RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 FOXR2Q6PJQ5 311 aa9.92□□□□□ -0.82
VPS50-207ENST00000458530 B3GNT9Q6UX72 402 aa9.92□□□□□ -0.82
VPS50-207ENST00000458530 STXBP4Q6ZWJ1 553 aa9.92□□□□□ -0.82
VPS50-207ENST00000458530 FAM114A1Q8IWE2 563 aa9.92□□□□□ -0.82
VPS50-207ENST00000458530 TPH2Q8IWU9 490 aa9.92□□□□□ -0.82
VPS50-207ENST00000458530 DRC7Q8IY82 874 aa9.92□□□□□ -0.82
VPS50-207ENST00000458530 FAM133AQ8N9E0 248 aa9.92□□□□□ -0.82
VPS50-207ENST00000458530 NELFBQ8WX92 580 aa9.92□□□□□ -0.82
VPS50-207ENST00000458530 ATP6V0A1Q93050 837 aa9.92□□□□□ -0.82
VPS50-207ENST00000458530 DYDC2Q96IM9 177 aa9.92□□□□□ -0.82
VPS50-207ENST00000458530 TSG101Q99816 390 aa9.92□□□□□ -0.82
VPS50-207ENST00000458530 HSD17B14Q9BPX1 270 aa9.92□□□□□ -0.82
VPS50-207ENST00000458530 NUDT12Q9BQG2 462 aa9.92□□□□□ -0.82
VPS50-207ENST00000458530 LXNQ9BS40 222 aa9.92□□□□□ -0.82
VPS50-207ENST00000458530 TIPINQ9BVW5 301 aa9.92□□□□□ -0.82
VPS50-207ENST00000458530 ADAM33Q9BZ11 813 aa9.92□□□□□ -0.82
VPS50-207ENST00000458530 JPH1Q9HDC5 661 aaPredicted RBP9.92□□□□□ -0.82
VPS50-207ENST00000458530 PANK4Q9NVE7 773 aa9.92□□□□□ -0.82
VPS50-207ENST00000458530 SLC5A4Q9NY91 659 aa9.92□□□□□ -0.82
VPS50-207ENST00000458530 NFE2L3Q9Y4A8 694 aa9.92□□□□□ -0.82
VPS50-207ENST00000458530 ARHGEF35A5YM69 484 aa9.91□□□□□ -0.82
VPS50-207ENST00000458530 PPP1R3GB7ZBB8 358 aa9.91□□□□□ -0.82
VPS50-207ENST00000458530 E9PMD0 336 aa9.91□□□□□ -0.82
VPS50-207ENST00000458530 DDX39AO00148 427 aaKnown RBP9.91□□□□□ -0.82
VPS50-207ENST00000458530 SERPINC1P01008 464 aa9.91□□□□□ -0.82
VPS50-207ENST00000458530 PSAPP07602 524 aa9.91□□□□□ -0.82
VPS50-207ENST00000458530 TGFB3P10600 412 aa9.91□□□□□ -0.82
VPS50-207ENST00000458530 CYP11B2P19099 503 aa9.91□□□□□ -0.82
VPS50-207ENST00000458530 EDNRBP24530 442 aa9.91□□□□□ -0.82
VPS50-207ENST00000458530 MAPK4P31152 587 aa9.91□□□□□ -0.82
VPS50-207ENST00000458530 SLC12A3P55017 1021 aa9.91□□□□□ -0.82
VPS50-207ENST00000458530 PSMC5P62195 406 aa9.91□□□□□ -0.82
VPS50-207ENST00000458530 COASYQ13057 564 aa9.91□□□□□ -0.82
VPS50-207ENST00000458530 ITGB3BPQ13352 177 aaPredicted RBP9.91□□□□□ -0.82
VPS50-207ENST00000458530 NEDD9Q14511 834 aa9.91□□□□□ -0.82
VPS50-207ENST00000458530 NCAPHQ15003 741 aa9.91□□□□□ -0.82
VPS50-207ENST00000458530 FILIP1LQ4L180 1135 aa9.91□□□□□ -0.82
VPS50-207ENST00000458530 FAM26FQ5R3K3 315 aa9.91□□□□□ -0.82
VPS50-207ENST00000458530 MIS18BP1Q6P0N0 1132 aa9.91□□□□□ -0.82
VPS50-207ENST00000458530 DYMQ7RTS9 669 aa9.91□□□□□ -0.82
VPS50-207ENST00000458530 KCNK18Q7Z418 384 aa9.91□□□□□ -0.82
VPS50-207ENST00000458530 ADSSL1Q8N142 457 aa9.91□□□□□ -0.82
VPS50-207ENST00000458530 UIMC1Q96RL1 719 aa9.91□□□□□ -0.82
VPS50-207ENST00000458530 CDX2Q99626 313 aaPredicted RBP9.91□□□□□ -0.82
VPS50-207ENST00000458530 BHMT2Q9H2M3 363 aa9.91□□□□□ -0.82
VPS50-207ENST00000458530 TXNRD2Q9NNW7 524 aa9.91□□□□□ -0.82
VPS50-207ENST00000458530 PKD2L1Q9P0L9 805 aa9.91□□□□□ -0.82
VPS50-207ENST00000458530 MAGEC2Q9UBF1 373 aaPredicted RBP9.91□□□□□ -0.82
VPS50-207ENST00000458530 SEL1LQ9UBV2 794 aa9.91□□□□□ -0.82
VPS50-207ENST00000458530 SLC9A2Q9UBY0 812 aa9.91□□□□□ -0.82
VPS50-207ENST00000458530 DBR1Q9UK59 544 aaKnown RBP9.91□□□□□ -0.82
VPS50-207ENST00000458530 ODF2LQ9ULJ1 636 aa9.91□□□□□ -0.82
VPS50-207ENST00000458530 PCDHA10Q9Y5I2 948 aa9.91□□□□□ -0.82
VPS50-207ENST00000458530 COL4A3BPQ9Y5P4 624 aa9.91□□□□□ -0.82
VPS50-207ENST00000458530 UBE4BO95155 1302 aa9.9□□□□□ -0.82
VPS50-207ENST00000458530 DNAJC25-GNG10A0A024R161 153 aa9.9□□□□□ -0.82
VPS50-207ENST00000458530 SPATA31C2B4DYI2 1134 aa9.9□□□□□ -0.82
VPS50-207ENST00000458530 DHX15O43143 795 aaKnown RBP9.9□□□□□ -0.82
VPS50-207ENST00000458530 NRDCO43847 1150 aa9.9□□□□□ -0.82
VPS50-207ENST00000458530 SLITRK3O94933 977 aa9.9□□□□□ -0.82
VPS50-207ENST00000458530 IGHA2P01877 340 aa9.9□□□□□ -0.82
VPS50-207ENST00000458530 KCNA2P16389 499 aa9.9□□□□□ -0.82
VPS50-207ENST00000458530 CCNE1P24864 410 aa9.9□□□□□ -0.82
VPS50-207ENST00000458530 PRCPP42785 496 aa9.9□□□□□ -0.82
VPS50-207ENST00000458530 CNTN2Q02246 1040 aa9.9□□□□□ -0.82
VPS50-207ENST00000458530 LRRC63Q05C16 580 aa9.9□□□□□ -0.82
VPS50-207ENST00000458530 CACNB2Q08289 660 aaPredicted RBP9.9□□□□□ -0.82
VPS50-207ENST00000458530 CTTNQ14247 550 aaKnown RBP9.9□□□□□ -0.82
VPS50-207ENST00000458530 ECM1Q16610 540 aa9.9□□□□□ -0.82
VPS50-207ENST00000458530 OTUD6AQ7L8S5 288 aa9.9□□□□□ -0.82
VPS50-207ENST00000458530 C4orf19Q8IY42 314 aa9.9□□□□□ -0.82
VPS50-207ENST00000458530 TRMT44Q8IYL2 757 aaKnown RBP9.9□□□□□ -0.82
VPS50-207ENST00000458530 GUF1Q8N442 669 aaKnown RBP9.9□□□□□ -0.82
VPS50-207ENST00000458530 MAFAQ8NHW3 353 aaPredicted RBP9.9□□□□□ -0.82
VPS50-207ENST00000458530 LRRC15Q8TF66 581 aa9.9□□□□□ -0.82
VPS50-207ENST00000458530 P2RX5Q93086 422 aa9.9□□□□□ -0.82
VPS50-207ENST00000458530 SEMA6BQ9H3T3 888 aa9.9□□□□□ -0.82
VPS50-207ENST00000458530 RGL1Q9NZL6 768 aa9.9□□□□□ -0.82
VPS50-207ENST00000458530 GDAQ9Y2T3 454 aa9.9□□□□□ -0.82
VPS50-207ENST00000458530 LTBP2Q14767 1821 aa9.9□□□□□ -0.82
VPS50-207ENST00000458530 BDP1A6H8Y1 2624 aa9.9□□□□□ -0.82
VPS50-207ENST00000458530 DNAH12Q6ZR08 3092 aa9.9□□□□□ -0.83
VPS50-207ENST00000458530 FRMD3A2A2Y4 597 aa9.89□□□□□ -0.83
VPS50-207ENST00000458530 FAM13AO94988 1023 aa9.89□□□□□ -0.83
VPS50-207ENST00000458530 GUCY2CP25092 1073 aa9.89□□□□□ -0.83
VPS50-207ENST00000458530 UBASH3AP57075 661 aa9.89□□□□□ -0.83
VPS50-207ENST00000458530 GSDMDP57764 484 aa9.89□□□□□ -0.83
VPS50-207ENST00000458530 FANCCQ00597 558 aa9.89□□□□□ -0.83
VPS50-207ENST00000458530 EHHADHQ08426 723 aa9.89□□□□□ -0.83
VPS50-207ENST00000458530 ALCAMQ13740 583 aa9.89□□□□□ -0.83
VPS50-207ENST00000458530 HERC4Q5GLZ8 1057 aaPredicted RBP9.89□□□□□ -0.83
VPS50-207ENST00000458530 MORN1Q5T089 497 aa9.89□□□□□ -0.83
VPS50-207ENST00000458530 ZNF697Q5TEC3 545 aa9.89□□□□□ -0.83
VPS50-207ENST00000458530 FAM160B1Q5W0V3 765 aa9.89□□□□□ -0.83
VPS50-207ENST00000458530 SMYD4Q8IYR2 804 aaPredicted RBP9.89□□□□□ -0.83
VPS50-207ENST00000458530 MYOCDQ8IZQ8 938 aa9.89□□□□□ -0.83
VPS50-207ENST00000458530 BANK1Q8NDB2 785 aa9.89□□□□□ -0.83
VPS50-207ENST00000458530 SOCS4Q8WXH5 440 aa9.89□□□□□ -0.83
VPS50-207ENST00000458530 ZDHHC16Q969W1 377 aa9.89□□□□□ -0.83
VPS50-207ENST00000458530 DNAJC19Q96DA6 116 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms