ -0.44
APTX-209ENST00000460940 KCNG4Q8TDN1 519 aa12.33□□□□□ -0.44
APTX-209ENST00000460940 PIGOQ8TEQ8 1089 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms