RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 NPHP3-ACAD11A0A0J9YXS1 232 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 POTEFA5A3E0 1075 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 ARHGEF35A5YM69 484 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 ANKRD62A6NC57 917 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 ANKRD65E5RJM6 399 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 F8VZ95 297 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 PODXLO00592 558 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 NDC80O14777 642 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 CHUKO15111 745 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 P4HA2O15460 535 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 RGS16O15492 202 aaPredicted RBP3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 GAS7O60861 476 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 PHF2O75151 1096 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 PPFIA2O75334 1257 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 MED24O75448 989 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 AGTP01019 485 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 FGGP02679 453 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 PAEPP09466 180 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 FAM153BP0C7A2 387 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 POTEIP0CG38 1075 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 GHRP10912 638 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 ACTN1P12814 892 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 EZRP15311 586 aaKnown RBP3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 SLC9A1P19634 815 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 PON1P27169 355 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 HNRNPH1P31943 449 aaKnown RBP3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 NF2P35240 595 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 SLC16A2P36021 539 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 MAP2K2P36507 400 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 SREBF1P36956 1147 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 SMTNP53814 917 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 PMS2P54278 862 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 JAM2P57087 298 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 PTENP60484 403 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 GTF2IP78347 998 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 MRPS25P82663 173 aaKnown RBP3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 CACNB1Q02641 598 aaPredicted RBP3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 ICA1Q05084 483 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 ACTN3Q08043 901 aaPredicted RBP3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 ZNF844Q08AG5 666 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 IFT88Q13099 833 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 CALCOCO2Q13137 446 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 ITGB3BPQ13352 177 aaPredicted RBP3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 BYSLQ13895 437 aaKnown RBP3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 GIT2Q14161 759 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 MYBPC2Q14324 1141 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 NEDD9Q14511 834 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 NFIXQ14938 502 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 VPS72Q15906 364 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 SNCBQ16143 134 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 SLC15A2Q16348 729 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 ECM1Q16610 540 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 NBPF9Q3BBW0 867 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 FAM153CQ494X1 144 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 CERKLQ49MI3 558 aaPredicted RBP3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 C6orf118Q5T5N4 469 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 SYDE2Q5VT97 1194 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 PRR5LQ6MZQ0 368 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 C11orf63Q6NUN7 778 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 POTEGQ6S5H5 508 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 POTEEQ6S8J3 1075 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 TMEM179Q6ZVK1 233 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 KCTD1Q719H9 257 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 EPM2AIP1Q7L775 607 aaPredicted RBP3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 IRF2BP2Q7Z5L9 587 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 TMC3Q7Z5M5 1100 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 SYCP3Q8IZU3 236 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 CCDC24Q8N4L8 307 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 MYCT1Q8N699 235 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 METTL13Q8N6R0 699 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 LRRC57Q8N9N7 239 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 CCDC197Q8NCU1 140 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 SLC17A8Q8NDX2 589 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 GMCL1P1Q8NEA9 526 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 ETNPPLQ8TBG4 499 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 TBC1D16Q8TBP0 767 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 CCHCR1Q8TD31 782 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 GRK7Q8WTQ7 553 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 DYDC1Q8WWB3 177 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 CENPTQ96BT3 561 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 CHMP6Q96FZ7 201 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 HES6Q96HZ4 224 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 FAM81BQ96LP2 452 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 NACC1Q96RE7 527 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 IWS1Q96ST2 819 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 NCAPGQ9BPX3 1015 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 HINFPQ9BQA5 517 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 SELENOSQ9BQE4 189 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 NUDT12Q9BQG2 462 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 REEP2Q9BRK0 252 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 AP1M1Q9BXS5 423 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 PACSIN1Q9BY11 444 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 STK33Q9BYT3 514 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 WDR11Q9BZH6 1224 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 ZC3H12CQ9C0D7 883 aaKnown RBP3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 INTS2Q9H0H0 1204 aaKnown RBP3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 DDX47Q9H0S4 455 aaKnown RBP3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 BHMT2Q9H2M3 363 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 DPH5Q9H2P9 285 aa3.61□□□□□ -1.83
HMGN1P18-201ENST00000457642 RABEP2Q9H5N1 569 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms