RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 DKC1O60832 514 aaKnown RBP eCLIP20.94■□□□□ 0.94
USP39-209ENST00000458268 RPS6KA5O75582 802 aa20.94■□□□□ 0.94
USP39-209ENST00000458268 ARHGEF15O94989 841 aa20.94■□□□□ 0.94
USP39-209ENST00000458268 GJB5O95377 273 aa20.94■□□□□ 0.94
USP39-209ENST00000458268 NPEPPSP55786 919 aa20.94■□□□□ 0.94
USP39-209ENST00000458268 NLRP11P59045 1033 aaKnown RBP20.94■□□□□ 0.94
USP39-209ENST00000458268 PPM1EQ8WY54 764 aa20.94■□□□□ 0.94
USP39-209ENST00000458268 ARNTL2Q8WYA1 636 aa20.94■□□□□ 0.94
USP39-209ENST00000458268 CCDC43Q96MW1 224 aaKnown RBP20.94■□□□□ 0.94
USP39-209ENST00000458268 EIF2AK1Q9BQI3 630 aaKnown RBP20.94■□□□□ 0.94
USP39-209ENST00000458268 WRAP73Q9P2S5 460 aaPredicted RBP20.94■□□□□ 0.94
USP39-209ENST00000458268 PADI3Q9ULW8 664 aa20.94■□□□□ 0.94
USP39-209ENST00000458268 STXBP5LQ9Y2K9 1186 aa20.94■□□□□ 0.94
USP39-209ENST00000458268 NOC2LQ9Y3T9 749 aaKnown RBP20.94■□□□□ 0.94
USP39-209ENST00000458268 OR52Z1P0C646 297 aa20.93■□□□□ 0.94
USP39-209ENST00000458268 SPIRE1Q08AE8 756 aa20.93■□□□□ 0.94
USP39-209ENST00000458268 ANO5Q75V66 913 aa20.93■□□□□ 0.94
USP39-209ENST00000458268 SPRED2Q7Z698 418 aa20.93■□□□□ 0.94
USP39-209ENST00000458268 MICALL1Q8N3F8 863 aa20.93■□□□□ 0.94
USP39-209ENST00000458268 IL27Q8NEV9 243 aa20.93■□□□□ 0.94
USP39-209ENST00000458268 NLRP7Q8WX94 980 aa20.93■□□□□ 0.94
USP39-209ENST00000458268 CEP170P1Q96L14 293 aa20.93■□□□□ 0.94
USP39-209ENST00000458268 YME1L1Q96TA2 773 aa20.93■□□□□ 0.94
USP39-209ENST00000458268 RFXAPO00287 272 aa20.92■□□□□ 0.94
USP39-209ENST00000458268 TECP42680 631 aa20.92■□□□□ 0.94
USP39-209ENST00000458268 POLGP54098 1239 aaPredicted RBP20.92■□□□□ 0.94
USP39-209ENST00000458268 DRP2Q13474 957 aa20.92■□□□□ 0.94
USP39-209ENST00000458268 XKR9Q5GH70 373 aa20.92■□□□□ 0.94
USP39-209ENST00000458268 LARP1BQ659C4 914 aaKnown RBP20.92■□□□□ 0.94
USP39-209ENST00000458268 TMEM40Q8WWA1 233 aa20.92■□□□□ 0.94
USP39-209ENST00000458268 RAD9AQ99638 391 aa20.92■□□□□ 0.94
USP39-209ENST00000458268 A0A087WWV3 80 aa20.91■□□□□ 0.94
USP39-209ENST00000458268 ZBTB39O15060 712 aa20.91■□□□□ 0.94
USP39-209ENST00000458268 STBD1O95210 358 aa20.91■□□□□ 0.94
USP39-209ENST00000458268 YWHABP31946 246 aaKnown RBP20.91■□□□□ 0.94
USP39-209ENST00000458268 DNM2P50570 870 aa20.91■□□□□ 0.94
USP39-209ENST00000458268 TAP1Q03518 808 aa20.91■□□□□ 0.94
USP39-209ENST00000458268 ZNF579Q8NAF0 562 aaKnown RBP20.91■□□□□ 0.94
USP39-209ENST00000458268 USP38Q8NB14 1042 aa20.91■□□□□ 0.94
USP39-209ENST00000458268 MTMR9Q96QG7 549 aa20.91■□□□□ 0.94
USP39-209ENST00000458268 NIFKQ9BYG3 293 aaKnown RBP20.91■□□□□ 0.94
USP39-209ENST00000458268 ZSWIM4Q9H7M6 989 aa20.91■□□□□ 0.94
USP39-209ENST00000458268 CYP26B1Q9NR63 512 aa20.91■□□□□ 0.94
USP39-209ENST00000458268 KDM3AQ9Y4C1 1321 aa20.9■□□□□ 0.94
USP39-209ENST00000458268 DENND3A2RUS2 1198 aa20.9■□□□□ 0.94
USP39-209ENST00000458268 VPS37CA5D8V6 355 aaPredicted RBP20.9■□□□□ 0.94
USP39-209ENST00000458268 ENPP3O14638 875 aa20.9■□□□□ 0.94
USP39-209ENST00000458268 FGFR4P22455 802 aa20.9■□□□□ 0.94
USP39-209ENST00000458268 U2AF2P26368 475 aaKnown RBP eCLIP20.9■□□□□ 0.94
USP39-209ENST00000458268 CRYBB1P53674 252 aaPredicted RBP20.9■□□□□ 0.94
USP39-209ENST00000458268 TARBP2Q15633 366 aaKnown RBP20.9■□□□□ 0.94
USP39-209ENST00000458268 OTUD6AQ7L8S5 288 aa20.9■□□□□ 0.94
USP39-209ENST00000458268 RHPN2Q8IUC4 686 aa20.9■□□□□ 0.94
USP39-209ENST00000458268 MAFAQ8NHW3 353 aaPredicted RBP20.9■□□□□ 0.94
USP39-209ENST00000458268 LINC01599Q8WXQ3 324 aa20.9■□□□□ 0.94
USP39-209ENST00000458268 NLRP4Q96MN2 994 aa20.9■□□□□ 0.94
USP39-209ENST00000458268 ST3GAL5Q9UNP4 418 aa20.9■□□□□ 0.94
USP39-209ENST00000458268 PCDHB6Q9Y5E3 794 aa20.9■□□□□ 0.94
USP39-209ENST00000458268 GPR32O75388 356 aa20.89■□□□□ 0.93
USP39-209ENST00000458268 CSDE1O75534 798 aaKnown RBP20.89■□□□□ 0.93
USP39-209ENST00000458268 FAM228AQ86W67 206 aa20.89■□□□□ 0.93
USP39-209ENST00000458268 C4orf19Q8IY42 314 aa20.89■□□□□ 0.93
USP39-209ENST00000458268 LINC01465Q8N7H1 131 aa20.89■□□□□ 0.93
USP39-209ENST00000458268 SLC7A3Q8WY07 619 aa20.89■□□□□ 0.93
USP39-209ENST00000458268 TOP1MTQ969P6 601 aa20.89■□□□□ 0.93
USP39-209ENST00000458268 ERVK-5Q9HDB9 667 aa20.89■□□□□ 0.93
USP39-209ENST00000458268 SUCLA2Q9P2R7 463 aaPredicted RBP20.89■□□□□ 0.93
USP39-209ENST00000458268 LRFN2Q9ULH4 789 aa20.89■□□□□ 0.93
USP39-209ENST00000458268 INSL6Q9Y581 213 aa20.89■□□□□ 0.93
USP39-209ENST00000458268 SQORQ9Y6N5 450 aa20.89■□□□□ 0.93
USP39-209ENST00000458268 COL4A4P53420 1690 aaPredicted RBP20.89■□□□□ 0.93
USP39-209ENST00000458268 NLRC5Q86WI3 1866 aa20.88■□□□□ 0.93
USP39-209ENST00000458268 LINC01553A4QN01 128 aa20.88■□□□□ 0.93
USP39-209ENST00000458268 SLITRK3O94933 977 aa20.88■□□□□ 0.93
USP39-209ENST00000458268 TRAPPC10P48553 1259 aa20.88■□□□□ 0.93
USP39-209ENST00000458268 GPC3P51654 580 aa20.88■□□□□ 0.93
USP39-209ENST00000458268 MKRN4PQ13434 485 aaPredicted RBP20.88■□□□□ 0.93
USP39-209ENST00000458268 CCDC85BQ15834 202 aaPredicted RBP20.88■□□□□ 0.93
USP39-209ENST00000458268 ODR4Q5SWX8 454 aa20.88■□□□□ 0.93
USP39-209ENST00000458268 KSR1Q8IVT5 923 aa20.88■□□□□ 0.93
USP39-209ENST00000458268 PIGOQ8TEQ8 1089 aa20.88■□□□□ 0.93
USP39-209ENST00000458268 TMEM143Q96AN5 459 aa20.88■□□□□ 0.93
USP39-209ENST00000458268 FTHL17Q9BXU8 183 aa20.88■□□□□ 0.93
USP39-209ENST00000458268 TMX1Q9H3N1 280 aa20.88■□□□□ 0.93
USP39-209ENST00000458268 EPOPA6NHQ4 379 aa20.87■□□□□ 0.93
USP39-209ENST00000458268 GPR182O15218 404 aa20.87■□□□□ 0.93
USP39-209ENST00000458268 MAFO75444 373 aaPredicted RBP20.87■□□□□ 0.93
USP39-209ENST00000458268 TOB1P50616 345 aaPredicted RBP20.87■□□□□ 0.93
USP39-209ENST00000458268 ORC2Q13416 577 aaPredicted RBP20.87■□□□□ 0.93
USP39-209ENST00000458268 EMC2Q15006 297 aa20.87■□□□□ 0.93
USP39-209ENST00000458268 PAN2Q504Q3 1202 aaKnown RBP20.87■□□□□ 0.93
USP39-209ENST00000458268 RTN4RL1Q86UN2 441 aaPredicted RBP20.87■□□□□ 0.93
USP39-209ENST00000458268 FERMT3Q86UX7 667 aa20.87■□□□□ 0.93
USP39-209ENST00000458268 ERMNQ8TAM6 284 aa20.87■□□□□ 0.93
USP39-209ENST00000458268 NEK9Q8TD19 979 aa20.87■□□□□ 0.93
USP39-209ENST00000458268 GDPD5Q8WTR4 605 aa20.87■□□□□ 0.93
USP39-209ENST00000458268 ADAM2Q99965 735 aa20.87■□□□□ 0.93
USP39-209ENST00000458268 JPH2Q9BR39 696 aaPredicted RBP20.87■□□□□ 0.93
USP39-209ENST00000458268 A0A087WZ62 844 aa20.86■□□□□ 0.93
USP39-209ENST00000458268 MGEA5O60502 916 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms