RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 FAM186BQ8IYM0 893 aa18.26■□□□□ 0.51
CCDC43-202ENST00000457422 SPAG5Q96R06 1193 aa18.26■□□□□ 0.51
CCDC43-202ENST00000457422 HOMER2Q9NSB8 354 aa18.26■□□□□ 0.51
CCDC43-202ENST00000457422 RNF216Q9NWF9 866 aaPredicted RBP18.26■□□□□ 0.51
CCDC43-202ENST00000457422 PCDHB13Q9Y5F0 798 aa18.26■□□□□ 0.51
CCDC43-202ENST00000457422 ARHGEF35A5YM69 484 aa18.26■□□□□ 0.51
CCDC43-202ENST00000457422 BTNL10A8MVZ5 291 aa18.26■□□□□ 0.51
CCDC43-202ENST00000457422 PPP1R37O75864 691 aa18.26■□□□□ 0.51
CCDC43-202ENST00000457422 P4HBP07237 508 aaKnown RBP18.26■□□□□ 0.51
CCDC43-202ENST00000457422 JAM2P57087 298 aa18.26■□□□□ 0.51
CCDC43-202ENST00000457422 ENOX2Q16206 610 aaKnown RBP18.26■□□□□ 0.51
CCDC43-202ENST00000457422 ODR4Q5SWX8 454 aa18.26■□□□□ 0.51
CCDC43-202ENST00000457422 HS2ST1Q7LGA3 356 aa18.26■□□□□ 0.51
CCDC43-202ENST00000457422 MMGT1Q8N4V1 131 aa18.26■□□□□ 0.51
CCDC43-202ENST00000457422 GOLGA5Q8TBA6 731 aa18.26■□□□□ 0.51
CCDC43-202ENST00000457422 SYTL5Q8TDW5 730 aaPredicted RBP18.26■□□□□ 0.51
CCDC43-202ENST00000457422 TLR10Q9BXR5 811 aa18.26■□□□□ 0.51
CCDC43-202ENST00000457422 AGO4Q9HCK5 861 aaKnown RBP18.26■□□□□ 0.51
CCDC43-202ENST00000457422 PPP1R9AQ9ULJ8 1098 aa18.26■□□□□ 0.51
CCDC43-202ENST00000457422 LYPLA2O95372 231 aa18.25■□□□□ 0.51
CCDC43-202ENST00000457422 COG2Q14746 738 aa18.25■□□□□ 0.51
CCDC43-202ENST00000457422 TKFCQ3LXA3 575 aa18.25■□□□□ 0.51
CCDC43-202ENST00000457422 SLC9A9Q8IVB4 645 aa18.25■□□□□ 0.51
CCDC43-202ENST00000457422 AGPAT3Q9NRZ7 376 aa18.25■□□□□ 0.51
CCDC43-202ENST00000457422 GCNT4Q9P109 453 aa18.25■□□□□ 0.51
CCDC43-202ENST00000457422 ADAMTS1Q9UHI8 967 aa18.25■□□□□ 0.51
CCDC43-202ENST00000457422 DBR1Q9UK59 544 aaKnown RBP18.25■□□□□ 0.51
CCDC43-202ENST00000457422 PCDHGC5Q9Y5F6 944 aa18.25■□□□□ 0.51
CCDC43-202ENST00000457422 BUB1O43683 1085 aa18.24■□□□□ 0.51
CCDC43-202ENST00000457422 HIP1RO75146 1068 aa18.24■□□□□ 0.51
CCDC43-202ENST00000457422 FLOT1O75955 427 aa18.24■□□□□ 0.51
CCDC43-202ENST00000457422 MAPTP10636 758 aaKnown RBP18.24■□□□□ 0.51
CCDC43-202ENST00000457422 VCAM1P19320 739 aa18.24■□□□□ 0.51
CCDC43-202ENST00000457422 MRPS9P82933 396 aaKnown RBP18.24■□□□□ 0.51
CCDC43-202ENST00000457422 PTK2Q05397 1052 aa18.24■□□□□ 0.51
CCDC43-202ENST00000457422 ITGB3BPQ13352 177 aaPredicted RBP18.24■□□□□ 0.51
CCDC43-202ENST00000457422 MYBPC2Q14324 1141 aa18.24■□□□□ 0.51
CCDC43-202ENST00000457422 DAW1Q8N136 415 aa18.24■□□□□ 0.51
CCDC43-202ENST00000457422 RBM46Q8TBY0 533 aaKnown RBP18.24■□□□□ 0.51
CCDC43-202ENST00000457422 COG1Q8WTW3 980 aa18.24■□□□□ 0.51
CCDC43-202ENST00000457422 RUBCNQ92622 972 aa18.24■□□□□ 0.51
CCDC43-202ENST00000457422 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.24■□□□□ 0.51
CCDC43-202ENST00000457422 FDX1P10109 184 aa18.24■□□□□ 0.51
CCDC43-202ENST00000457422 KLRC1P26715 233 aa18.24■□□□□ 0.51
CCDC43-202ENST00000457422 OAS2P29728 719 aaKnown RBP18.24■□□□□ 0.51
CCDC43-202ENST00000457422 GMPSP49915 693 aaPredicted RBP18.24■□□□□ 0.51
CCDC43-202ENST00000457422 MTMR2Q13614 643 aa18.24■□□□□ 0.51
CCDC43-202ENST00000457422 NFRKBQ6P4R8 1299 aa18.24■□□□□ 0.51
CCDC43-202ENST00000457422 SAMD7Q7Z3H4 446 aa18.24■□□□□ 0.51
CCDC43-202ENST00000457422 MICALL2Q8IY33 904 aa18.24■□□□□ 0.51
CCDC43-202ENST00000457422 TMEM174Q8WUU8 243 aa18.24■□□□□ 0.51
CCDC43-202ENST00000457422 AJAP1Q9UKB5 411 aaPredicted RBP18.24■□□□□ 0.51
CCDC43-202ENST00000457422 NCK2O43639 380 aa18.23■□□□□ 0.51
CCDC43-202ENST00000457422 C2orf54Q08AI8 447 aa18.23■□□□□ 0.51
CCDC43-202ENST00000457422 ALCAMQ13740 583 aa18.23■□□□□ 0.51
CCDC43-202ENST00000457422 PPP2R5AQ15172 486 aa18.23■□□□□ 0.51
CCDC43-202ENST00000457422 MAP9Q49MG5 647 aa18.23■□□□□ 0.51
CCDC43-202ENST00000457422 PADI6Q6TGC4 694 aa18.23■□□□□ 0.51
CCDC43-202ENST00000457422 ZNF571Q7Z3V5 609 aaPredicted RBP18.23■□□□□ 0.51
CCDC43-202ENST00000457422 TBC1D22BQ9NU19 505 aa18.23■□□□□ 0.51
CCDC43-202ENST00000457422 NENFQ9UMX5 172 aa18.23■□□□□ 0.51
CCDC43-202ENST00000457422 ZHX2Q9Y6X8 837 aa18.23■□□□□ 0.51
CCDC43-202ENST00000457422 EIF2AK2P19525 551 aaKnown RBP18.22■□□□□ 0.51
CCDC43-202ENST00000457422 MTMR1Q13613 665 aa18.22■□□□□ 0.51
CCDC43-202ENST00000457422 KIAA0753Q2KHM9 967 aa18.22■□□□□ 0.51
CCDC43-202ENST00000457422 TBC1D10BQ4KMP7 808 aaPredicted RBP18.22■□□□□ 0.51
CCDC43-202ENST00000457422 TAAR1Q96RJ0 339 aa18.22■□□□□ 0.51
CCDC43-202ENST00000457422 ZMYND15Q9H091 742 aa18.22■□□□□ 0.51
CCDC43-202ENST00000457422 RPAP3Q9H6T3 665 aaPredicted RBP18.22■□□□□ 0.51
CCDC43-202ENST00000457422 SUGCTQ9HAC7 445 aa18.22■□□□□ 0.51
CCDC43-202ENST00000457422 RNF14Q9UBS8 474 aa18.22■□□□□ 0.51
CCDC43-202ENST00000457422 HACL1Q9UJ83 578 aa18.22■□□□□ 0.51
CCDC43-202ENST00000457422 FRMD4BQ9Y2L6 1034 aa18.22■□□□□ 0.51
CCDC43-202ENST00000457422 DAAM1Q9Y4D1 1078 aa18.22■□□□□ 0.51
CCDC43-202ENST00000457422 EIF3JO75822 258 aaKnown RBP18.22■□□□□ 0.51
CCDC43-202ENST00000457422 FMO5P49326 533 aa18.22■□□□□ 0.51
CCDC43-202ENST00000457422 CYP2J2P51589 502 aa18.22■□□□□ 0.51
CCDC43-202ENST00000457422 NAP1L1P55209 391 aaKnown RBP18.22■□□□□ 0.51
CCDC43-202ENST00000457422 RPS6P62753 249 aaKnown RBP18.22■□□□□ 0.51
CCDC43-202ENST00000457422 CASP8Q14790 479 aa18.22■□□□□ 0.51
CCDC43-202ENST00000457422 PGM5Q15124 567 aa18.22■□□□□ 0.51
CCDC43-202ENST00000457422 SPATA4Q8NEY3 305 aa18.22■□□□□ 0.51
CCDC43-202ENST00000457422 PACSIN1Q9BY11 444 aa18.22■□□□□ 0.51
CCDC43-202ENST00000457422 LARSQ9P2J5 1176 aaKnown RBP18.22■□□□□ 0.51
CCDC43-202ENST00000457422 PALMO75781 387 aa18.21■□□□□ 0.51
CCDC43-202ENST00000457422 QARSP47897 775 aaKnown RBP18.21■□□□□ 0.51
CCDC43-202ENST00000457422 RARRES1P49788 294 aa18.21■□□□□ 0.51
CCDC43-202ENST00000457422 GPS2Q13227 327 aa18.21■□□□□ 0.51
CCDC43-202ENST00000457422 NBPF12Q5TAG4 269 aaPredicted RBP18.21■□□□□ 0.51
CCDC43-202ENST00000457422 CCDC70Q6NSX1 233 aa18.21■□□□□ 0.51
CCDC43-202ENST00000457422 GJB7Q6PEY0 223 aa18.21■□□□□ 0.51
CCDC43-202ENST00000457422 CTDP1Q9Y5B0 961 aaPredicted RBP18.21■□□□□ 0.51
CCDC43-202ENST00000457422 RLFQ13129 1914 aa18.21■□□□□ 0.51
CCDC43-202ENST00000457422 ZBED4O75132 1171 aa18.21■□□□□ 0.51
CCDC43-202ENST00000457422 MAEAQ7L5Y9 396 aa18.21■□□□□ 0.51
CCDC43-202ENST00000457422 PSMB7Q99436 277 aa18.21■□□□□ 0.51
CCDC43-202ENST00000457422 TIPINQ9BVW5 301 aa18.21■□□□□ 0.51
CCDC43-202ENST00000457422 VIPAS39Q9H9C1 493 aa18.21■□□□□ 0.51
CCDC43-202ENST00000457422 PPP1R1BQ9UD71 204 aaPredicted RBP18.21■□□□□ 0.51
CCDC43-202ENST00000457422 NAGPAQ9UK23 515 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms