RNA–Protein interactions for RNA: ENST00000458709.1

PRAMEF35P-201, Transcript of PRAME family member 35, pseudogene, humanhuman

BASIC

Gene PRAMEF35P, Length 891 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF35P-201ENST00000458709 IFIT3O14879 490 aaKnown RBP12.87□□□□□ -0.35
PRAMEF35P-201ENST00000458709 CYP21A2P08686 494 aa12.87□□□□□ -0.35
PRAMEF35P-201ENST00000458709 RBM25P49756 843 aaKnown RBP12.87□□□□□ -0.35
PRAMEF35P-201ENST00000458709 ITIH3Q06033 890 aa12.87□□□□□ -0.35
PRAMEF35P-201ENST00000458709 ANGPT1Q15389 498 aa12.87□□□□□ -0.35
PRAMEF35P-201ENST00000458709 RARS2Q5T160 578 aaKnown RBP12.87□□□□□ -0.35
PRAMEF35P-201ENST00000458709 KANK3Q6NY19 840 aa12.87□□□□□ -0.35
PRAMEF35P-201ENST00000458709 MTHFD1LQ6UB35 978 aa12.87□□□□□ -0.35
PRAMEF35P-201ENST00000458709 KCNT2Q6UVM3 1135 aa12.87□□□□□ -0.35
PRAMEF35P-201ENST00000458709 TMC7Q7Z402 723 aa12.87□□□□□ -0.35
PRAMEF35P-201ENST00000458709 FBXL16Q8N461 479 aa12.87□□□□□ -0.35
PRAMEF35P-201ENST00000458709 C12orf76Q8N812 135 aaPredicted RBP12.87□□□□□ -0.35
PRAMEF35P-201ENST00000458709 FEZF2Q8TBJ5 459 aa12.87□□□□□ -0.35
PRAMEF35P-201ENST00000458709 PPP1R16BQ96T49 567 aa12.87□□□□□ -0.35
PRAMEF35P-201ENST00000458709 MTA3Q9BTC8 594 aa12.87□□□□□ -0.35
PRAMEF35P-201ENST00000458709 AZI2Q9H6S1 392 aa12.87□□□□□ -0.35
PRAMEF35P-201ENST00000458709 ATP6V0A4Q9HBG4 840 aa12.87□□□□□ -0.35
PRAMEF35P-201ENST00000458709 ANO2Q9NQ90 1003 aa12.87□□□□□ -0.35
PRAMEF35P-201ENST00000458709 RNF19AQ9NV58 838 aa12.87□□□□□ -0.35
PRAMEF35P-201ENST00000458709 TMEM161AQ9NX61 479 aa12.87□□□□□ -0.35
PRAMEF35P-201ENST00000458709 ST3GAL5Q9UNP4 418 aa12.87□□□□□ -0.35
PRAMEF35P-201ENST00000458709 RBM8AQ9Y5S9 174 aaKnown RBP12.87□□□□□ -0.35
PRAMEF35P-201ENST00000458709 DMXL1Q9Y485 3027 aa12.87□□□□□ -0.35
PRAMEF35P-201ENST00000458709 MYO10Q9HD67 2058 aa12.86□□□□□ -0.35
PRAMEF35P-201ENST00000458709 C2orf71A6NGG8 1288 aa12.86□□□□□ -0.35
PRAMEF35P-201ENST00000458709 NPR3P17342 541 aa12.86□□□□□ -0.35
PRAMEF35P-201ENST00000458709 AOC1P19801 751 aa12.86□□□□□ -0.35
PRAMEF35P-201ENST00000458709 MTHFRP42898 656 aa12.86□□□□□ -0.35
PRAMEF35P-201ENST00000458709 UBE2SQ16763 222 aa12.86□□□□□ -0.35
PRAMEF35P-201ENST00000458709 CCDC105Q8IYK2 499 aa12.86□□□□□ -0.35
PRAMEF35P-201ENST00000458709 ZDHHC14Q8IZN3 488 aa12.86□□□□□ -0.35
PRAMEF35P-201ENST00000458709 NME8Q8N427 588 aa12.86□□□□□ -0.35
PRAMEF35P-201ENST00000458709 CASD1Q96PB1 797 aa12.86□□□□□ -0.35
PRAMEF35P-201ENST00000458709 TMEM117Q9H0C3 514 aa12.86□□□□□ -0.35
PRAMEF35P-201ENST00000458709 SLC9A2Q9UBY0 812 aa12.86□□□□□ -0.35
PRAMEF35P-201ENST00000458709 CLASP2O75122 1294 aaKnown RBP12.85□□□□□ -0.35
PRAMEF35P-201ENST00000458709 SEC24BO95487 1268 aa12.85□□□□□ -0.35
PRAMEF35P-201ENST00000458709 KLRC1P26715 233 aa12.85□□□□□ -0.35
PRAMEF35P-201ENST00000458709 PPM1AP35813 382 aa12.85□□□□□ -0.35
PRAMEF35P-201ENST00000458709 STAT5BP51692 787 aa12.85□□□□□ -0.35
PRAMEF35P-201ENST00000458709 ACTR2P61160 394 aa12.85□□□□□ -0.35
PRAMEF35P-201ENST00000458709 SMC1AQ14683 1233 aaKnown RBP12.85□□□□□ -0.35
PRAMEF35P-201ENST00000458709 WTAPQ15007 396 aa12.85□□□□□ -0.35
PRAMEF35P-201ENST00000458709 RNF20Q5VTR2 975 aa12.85□□□□□ -0.35
PRAMEF35P-201ENST00000458709 CREB3L3Q68CJ9 461 aa12.85□□□□□ -0.35
PRAMEF35P-201ENST00000458709 KIAA1841Q6NSI8 718 aa12.85□□□□□ -0.35
PRAMEF35P-201ENST00000458709 PLPPR4Q7Z2D5 763 aa12.85□□□□□ -0.35
PRAMEF35P-201ENST00000458709 DGLUCYQ7Z3D6 616 aa12.85□□□□□ -0.35
PRAMEF35P-201ENST00000458709 FAM228AQ86W67 206 aa12.85□□□□□ -0.35
PRAMEF35P-201ENST00000458709 KIAA0319LQ8IZA0 1049 aa12.85□□□□□ -0.35
PRAMEF35P-201ENST00000458709 MRPL43Q8N983 215 aaKnown RBP12.85□□□□□ -0.35
PRAMEF35P-201ENST00000458709 RRP36Q96EU6 259 aaKnown RBP12.85□□□□□ -0.35
PRAMEF35P-201ENST00000458709 ZNF558Q96NG5 402 aa12.85□□□□□ -0.35
PRAMEF35P-201ENST00000458709 OSMRQ99650 979 aa12.85□□□□□ -0.35
PRAMEF35P-201ENST00000458709 MYL10Q9BUA6 226 aa12.85□□□□□ -0.35
PRAMEF35P-201ENST00000458709 SPZ1Q9BXG8 430 aa12.85□□□□□ -0.35
PRAMEF35P-201ENST00000458709 TM6SF1Q9BZW5 370 aa12.85□□□□□ -0.35
PRAMEF35P-201ENST00000458709 ELAC1Q9H777 363 aaKnown RBP12.85□□□□□ -0.35
PRAMEF35P-201ENST00000458709 JADE2Q9NQC1 790 aa12.85□□□□□ -0.35
PRAMEF35P-201ENST00000458709 DBR1Q9UK59 544 aaKnown RBP12.85□□□□□ -0.35
PRAMEF35P-201ENST00000458709 SLC27A2O14975 620 aa12.84□□□□□ -0.35
PRAMEF35P-201ENST00000458709 GPR182O15218 404 aa12.84□□□□□ -0.35
PRAMEF35P-201ENST00000458709 EOMESO95936 686 aa12.84□□□□□ -0.35
PRAMEF35P-201ENST00000458709 CA8P35219 290 aa12.84□□□□□ -0.35
PRAMEF35P-201ENST00000458709 FAM189BP81408 668 aa12.84□□□□□ -0.35
PRAMEF35P-201ENST00000458709 KRT17Q04695 432 aa12.84□□□□□ -0.35
PRAMEF35P-201ENST00000458709 KRT32Q14532 448 aa12.84□□□□□ -0.35
PRAMEF35P-201ENST00000458709 DSC3Q14574 896 aa12.84□□□□□ -0.35
PRAMEF35P-201ENST00000458709 KIZQ2M2Z5 673 aa12.84□□□□□ -0.35
PRAMEF35P-201ENST00000458709 KIAA2013Q8IYS2 634 aa12.84□□□□□ -0.35
PRAMEF35P-201ENST00000458709 LRRC43Q8N309 656 aa12.84□□□□□ -0.35
PRAMEF35P-201ENST00000458709 DTWD2Q8NBA8 298 aa12.84□□□□□ -0.35
PRAMEF35P-201ENST00000458709 KCNG4Q8TDN1 519 aa12.84□□□□□ -0.35
PRAMEF35P-201ENST00000458709 TNPO1Q92973 898 aaKnown RBP12.84□□□□□ -0.35
PRAMEF35P-201ENST00000458709 KCNH7Q9NS40 1196 aa12.84□□□□□ -0.35
PRAMEF35P-201ENST00000458709 SPG21Q9NZD8 308 aa12.84□□□□□ -0.35
PRAMEF35P-201ENST00000458709 SEC63Q9UGP8 760 aaKnown RBP12.84□□□□□ -0.35
PRAMEF35P-201ENST00000458709 CIZ1Q9ULV3 898 aaPredicted RBP12.84□□□□□ -0.35
PRAMEF35P-201ENST00000458709 TAF6LQ9Y6J9 622 aa12.84□□□□□ -0.35
PRAMEF35P-201ENST00000458709 DNAH14Q0VDD8 3507 aa12.84□□□□□ -0.35
PRAMEF35P-201ENST00000458709 ERICH2A1L162 156 aa12.83□□□□□ -0.36
PRAMEF35P-201ENST00000458709 KRT37O76014 449 aa12.83□□□□□ -0.36
PRAMEF35P-201ENST00000458709 TRDNQ13061 729 aa12.83□□□□□ -0.36
PRAMEF35P-201ENST00000458709 ODR4Q5SWX8 454 aa12.83□□□□□ -0.36
PRAMEF35P-201ENST00000458709 CATIPQ7Z7H3 387 aa12.83□□□□□ -0.36
PRAMEF35P-201ENST00000458709 SLC39A11Q8N1S5 342 aa12.83□□□□□ -0.36
PRAMEF35P-201ENST00000458709 CYP2W1Q8TAV3 490 aa12.83□□□□□ -0.36
PRAMEF35P-201ENST00000458709 PSTPIP2Q9H939 334 aa12.83□□□□□ -0.36
PRAMEF35P-201ENST00000458709 USTQ9Y2C2 406 aa12.83□□□□□ -0.36
PRAMEF35P-201ENST00000458709 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.82□□□□□ -0.36
PRAMEF35P-201ENST00000458709 SPDYE3A6NKU9 549 aa12.82□□□□□ -0.36
PRAMEF35P-201ENST00000458709 ZBTB42B2RXF5 422 aa12.82□□□□□ -0.36
PRAMEF35P-201ENST00000458709 NT5C1B-RDH14C9J2C7 533 aa12.82□□□□□ -0.36
PRAMEF35P-201ENST00000458709 MAFGO15525 162 aa12.82□□□□□ -0.36
PRAMEF35P-201ENST00000458709 PLEKHA8P1O95397 391 aa12.82□□□□□ -0.36
PRAMEF35P-201ENST00000458709 LMNAP02545 664 aaKnown RBP12.82□□□□□ -0.36
PRAMEF35P-201ENST00000458709 VTNP04004 478 aa12.82□□□□□ -0.36
PRAMEF35P-201ENST00000458709 EPCAMP16422 314 aa12.82□□□□□ -0.36
PRAMEF35P-201ENST00000458709 METAP2P50579 478 aaKnown RBP eCLIP12.82□□□□□ -0.36
PRAMEF35P-201ENST00000458709 ANTXR2P58335 489 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms