RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 Q4G0T1 1027 aa17.51■□□□□ 0.39
SDF4-204ENST00000459994 TJAP1Q5JTD0 557 aa17.51■□□□□ 0.39
SDF4-204ENST00000459994 MIS18BP1Q6P0N0 1132 aa17.51■□□□□ 0.39
SDF4-204ENST00000459994 TSHZ1Q6ZSZ6 1077 aa17.51■□□□□ 0.39
SDF4-204ENST00000459994 RSPH3Q86UC2 560 aa17.51■□□□□ 0.39
SDF4-204ENST00000459994 ATP8B4Q8TF62 1192 aa17.51■□□□□ 0.39
SDF4-204ENST00000459994 APBB2Q92870 758 aa17.51■□□□□ 0.39
SDF4-204ENST00000459994 PPP1R16BQ96T49 567 aa17.51■□□□□ 0.39
SDF4-204ENST00000459994 BRWD1Q9NSI6 2320 aa17.51■□□□□ 0.39
SDF4-204ENST00000459994 MAFBQ9Y5Q3 323 aaPredicted RBP17.51■□□□□ 0.39
SDF4-204ENST00000459994 TRPV2Q9Y5S1 764 aa17.51■□□□□ 0.39
SDF4-204ENST00000459994 MORC2Q9Y6X9 1032 aaPredicted RBP17.51■□□□□ 0.39
SDF4-204ENST00000459994 ARID2Q68CP9 1835 aa17.51■□□□□ 0.39
SDF4-204ENST00000459994 MYH15Q9Y2K3 1946 aa17.51■□□□□ 0.39
SDF4-204ENST00000459994 MUC3AQ02505 3323 aa17.5■□□□□ 0.39
SDF4-204ENST00000459994 MYO7AQ13402 2215 aa17.5■□□□□ 0.39
SDF4-204ENST00000459994 SMIM35A0A1B0GVV1 85 aa17.5■□□□□ 0.39
SDF4-204ENST00000459994 GTPBP6O43824 516 aaPredicted RBP17.5■□□□□ 0.39
SDF4-204ENST00000459994 ZNF862O60290 1169 aa17.5■□□□□ 0.39
SDF4-204ENST00000459994 HBP1O60381 514 aa17.5■□□□□ 0.39
SDF4-204ENST00000459994 CCNT1O60563 726 aaKnown RBP17.5■□□□□ 0.39
SDF4-204ENST00000459994 KCNQ1P51787 676 aa17.5■□□□□ 0.39
SDF4-204ENST00000459994 TMEM266Q2M3C6 531 aa17.5■□□□□ 0.39
SDF4-204ENST00000459994 FOXD4L6Q3SYB3 417 aaPredicted RBP17.5■□□□□ 0.39
SDF4-204ENST00000459994 FAM160B1Q5W0V3 765 aa17.5■□□□□ 0.39
SDF4-204ENST00000459994 ZNF746Q6NUN9 644 aaPredicted RBP17.5■□□□□ 0.39
SDF4-204ENST00000459994 FOXD4L3Q6VB84 417 aaPredicted RBP17.5■□□□□ 0.39
SDF4-204ENST00000459994 TMEM40Q8WWA1 233 aa17.5■□□□□ 0.39
SDF4-204ENST00000459994 ASB2Q96Q27 587 aa17.5■□□□□ 0.39
SDF4-204ENST00000459994 YME1L1Q96TA2 773 aa17.5■□□□□ 0.39
SDF4-204ENST00000459994 UNC45AQ9H3U1 944 aa17.5■□□□□ 0.39
SDF4-204ENST00000459994 RC3H2Q9HBD1 1191 aaKnown RBP17.5■□□□□ 0.39
SDF4-204ENST00000459994 TBC1D22BQ9NU19 505 aa17.5■□□□□ 0.39
SDF4-204ENST00000459994 TFIP11Q9UBB9 837 aaKnown RBP17.5■□□□□ 0.39
SDF4-204ENST00000459994 GABBR1Q9UBS5 961 aa17.5■□□□□ 0.39
SDF4-204ENST00000459994 CEP131Q9UPN4 1083 aa17.5■□□□□ 0.39
SDF4-204ENST00000459994 IGSF9BQ9UPX0 1349 aa17.49■□□□□ 0.39
SDF4-204ENST00000459994 C22orf31O95567 290 aa17.49■□□□□ 0.39
SDF4-204ENST00000459994 YEATS4O95619 227 aa17.49■□□□□ 0.39
SDF4-204ENST00000459994 MCM7P33993 719 aa17.49■□□□□ 0.39
SDF4-204ENST00000459994 NBR1Q14596 966 aa17.49■□□□□ 0.39
SDF4-204ENST00000459994 PTPAQ15257 358 aa17.49■□□□□ 0.39
SDF4-204ENST00000459994 SF3A1Q15459 793 aaKnown RBP17.49■□□□□ 0.39
SDF4-204ENST00000459994 SKIV2LQ15477 1246 aaKnown RBP17.49■□□□□ 0.39
SDF4-204ENST00000459994 KIAA0319LQ8IZA0 1049 aa17.49■□□□□ 0.39
SDF4-204ENST00000459994 FBXO22Q8NEZ5 403 aa17.49■□□□□ 0.39
SDF4-204ENST00000459994 ATXN2LQ8WWM7 1075 aaKnown RBP17.49■□□□□ 0.39
SDF4-204ENST00000459994 SLC5A5Q92911 643 aa17.49■□□□□ 0.39
SDF4-204ENST00000459994 CELF4Q9BZC1 486 aaKnown RBP17.49■□□□□ 0.39
SDF4-204ENST00000459994 TMX1Q9H3N1 280 aa17.49■□□□□ 0.39
SDF4-204ENST00000459994 DDX25Q9UHL0 483 aaKnown RBP17.49■□□□□ 0.39
SDF4-204ENST00000459994 RCOR1Q9UKL0 485 aa17.49■□□□□ 0.39
SDF4-204ENST00000459994 PADI3Q9ULW8 664 aa17.49■□□□□ 0.39
SDF4-204ENST00000459994 CLIC4Q9Y696 253 aa17.49■□□□□ 0.39
SDF4-204ENST00000459994 TCHHQ07283 1943 aa17.49■□□□□ 0.39
SDF4-204ENST00000459994 LAD1O00515 517 aa17.48■□□□□ 0.39
SDF4-204ENST00000459994 TBX3O15119 743 aa17.48■□□□□ 0.39
SDF4-204ENST00000459994 CHMP2AO43633 222 aa17.48■□□□□ 0.39
SDF4-204ENST00000459994 MGEA5O60502 916 aa17.48■□□□□ 0.39
SDF4-204ENST00000459994 SLC26A2P50443 739 aa17.48■□□□□ 0.39
SDF4-204ENST00000459994 KRT76Q01546 638 aa17.48■□□□□ 0.39
SDF4-204ENST00000459994 SLC39A14Q15043 492 aa17.48■□□□□ 0.39
SDF4-204ENST00000459994 EPC2Q52LR7 807 aa17.48■□□□□ 0.39
SDF4-204ENST00000459994 IER5Q5VY09 327 aa17.48■□□□□ 0.39
SDF4-204ENST00000459994 CRIPAKQ8N1N5 446 aa17.48■□□□□ 0.39
SDF4-204ENST00000459994 C4orf32Q8N8J7 132 aa17.48■□□□□ 0.39
SDF4-204ENST00000459994 LINC00301Q8NCQ3 95 aa17.48■□□□□ 0.39
SDF4-204ENST00000459994 NECAB3Q96P71 396 aaPredicted RBP17.48■□□□□ 0.39
SDF4-204ENST00000459994 SCAND2PQ9GZW5 306 aaPredicted RBP17.48■□□□□ 0.39
SDF4-204ENST00000459994 PCDHA10Q9Y5I2 948 aa17.48■□□□□ 0.39
SDF4-204ENST00000459994 COL1A2P08123 1366 aa17.48■□□□□ 0.39
SDF4-204ENST00000459994 SLC37A4O43826 429 aa17.47■□□□□ 0.39
SDF4-204ENST00000459994 NEMFO60524 1076 aa17.47■□□□□ 0.39
SDF4-204ENST00000459994 PSMD10O75832 226 aa17.47■□□□□ 0.39
SDF4-204ENST00000459994 BAG4O95429 457 aaKnown RBP17.47■□□□□ 0.39
SDF4-204ENST00000459994 VTNP04004 478 aa17.47■□□□□ 0.39
SDF4-204ENST00000459994 PSAPP07602 524 aa17.47■□□□□ 0.39
SDF4-204ENST00000459994 GATMP50440 423 aa17.47■□□□□ 0.39
SDF4-204ENST00000459994 MRPS5P82675 430 aaKnown RBP17.47■□□□□ 0.39
SDF4-204ENST00000459994 ATP2C1P98194 919 aaPredicted RBP17.47■□□□□ 0.39
SDF4-204ENST00000459994 PTGDRQ13258 359 aa17.47■□□□□ 0.39
SDF4-204ENST00000459994 ZNF484Q5JVG2 852 aa17.47■□□□□ 0.39
SDF4-204ENST00000459994 CKAP2LQ8IYA6 745 aa17.47■□□□□ 0.39
SDF4-204ENST00000459994 BBXQ8WY36 941 aaPredicted RBP17.47■□□□□ 0.39
SDF4-204ENST00000459994 ZNF689Q96CS4 500 aaPredicted RBP17.47■□□□□ 0.39
SDF4-204ENST00000459994 CHAMP1Q96JM3 812 aa17.47■□□□□ 0.39
SDF4-204ENST00000459994 MTMR9Q96QG7 549 aa17.47■□□□□ 0.39
SDF4-204ENST00000459994 GINS2Q9Y248 185 aa17.47■□□□□ 0.39
SDF4-204ENST00000459994 NOC2LQ9Y3T9 749 aaKnown RBP17.47■□□□□ 0.39
SDF4-204ENST00000459994 SAMM50Q9Y512 469 aa17.47■□□□□ 0.39
SDF4-204ENST00000459994 KDM3AQ9Y4C1 1321 aa17.47■□□□□ 0.39
SDF4-204ENST00000459994 TMEM150BA6NC51 233 aa17.46■□□□□ 0.39
SDF4-204ENST00000459994 NCLP19338 710 aaKnown RBP17.46■□□□□ 0.39
SDF4-204ENST00000459994 PRPHP41219 470 aa17.46■□□□□ 0.39
SDF4-204ENST00000459994 CLCN3P51790 818 aa17.46■□□□□ 0.39
SDF4-204ENST00000459994 CEBPZQ03701 1054 aaKnown RBP17.46■□□□□ 0.39
SDF4-204ENST00000459994 STK38Q15208 465 aa17.46■□□□□ 0.39
SDF4-204ENST00000459994 LRCH2Q5VUJ6 765 aa17.46■□□□□ 0.39
SDF4-204ENST00000459994 ARL6IP4Q66PJ3 421 aaKnown RBP17.46■□□□□ 0.39
SDF4-204ENST00000459994 B3GNT9Q6UX72 402 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms