RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 SOX11P35716 441 aa21.05■□□□□ 0.96
SNX27-204ENST00000458013 RWDD2BP57060 319 aa21.05■□□□□ 0.96
SNX27-204ENST00000458013 DAB2P98082 770 aa21.05■□□□□ 0.96
SNX27-204ENST00000458013 HPS4Q9NQG7 708 aa21.05■□□□□ 0.96
SNX27-204ENST00000458013 THEGQ9P2T0 379 aa21.05■□□□□ 0.96
SNX27-204ENST00000458013 SLC13A4Q9UKG4 626 aa21.05■□□□□ 0.96
SNX27-204ENST00000458013 PCDHA6Q9UN73 950 aa21.05■□□□□ 0.96
SNX27-204ENST00000458013 PCDHA8Q9Y5H6 950 aa21.05■□□□□ 0.96
SNX27-204ENST00000458013 MAPK13O15264 365 aa21.05■□□□□ 0.96
SNX27-204ENST00000458013 SUSD4Q5VX71 490 aa21.05■□□□□ 0.96
SNX27-204ENST00000458013 COPEO14579 308 aa21.05■□□□□ 0.96
SNX27-204ENST00000458013 TBC1D10CQ8IV04 446 aa21.05■□□□□ 0.96
SNX27-204ENST00000458013 FSD1LQ9BXM9 530 aa21.05■□□□□ 0.96
SNX27-204ENST00000458013 MXD4Q14582 209 aaPredicted RBP21.04■□□□□ 0.96
SNX27-204ENST00000458013 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.04■□□□□ 0.96
SNX27-204ENST00000458013 LEMD3Q9Y2U8 911 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 ADORA2BP29275 332 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 TMEM270Q6UE05 265 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 SYT2Q8N9I0 419 aaPredicted RBP21.04■□□□□ 0.96
SNX27-204ENST00000458013 RFWD2Q8NHY2 731 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 IFT43Q96FT9 208 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 CYP4F11Q9HBI6 524 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 COPRSQ9NQ92 184 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 ATP7AQ04656 1500 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 PNMA6FA0A0J9YX94 578 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 PP2D1A8MPX8 630 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 RASA4BC9J798 803 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 RASA4O43374 803 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 CCNE1P24864 410 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 HNRNPH2P55795 449 aaKnown RBP21.04■□□□□ 0.96
SNX27-204ENST00000458013 ZBED6P86452 979 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 SYNE4Q8N205 404 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 CCDC90BQ9GZT6 254 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 KANSL2Q9H9L4 492 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 SPATS2LQ9NUQ6 558 aaKnown RBP21.04■□□□□ 0.96
SNX27-204ENST00000458013 KIF21AQ7Z4S6 1674 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 USP17L15C9J2P7 530 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 USP17L13C9JLJ4 530 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 USP17L11C9JVI0 530 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 USP17L18D6R9N7 530 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 USP17L22D6RA61 530 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 USP17L17D6RBQ6 530 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 USP17L19D6RCP7 530 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 USP17L20D6RJB6 530 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 DNAJC6O75061 913 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 E2F6O75461 281 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 USP17L24Q0WX57 530 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 USP17L6PQ6QN14 398 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 EPM2AIP1Q7L775 607 aaPredicted RBP21.04■□□□□ 0.96
SNX27-204ENST00000458013 AFG1LQ8WV93 481 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 STRIP2Q9ULQ0 834 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 K7ERI5 159 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 SNX2O60749 519 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 ACTN3Q08043 901 aaPredicted RBP21.04■□□□□ 0.96
SNX27-204ENST00000458013 HSP90AA5PQ58FG0 334 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 NUDCD3Q8IVD9 361 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 DRC3Q9H069 523 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 ZFP69BQ9UJL9 534 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 FBXL5Q9UKA1 691 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 GH2P01242 217 aa21.04■□□□□ 0.96
SNX27-204ENST00000458013 SRRM1Q8IYB3 904 aaKnown RBP21.04■□□□□ 0.96
SNX27-204ENST00000458013 ADD3Q9UEY8 706 aaKnown RBP21.04■□□□□ 0.96
SNX27-204ENST00000458013 ATP8B3O60423 1300 aa21.03■□□□□ 0.96
SNX27-204ENST00000458013 E2F8A0AVK6 867 aa21.03■□□□□ 0.96
SNX27-204ENST00000458013 MYL1P05976 194 aa21.03■□□□□ 0.96
SNX27-204ENST00000458013 MCAMP43121 646 aa21.03■□□□□ 0.96
SNX27-204ENST00000458013 ALKBH5Q6P6C2 394 aaKnown RBP21.03■□□□□ 0.96
SNX27-204ENST00000458013 SAAL1Q96ER3 474 aa21.03■□□□□ 0.96
SNX27-204ENST00000458013 EFHD1Q9BUP0 239 aa21.03■□□□□ 0.96
SNX27-204ENST00000458013 CNOT8Q9UFF9 292 aaKnown RBP21.03■□□□□ 0.96
SNX27-204ENST00000458013 CCNA1P78396 465 aa21.03■□□□□ 0.96
SNX27-204ENST00000458013 STAP2Q9UGK3 403 aa21.03■□□□□ 0.96
SNX27-204ENST00000458013 BLVRAP53004 296 aa21.03■□□□□ 0.96
SNX27-204ENST00000458013 MAGOHP61326 146 aaKnown RBP21.03■□□□□ 0.96
SNX27-204ENST00000458013 RESP18Q5W5W9 173 aa21.03■□□□□ 0.96
SNX27-204ENST00000458013 CYFIP1Q7L576 1253 aa21.03■□□□□ 0.96
SNX27-204ENST00000458013 TTC1Q99614 292 aa21.03■□□□□ 0.96
SNX27-204ENST00000458013 NUP85Q9BW27 656 aa21.03■□□□□ 0.96
SNX27-204ENST00000458013 GYG2O15488 501 aa21.03■□□□□ 0.96
SNX27-204ENST00000458013 MOCS2O96007 188 aaPredicted RBP21.03■□□□□ 0.96
SNX27-204ENST00000458013 CNOT10Q9H9A5 744 aaKnown RBP21.03■□□□□ 0.96
SNX27-204ENST00000458013 VCPP55072 806 aaKnown RBP21.02■□□□□ 0.96
SNX27-204ENST00000458013 NAA30Q147X3 362 aaPredicted RBP21.02■□□□□ 0.96
SNX27-204ENST00000458013 NLRP10Q86W26 655 aa21.02■□□□□ 0.96
SNX27-204ENST00000458013 CCNYL1Q8N7R7 359 aa21.02■□□□□ 0.96
SNX27-204ENST00000458013 SLC44A5Q8NCS7 719 aa21.02■□□□□ 0.96
SNX27-204ENST00000458013 SLC17A8Q8NDX2 589 aa21.02■□□□□ 0.96
SNX27-204ENST00000458013 TRPC5Q9UL62 973 aaPredicted RBP21.02■□□□□ 0.96
SNX27-204ENST00000458013 C21orf2O43822 256 aa21.02■□□□□ 0.96
SNX27-204ENST00000458013 PRCPP42785 496 aa21.02■□□□□ 0.96
SNX27-204ENST00000458013 LBRQ14739 615 aaKnown RBP21.02■□□□□ 0.96
SNX27-204ENST00000458013 HLFQ16534 295 aa21.02■□□□□ 0.96
SNX27-204ENST00000458013 PRKAG2Q9UGJ0 569 aa21.02■□□□□ 0.96
SNX27-204ENST00000458013 L3MBTL1Q9Y468 752 aa21.02■□□□□ 0.96
SNX27-204ENST00000458013 CCDC85BQ15834 202 aaPredicted RBP21.02■□□□□ 0.96
SNX27-204ENST00000458013 ARL13BQ3SXY8 428 aa21.02■□□□□ 0.96
SNX27-204ENST00000458013 C6orf118Q5T5N4 469 aa21.02■□□□□ 0.96
SNX27-204ENST00000458013 RHPN2Q8IUC4 686 aa21.02■□□□□ 0.96
SNX27-204ENST00000458013 ZNF710Q8N1W2 664 aa21.02■□□□□ 0.96
SNX27-204ENST00000458013 OTULINQ96BN8 352 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms