RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 KIZQ2M2Z5 673 aa24.39■■□□□ 1.49
CPNE1-220ENST00000458038 METTL13Q8N6R0 699 aa24.39■■□□□ 1.49
CPNE1-220ENST00000458038 SMRP1Q8NCR6 262 aa24.39■■□□□ 1.49
CPNE1-220ENST00000458038 TMEM40Q8WWA1 233 aa24.39■■□□□ 1.49
CPNE1-220ENST00000458038 ATP6V0A4Q9HBG4 840 aa24.39■■□□□ 1.49
CPNE1-220ENST00000458038 NID2Q14112 1375 aa24.39■■□□□ 1.49
CPNE1-220ENST00000458038 HOXA2O43364 376 aa24.38■■□□□ 1.49
CPNE1-220ENST00000458038 GPR32O75388 356 aa24.38■■□□□ 1.49
CPNE1-220ENST00000458038 CSPG5O95196 566 aa24.38■■□□□ 1.49
CPNE1-220ENST00000458038 TMOD1P28289 359 aa24.38■■□□□ 1.49
CPNE1-220ENST00000458038 NRIP1P48552 1158 aa24.38■■□□□ 1.49
CPNE1-220ENST00000458038 GATMP50440 423 aa24.38■■□□□ 1.49
CPNE1-220ENST00000458038 APOBRQ0VD83 1088 aa24.38■■□□□ 1.49
CPNE1-220ENST00000458038 Q6ZUG5 572 aa24.38■■□□□ 1.49
CPNE1-220ENST00000458038 MICAL1Q8TDZ2 1067 aa24.38■■□□□ 1.49
CPNE1-220ENST00000458038 CDCA3Q99618 268 aaPredicted RBP24.38■■□□□ 1.49
CPNE1-220ENST00000458038 TLE6Q9H808 572 aa24.38■■□□□ 1.49
CPNE1-220ENST00000458038 CLEC1BQ9P126 229 aa24.38■■□□□ 1.49
CPNE1-220ENST00000458038 PKN1Q16512 942 aa24.37■■□□□ 1.49
CPNE1-220ENST00000458038 PRR16Q569H4 304 aa24.37■■□□□ 1.49
CPNE1-220ENST00000458038 BLOC1S2Q6QNY1 142 aa24.37■■□□□ 1.49
CPNE1-220ENST00000458038 ADGRD2Q7Z7M1 963 aa24.37■■□□□ 1.49
CPNE1-220ENST00000458038 RNF135Q8IUD6 432 aa24.37■■□□□ 1.49
CPNE1-220ENST00000458038 CCDC148Q8NFR7 591 aa24.37■■□□□ 1.49
CPNE1-220ENST00000458038 BRF1Q92994 677 aa24.37■■□□□ 1.49
CPNE1-220ENST00000458038 MAP7D2Q96T17 732 aa24.37■■□□□ 1.49
CPNE1-220ENST00000458038 OSMRQ99650 979 aa24.37■■□□□ 1.49
CPNE1-220ENST00000458038 TLR9Q9NR96 1032 aa24.37■■□□□ 1.49
CPNE1-220ENST00000458038 NRBP2Q9NSY0 501 aa24.37■■□□□ 1.49
CPNE1-220ENST00000458038 LZTS1Q9Y250 596 aa24.37■■□□□ 1.49
CPNE1-220ENST00000458038 SAMM50Q9Y512 469 aa24.37■■□□□ 1.49
CPNE1-220ENST00000458038 ZNF318Q5VUA4 2279 aa24.36■■□□□ 1.49
CPNE1-220ENST00000458038 WDR64B1ANS9 1081 aa24.36■■□□□ 1.49
CPNE1-220ENST00000458038 PPFIA3O75145 1194 aa24.36■■□□□ 1.49
CPNE1-220ENST00000458038 FGF18O76093 207 aa24.36■■□□□ 1.49
CPNE1-220ENST00000458038 LAG3P18627 525 aa24.36■■□□□ 1.49
CPNE1-220ENST00000458038 FAM102BQ5T8I3 360 aa24.36■■□□□ 1.49
CPNE1-220ENST00000458038 FAM228AQ86W67 206 aa24.36■■□□□ 1.49
CPNE1-220ENST00000458038 MFSD14AQ96MC6 490 aa24.36■■□□□ 1.49
CPNE1-220ENST00000458038 JAKMIP1Q96N16 626 aaKnown RBP24.36■■□□□ 1.49
CPNE1-220ENST00000458038 RNF26Q9BY78 433 aaPredicted RBP24.36■■□□□ 1.49
CPNE1-220ENST00000458038 TYW1Q9NV66 732 aaKnown RBP24.36■■□□□ 1.49
CPNE1-220ENST00000458038 GABBR1Q9UBS5 961 aa24.36■■□□□ 1.49
CPNE1-220ENST00000458038 WDFY4Q6ZS81 3184 aa24.35■■□□□ 1.49
CPNE1-220ENST00000458038 VTNP04004 478 aa24.35■■□□□ 1.49
CPNE1-220ENST00000458038 IBSPP21815 317 aaPredicted RBP24.35■■□□□ 1.49
CPNE1-220ENST00000458038 USP11P51784 963 aa24.35■■□□□ 1.49
CPNE1-220ENST00000458038 DSC3Q14574 896 aa24.35■■□□□ 1.49
CPNE1-220ENST00000458038 THNSL1Q8IYQ7 743 aa24.35■■□□□ 1.49
CPNE1-220ENST00000458038 COLGALT1Q8NBJ5 622 aa24.35■■□□□ 1.49
CPNE1-220ENST00000458038 RIT2Q99578 217 aa24.35■■□□□ 1.49
CPNE1-220ENST00000458038 AGXT2Q9BYV1 514 aa24.35■■□□□ 1.49
CPNE1-220ENST00000458038 PUF60Q9UHX1 559 aaKnown RBP24.35■■□□□ 1.49
CPNE1-220ENST00000458038 ZSCAN20P17040 1043 aaPredicted RBP24.34■■□□□ 1.49
CPNE1-220ENST00000458038 EIF4BP23588 611 aaKnown RBP24.34■■□□□ 1.49
CPNE1-220ENST00000458038 PSMA5P28066 241 aa24.34■■□□□ 1.49
CPNE1-220ENST00000458038 HSPA4P34932 840 aa24.34■■□□□ 1.49
CPNE1-220ENST00000458038 EFCAB12Q6NXP0 572 aa24.34■■□□□ 1.49
CPNE1-220ENST00000458038 RBM23Q86U06 439 aaKnown RBP24.34■■□□□ 1.49
CPNE1-220ENST00000458038 TMEM117Q9H0C3 514 aa24.34■■□□□ 1.49
CPNE1-220ENST00000458038 SH3GLB2Q9NR46 395 aa24.34■■□□□ 1.49
CPNE1-220ENST00000458038 MUTYHQ9UIF7 546 aa24.34■■□□□ 1.49
CPNE1-220ENST00000458038 AKT3Q9Y243 479 aa24.34■■□□□ 1.49
CPNE1-220ENST00000458038 TECTAO75443 2155 aa24.33■■□□□ 1.49
CPNE1-220ENST00000458038 GLP2RO95838 553 aa24.33■■□□□ 1.49
CPNE1-220ENST00000458038 SRGAP2BP0DMP2 458 aa24.33■■□□□ 1.49
CPNE1-220ENST00000458038 IFNAR1P17181 557 aa24.33■■□□□ 1.49
CPNE1-220ENST00000458038 SFNP31947 248 aa24.33■■□□□ 1.49
CPNE1-220ENST00000458038 NLRP11P59045 1033 aaKnown RBP24.33■■□□□ 1.49
CPNE1-220ENST00000458038 CDC42EP1Q00587 391 aa24.33■■□□□ 1.49
CPNE1-220ENST00000458038 EDAQ92838 391 aa24.33■■□□□ 1.49
CPNE1-220ENST00000458038 LENG9Q96B70 501 aa24.33■■□□□ 1.49
CPNE1-220ENST00000458038 C22orf23Q9BZE7 217 aa24.33■■□□□ 1.49
CPNE1-220ENST00000458038 CWH43Q9H720 699 aa24.33■■□□□ 1.49
CPNE1-220ENST00000458038 DISC1Q9NRI5 854 aa24.33■■□□□ 1.49
CPNE1-220ENST00000458038 SNX14Q9Y5W7 946 aa24.33■■□□□ 1.49
CPNE1-220ENST00000458038 CPA1P15085 419 aa24.32■■□□□ 1.48
CPNE1-220ENST00000458038 ATF7P17544 494 aaPredicted RBP24.32■■□□□ 1.48
CPNE1-220ENST00000458038 PPM1AP35813 382 aa24.32■■□□□ 1.48
CPNE1-220ENST00000458038 PLCB3Q01970 1234 aa24.32■■□□□ 1.48
CPNE1-220ENST00000458038 CBX2Q14781 532 aaPredicted RBP24.32■■□□□ 1.48
CPNE1-220ENST00000458038 NTRK3Q16288 839 aa24.32■■□□□ 1.48
CPNE1-220ENST00000458038 DUSP6Q16828 381 aa24.32■■□□□ 1.48
CPNE1-220ENST00000458038 TRMT1LQ7Z2T5 733 aaKnown RBP24.32■■□□□ 1.48
CPNE1-220ENST00000458038 LINC01465Q8N7H1 131 aa24.32■■□□□ 1.48
CPNE1-220ENST00000458038 PPP1R16BQ96T49 567 aa24.32■■□□□ 1.48
CPNE1-220ENST00000458038 PHF7Q9BWX1 381 aaPredicted RBP24.32■■□□□ 1.48
CPNE1-220ENST00000458038 ADAMTS10Q9H324 1103 aa24.32■■□□□ 1.48
CPNE1-220ENST00000458038 LOC730098B7Z3J9 87 aa24.31■■□□□ 1.48
CPNE1-220ENST00000458038 ADAMTS3O15072 1205 aa24.31■■□□□ 1.48
CPNE1-220ENST00000458038 OATP04181 439 aa24.31■■□□□ 1.48
CPNE1-220ENST00000458038 RPS6KB1P23443 525 aa24.31■■□□□ 1.48
CPNE1-220ENST00000458038 CLCN3P51790 818 aa24.31■■□□□ 1.48
CPNE1-220ENST00000458038 JAK3P52333 1124 aa24.31■■□□□ 1.48
CPNE1-220ENST00000458038 EVCP57679 992 aa24.31■■□□□ 1.48
CPNE1-220ENST00000458038 TMEM184AQ6ZMB5 413 aa24.31■■□□□ 1.48
CPNE1-220ENST00000458038 HFE2Q6ZVN8 426 aa24.31■■□□□ 1.48
CPNE1-220ENST00000458038 BMP8AQ7Z5Y6 402 aa24.31■■□□□ 1.48
CPNE1-220ENST00000458038 ABI1Q8IZP0 508 aa24.31■■□□□ 1.48
CPNE1-220ENST00000458038 RDM1Q8NG50 284 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms