RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 LXNQ9BS40 222 aa19.81■□□□□ 0.76
HPS3-202ENST00000460120 RSPH14Q9UHP6 348 aa19.81■□□□□ 0.76
HPS3-202ENST00000460120 SAMM50Q9Y512 469 aa19.81■□□□□ 0.76
HPS3-202ENST00000460120 HOXA7P31268 230 aaPredicted RBP19.81■□□□□ 0.76
HPS3-202ENST00000460120 PRELPP51888 382 aa19.81■□□□□ 0.76
HPS3-202ENST00000460120 CEP55Q53EZ4 464 aa19.81■□□□□ 0.76
HPS3-202ENST00000460120 GLYCTKQ8IVS8 523 aa19.81■□□□□ 0.76
HPS3-202ENST00000460120 LARGE2Q8N3Y3 721 aa19.81■□□□□ 0.76
HPS3-202ENST00000460120 TMEM51Q9NW97 253 aa19.81■□□□□ 0.76
HPS3-202ENST00000460120 TMX2Q9Y320 296 aa19.81■□□□□ 0.76
HPS3-202ENST00000460120 PCDHGC5Q9Y5F6 944 aa19.81■□□□□ 0.76
HPS3-202ENST00000460120 VGLL3A8MV65 326 aa19.8■□□□□ 0.76
HPS3-202ENST00000460120 ZNF572Q7Z3I7 529 aaPredicted RBP19.8■□□□□ 0.76
HPS3-202ENST00000460120 LDHDQ86WU2 507 aa19.8■□□□□ 0.76
HPS3-202ENST00000460120 MSL3Q8N5Y2 521 aaKnown RBP19.8■□□□□ 0.76
HPS3-202ENST00000460120 CCDC43Q96MW1 224 aaKnown RBP19.8■□□□□ 0.76
HPS3-202ENST00000460120 SHTN1A0MZ66 631 aa19.8■□□□□ 0.76
HPS3-202ENST00000460120 CYP3A4P08684 503 aa19.8■□□□□ 0.76
HPS3-202ENST00000460120 EPHB4P54760 987 aa19.8■□□□□ 0.76
HPS3-202ENST00000460120 GRIPAP1Q4V328 841 aa19.8■□□□□ 0.76
HPS3-202ENST00000460120 LRRC31Q6UY01 552 aa19.8■□□□□ 0.76
HPS3-202ENST00000460120 ADAT2Q7Z6V5 191 aaKnown RBP19.8■□□□□ 0.76
HPS3-202ENST00000460120 SH2D3CQ8N5H7 860 aa19.8■□□□□ 0.76
HPS3-202ENST00000460120 ARL8AQ96BM9 186 aa19.8■□□□□ 0.76
HPS3-202ENST00000460120 HOOK2Q96ED9 719 aa19.8■□□□□ 0.76
HPS3-202ENST00000460120 PLCB1Q9NQ66 1216 aa19.8■□□□□ 0.76
HPS3-202ENST00000460120 TSKSQ9UJT2 592 aa19.8■□□□□ 0.76
HPS3-202ENST00000460120 ATRNL1Q5VV63 1379 aa19.79■□□□□ 0.76
HPS3-202ENST00000460120 DDX3XO00571 662 aaKnown RBP eCLIP19.79■□□□□ 0.765e-8■■■■□ 22.3
HPS3-202ENST00000460120 PLSCR1O15162 318 aa19.79■□□□□ 0.76
HPS3-202ENST00000460120 RAD51CO43502 376 aa19.79■□□□□ 0.76
HPS3-202ENST00000460120 KRT14P02533 472 aa19.79■□□□□ 0.76
HPS3-202ENST00000460120 PSMC2P35998 433 aaKnown RBP19.79■□□□□ 0.76
HPS3-202ENST00000460120 OGFOD1Q8N543 542 aa19.79■□□□□ 0.76
HPS3-202ENST00000460120 FLAD1Q8NFF5 587 aa19.79■□□□□ 0.76
HPS3-202ENST00000460120 METTL14Q9HCE5 456 aaKnown RBP19.79■□□□□ 0.76
HPS3-202ENST00000460120 OSGEPQ9NPF4 335 aa19.79■□□□□ 0.76
HPS3-202ENST00000460120 ARHGEF35A5YM69 484 aa19.79■□□□□ 0.76
HPS3-202ENST00000460120 PIK3CDO00329 1044 aa19.79■□□□□ 0.76
HPS3-202ENST00000460120 IPO5O00410 1097 aaKnown RBP19.79■□□□□ 0.76
HPS3-202ENST00000460120 EVI5O60447 810 aa19.79■□□□□ 0.76
HPS3-202ENST00000460120 FKBP1AP62942 108 aaKnown RBP19.79■□□□□ 0.76
HPS3-202ENST00000460120 HLTFQ14527 1009 aaKnown RBP eCLIP19.79■□□□□ 0.76
HPS3-202ENST00000460120 NAA35Q5VZE5 725 aa19.79■□□□□ 0.76
HPS3-202ENST00000460120 MCTP2Q6DN12 878 aa19.79■□□□□ 0.76
HPS3-202ENST00000460120 DAAM2Q86T65 1068 aa19.79■□□□□ 0.76
HPS3-202ENST00000460120 DDX42Q86XP3 938 aaKnown RBP eCLIP19.79■□□□□ 0.76
HPS3-202ENST00000460120 IL31RAQ8NI17 732 aa19.79■□□□□ 0.76
HPS3-202ENST00000460120 FAM76AQ8TAV0 307 aa19.79■□□□□ 0.76
HPS3-202ENST00000460120 C7orf43Q8WVR3 580 aa19.79■□□□□ 0.76
HPS3-202ENST00000460120 CASKIN2Q8WXE0 1202 aa19.79■□□□□ 0.76
HPS3-202ENST00000460120 EXOC3O60645 756 aa19.78■□□□□ 0.76
HPS3-202ENST00000460120 HIP1RO75146 1068 aa19.78■□□□□ 0.76
HPS3-202ENST00000460120 FLOT1O75955 427 aa19.78■□□□□ 0.76
HPS3-202ENST00000460120 PAXIP1Q6ZW49 1069 aaPredicted RBP19.78■□□□□ 0.76
HPS3-202ENST00000460120 IFT20Q8IY31 132 aa19.78■□□□□ 0.76
HPS3-202ENST00000460120 IPO4Q8TEX9 1081 aaKnown RBP19.78■□□□□ 0.76
HPS3-202ENST00000460120 INPP4AQ96PE3 977 aaPredicted RBP19.78■□□□□ 0.76
HPS3-202ENST00000460120 WDR11Q9BZH6 1224 aa19.78■□□□□ 0.76
HPS3-202ENST00000460120 HERC5Q9UII4 1024 aaKnown RBP19.78■□□□□ 0.76
HPS3-202ENST00000460120 DNAJC12Q9UKB3 198 aa19.78■□□□□ 0.76
HPS3-202ENST00000460120 NFIBO00712 420 aa19.78■□□□□ 0.76
HPS3-202ENST00000460120 HSF2BPO75031 334 aa19.78■□□□□ 0.76
HPS3-202ENST00000460120 KIF4AO95239 1232 aa19.78■□□□□ 0.76
HPS3-202ENST00000460120 DRAP1Q14919 205 aaPredicted RBP19.78■□□□□ 0.76
HPS3-202ENST00000460120 HS2ST1Q7LGA3 356 aa19.78■□□□□ 0.76
HPS3-202ENST00000460120 SLC5A5Q92911 643 aa19.78■□□□□ 0.76
HPS3-202ENST00000460120 OLFML3Q9NRN5 406 aa19.78■□□□□ 0.76
HPS3-202ENST00000460120 CHORDC1Q9UHD1 332 aaPredicted RBP19.78■□□□□ 0.76
HPS3-202ENST00000460120 CCPG1Q9ULG6 757 aa19.78■□□□□ 0.76
HPS3-202ENST00000460120 K7ENM7 598 aa19.77■□□□□ 0.76
HPS3-202ENST00000460120 PPP1R12BO60237 982 aaPredicted RBP19.77■□□□□ 0.76
HPS3-202ENST00000460120 GAP43P17677 238 aa19.77■□□□□ 0.76
HPS3-202ENST00000460120 ITIH3Q06033 890 aa19.77■□□□□ 0.76
HPS3-202ENST00000460120 BMT2Q1RMZ1 405 aa19.77■□□□□ 0.76
HPS3-202ENST00000460120 RSBN1LQ6PCB5 846 aaPredicted RBP19.77■□□□□ 0.76
HPS3-202ENST00000460120 ZNF720Q7Z2F6 126 aa19.77■□□□□ 0.76
HPS3-202ENST00000460120 PEX26Q7Z412 305 aa19.77■□□□□ 0.76
HPS3-202ENST00000460120 PLCD3Q8N3E9 789 aa19.77■□□□□ 0.76
HPS3-202ENST00000460120 ZIM3Q96PE6 472 aa19.77■□□□□ 0.76
HPS3-202ENST00000460120 TUFT1Q9NNX1 390 aa19.77■□□□□ 0.76
HPS3-202ENST00000460120 AGPAT3Q9NRZ7 376 aa19.77■□□□□ 0.76
HPS3-202ENST00000460120 FRMD4BQ9Y2L6 1034 aa19.77■□□□□ 0.76
HPS3-202ENST00000460120 TRIM66O15016 1216 aa19.77■□□□□ 0.76
HPS3-202ENST00000460120 H2AFZP0C0S5 128 aa19.77■□□□□ 0.76
HPS3-202ENST00000460120 INPP5BP32019 993 aa19.77■□□□□ 0.76
HPS3-202ENST00000460120 FMO5P49326 533 aa19.77■□□□□ 0.76
HPS3-202ENST00000460120 ATP1A2P50993 1020 aa19.77■□□□□ 0.76
HPS3-202ENST00000460120 DLG4P78352 724 aa19.77■□□□□ 0.76
HPS3-202ENST00000460120 PRPF4BQ13523 1007 aaKnown RBP19.77■□□□□ 0.76
HPS3-202ENST00000460120 H2AFVQ71UI9 128 aa19.77■□□□□ 0.76
HPS3-202ENST00000460120 USP38Q8NB14 1042 aa19.77■□□□□ 0.76
HPS3-202ENST00000460120 ZSWIM2Q8NEG5 633 aa19.77■□□□□ 0.76
HPS3-202ENST00000460120 LNX1Q8TBB1 728 aaPredicted RBP19.77■□□□□ 0.76
HPS3-202ENST00000460120 CHURC1Q8WUH1 139 aa19.77■□□□□ 0.76
HPS3-202ENST00000460120 ELMO3Q96BJ8 720 aa19.77■□□□□ 0.76
HPS3-202ENST00000460120 TEKT3Q9BXF9 490 aa19.77■□□□□ 0.76
HPS3-202ENST00000460120 ZNF341Q9BYN7 854 aa19.77■□□□□ 0.76
HPS3-202ENST00000460120 DDX47Q9H0S4 455 aaKnown RBP19.77■□□□□ 0.76
HPS3-202ENST00000460120 CENPHQ9H3R5 247 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms