RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 RGS18Q9NS28 235 aa25.71■■□□□ 1.71
PTPN4-207ENST00000460162 ST3GAL5Q9UNP4 418 aa25.71■■□□□ 1.71
PTPN4-207ENST00000460162 CYP3A7-CYP3A51PA0A087WV96 503 aa25.7■■□□□ 1.7
PTPN4-207ENST00000460162 GPR32O75388 356 aa25.7■■□□□ 1.7
PTPN4-207ENST00000460162 TDP2O95551 362 aa25.7■■□□□ 1.7
PTPN4-207ENST00000460162 VTNP04004 478 aa25.7■■□□□ 1.7
PTPN4-207ENST00000460162 CYP3A7P24462 503 aa25.7■■□□□ 1.7
PTPN4-207ENST00000460162 TMOD1P28289 359 aa25.7■■□□□ 1.7
PTPN4-207ENST00000460162 PAN2Q504Q3 1202 aaKnown RBP25.7■■□□□ 1.7
PTPN4-207ENST00000460162 PTCRAQ6ISU1 281 aaPredicted RBP25.7■■□□□ 1.7
PTPN4-207ENST00000460162 SLC24A5Q71RS6 500 aa25.7■■□□□ 1.7
PTPN4-207ENST00000460162 FAM228AQ86W67 206 aa25.7■■□□□ 1.7
PTPN4-207ENST00000460162 PPP1R16BQ96T49 567 aa25.7■■□□□ 1.7
PTPN4-207ENST00000460162 ADAM2Q99965 735 aa25.7■■□□□ 1.7
PTPN4-207ENST00000460162 LARP6Q9BRS8 491 aaKnown RBP25.7■■□□□ 1.7
PTPN4-207ENST00000460162 NRBP2Q9NSY0 501 aa25.7■■□□□ 1.7
PTPN4-207ENST00000460162 PCDHB7Q9Y5E2 793 aa25.7■■□□□ 1.7
PTPN4-207ENST00000460162 STK36Q9NRP7 1315 aa25.69■■□□□ 1.7
PTPN4-207ENST00000460162 PLXNA4Q9HCM2 1894 aa25.69■■□□□ 1.7
PTPN4-207ENST00000460162 PSMD10O75832 226 aa25.69■■□□□ 1.7
PTPN4-207ENST00000460162 CLCN3P51790 818 aa25.69■■□□□ 1.7
PTPN4-207ENST00000460162 NONOQ15233 471 aaKnown RBP eCLIP25.69■■□□□ 1.7
PTPN4-207ENST00000460162 UGCGQ16739 394 aa25.69■■□□□ 1.7
PTPN4-207ENST00000460162 MBOAT7Q96N66 472 aa25.69■■□□□ 1.7
PTPN4-207ENST00000460162 C9IYK1 514 aa25.68■■□□□ 1.7
PTPN4-207ENST00000460162 EFCAB12Q6NXP0 572 aa25.68■■□□□ 1.7
PTPN4-207ENST00000460162 KRT25Q7Z3Z0 450 aa25.68■■□□□ 1.7
PTPN4-207ENST00000460162 AIFM3Q96NN9 605 aa25.68■■□□□ 1.7
PTPN4-207ENST00000460162 CLDND1Q9NY35 253 aa25.68■■□□□ 1.7
PTPN4-207ENST00000460162 PLAGL2Q9UPG8 496 aa25.68■■□□□ 1.7
PTPN4-207ENST00000460162 AKT3Q9Y243 479 aa25.68■■□□□ 1.7
PTPN4-207ENST00000460162 GRXCR2A6NFK2 248 aa25.67■■□□□ 1.7
PTPN4-207ENST00000460162 H3BQ06 376 aaPredicted RBP25.67■■□□□ 1.7
PTPN4-207ENST00000460162 IL9P15248 144 aa25.67■■□□□ 1.7
PTPN4-207ENST00000460162 GATMP50440 423 aa25.67■■□□□ 1.7
PTPN4-207ENST00000460162 ANAPC15P60006 121 aa25.67■■□□□ 1.7
PTPN4-207ENST00000460162 SCRN1Q12765 414 aa25.67■■□□□ 1.7
PTPN4-207ENST00000460162 B3GNT9Q6UX72 402 aa25.67■■□□□ 1.7
PTPN4-207ENST00000460162 MIER3Q7Z3K6 550 aa25.67■■□□□ 1.7
PTPN4-207ENST00000460162 FAM178BQ8IXR5 827 aa25.67■■□□□ 1.7
PTPN4-207ENST00000460162 LRRC71Q8N4P6 559 aa25.67■■□□□ 1.7
PTPN4-207ENST00000460162 ETNPPLQ8TBG4 499 aa25.67■■□□□ 1.7
PTPN4-207ENST00000460162 ALG13Q9NP73 1137 aaKnown RBP25.67■■□□□ 1.7
PTPN4-207ENST00000460162 FAM50BQ9Y247 325 aa25.67■■□□□ 1.7
PTPN4-207ENST00000460162 ITGB1P05556 798 aa25.66■■□□□ 1.7
PTPN4-207ENST00000460162 NLRP11P59045 1033 aaKnown RBP25.66■■□□□ 1.7
PTPN4-207ENST00000460162 CTC1Q2NKJ3 1217 aa25.66■■□□□ 1.7
PTPN4-207ENST00000460162 EP400NLQ6ZTU2 488 aa25.66■■□□□ 1.7
PTPN4-207ENST00000460162 GJA10Q969M2 543 aa25.66■■□□□ 1.7
PTPN4-207ENST00000460162 PPP2R3CQ969Q6 453 aa25.66■■□□□ 1.7
PTPN4-207ENST00000460162 PHF20Q9BVI0 1012 aa25.66■■□□□ 1.7
PTPN4-207ENST00000460162 SLKQ9H2G2 1235 aaPredicted RBP25.66■■□□□ 1.7
PTPN4-207ENST00000460162 ADAMTS10Q9H324 1103 aa25.66■■□□□ 1.7
PTPN4-207ENST00000460162 ELAC1Q9H777 363 aaKnown RBP25.66■■□□□ 1.7
PTPN4-207ENST00000460162 TMEM161AQ9NX61 479 aa25.66■■□□□ 1.7
PTPN4-207ENST00000460162 XBP1P17861 261 aa25.65■■□□□ 1.7
PTPN4-207ENST00000460162 COL9A1P20849 921 aa25.65■■□□□ 1.7
PTPN4-207ENST00000460162 IBSPP21815 317 aaPredicted RBP25.65■■□□□ 1.7
PTPN4-207ENST00000460162 TBC1D8BQ0IIM8 1120 aa25.65■■□□□ 1.7
PTPN4-207ENST00000460162 HYAL1Q12794 435 aa25.65■■□□□ 1.7
PTPN4-207ENST00000460162 CAMK1Q14012 370 aa25.65■■□□□ 1.7
PTPN4-207ENST00000460162 DSC3Q14574 896 aa25.65■■□□□ 1.7
PTPN4-207ENST00000460162 KLHL23Q8NBE8 558 aa25.65■■□□□ 1.7
PTPN4-207ENST00000460162 DDX25Q9UHL0 483 aaKnown RBP25.65■■□□□ 1.7
PTPN4-207ENST00000460162 PFKFB2O60825 505 aa25.64■■□□□ 1.7
PTPN4-207ENST00000460162 EIF4BP23588 611 aaKnown RBP25.64■■□□□ 1.7
PTPN4-207ENST00000460162 TARBP2Q15633 366 aaKnown RBP25.64■■□□□ 1.7
PTPN4-207ENST00000460162 INF2Q27J81 1249 aa25.64■■□□□ 1.7
PTPN4-207ENST00000460162 SPPL3Q8TCT6 385 aa25.64■■□□□ 1.7
PTPN4-207ENST00000460162 ATP6V0A4Q9HBG4 840 aa25.64■■□□□ 1.7
PTPN4-207ENST00000460162 AAASQ9NRG9 546 aa25.64■■□□□ 1.7
PTPN4-207ENST00000460162 PPP4R2Q9NY27 417 aa25.64■■□□□ 1.7
PTPN4-207ENST00000460162 SEPT9Q9UHD8 586 aaPredicted RBP25.64■■□□□ 1.7
PTPN4-207ENST00000460162 KCNJ14Q9UNX9 436 aa25.64■■□□□ 1.7
PTPN4-207ENST00000460162 CCDC194A0A1B0GVG4 234 aa25.63■■□□□ 1.69
PTPN4-207ENST00000460162 TBKBP1A7MCY6 615 aa25.63■■□□□ 1.69
PTPN4-207ENST00000460162 GPC3P51654 580 aa25.63■■□□□ 1.69
PTPN4-207ENST00000460162 FAM189BP81408 668 aa25.63■■□□□ 1.69
PTPN4-207ENST00000460162 ANKRD1Q15327 319 aa25.63■■□□□ 1.69
PTPN4-207ENST00000460162 XKR3Q5GH77 459 aa25.63■■□□□ 1.69
PTPN4-207ENST00000460162 GJD3Q8N144 294 aa25.63■■□□□ 1.69
PTPN4-207ENST00000460162 NIFKQ9BYG3 293 aaKnown RBP25.63■■□□□ 1.69
PTPN4-207ENST00000460162 TPCN1Q9ULQ1 816 aa25.63■■□□□ 1.69
PTPN4-207ENST00000460162 PCDHB12Q9Y5F1 795 aa25.63■■□□□ 1.69
PTPN4-207ENST00000460162 HOXA2O43364 376 aa25.62■■□□□ 1.69
PTPN4-207ENST00000460162 CSPG5O95196 566 aa25.62■■□□□ 1.69
PTPN4-207ENST00000460162 GCFC2P16383 781 aaKnown RBP25.62■■□□□ 1.69
PTPN4-207ENST00000460162 DNAJB1P25685 340 aa25.62■■□□□ 1.69
PTPN4-207ENST00000460162 LTBRP36941 435 aa25.62■■□□□ 1.69
PTPN4-207ENST00000460162 UBE3AQ05086 875 aa25.62■■□□□ 1.69
PTPN4-207ENST00000460162 CSPP1Q1MSJ5 1256 aa25.62■■□□□ 1.69
PTPN4-207ENST00000460162 ERICH6BQ5W0A0 696 aa25.62■■□□□ 1.69
PTPN4-207ENST00000460162 NEK8Q86SG6 692 aa25.62■■□□□ 1.69
PTPN4-207ENST00000460162 POF1BQ8WVV4 589 aa25.62■■□□□ 1.69
PTPN4-207ENST00000460162 SCLT1Q96NL6 688 aa25.62■■□□□ 1.69
PTPN4-207ENST00000460162 CD320Q9NPF0 282 aa25.62■■□□□ 1.69
PTPN4-207ENST00000460162 SLC37A4O43826 429 aa25.61■■□□□ 1.69
PTPN4-207ENST00000460162 DARSP14868 501 aaKnown RBP25.61■■□□□ 1.69
PTPN4-207ENST00000460162 ZSCAN20P17040 1043 aaPredicted RBP25.61■■□□□ 1.69
PTPN4-207ENST00000460162 LETM2Q2VYF4 491 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms