RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 OSMRQ99650 979 aa13.54□□□□□ -0.24
LMCD1-206ENST00000456506 ELAC1Q9H777 363 aaKnown RBP13.54□□□□□ -0.24
LMCD1-206ENST00000456506 ZNF302Q9NR11 478 aa13.54□□□□□ -0.24
LMCD1-206ENST00000456506 RBM28Q9NW13 759 aaKnown RBP13.54□□□□□ -0.24
LMCD1-206ENST00000456506 TMEM161AQ9NX61 479 aa13.54□□□□□ -0.24
LMCD1-206ENST00000456506 LZTS1Q9Y250 596 aa13.54□□□□□ -0.24
LMCD1-206ENST00000456506 PCDHB12Q9Y5F1 795 aa13.54□□□□□ -0.24
LMCD1-206ENST00000456506 MAFBQ9Y5Q3 323 aaPredicted RBP13.54□□□□□ -0.24
LMCD1-206ENST00000456506 V9GY48 417 aaPredicted RBP13.54□□□□□ -0.24
LMCD1-206ENST00000456506 MTCL1Q9Y4B5 1905 aaKnown RBP13.53□□□□□ -0.24
LMCD1-206ENST00000456506 hCG_1984214I3L0E3 225 aa13.53□□□□□ -0.24
LMCD1-206ENST00000456506 SIGLEC14Q08ET2 396 aa13.53□□□□□ -0.24
LMCD1-206ENST00000456506 KIZQ2M2Z5 673 aa13.53□□□□□ -0.24
LMCD1-206ENST00000456506 ADCK5Q3MIX3 580 aa13.53□□□□□ -0.24
LMCD1-206ENST00000456506 SWSAP1Q6NVH7 229 aa13.53□□□□□ -0.24
LMCD1-206ENST00000456506 RASEFQ8IZ41 740 aa13.53□□□□□ -0.24
LMCD1-206ENST00000456506 FBXL6Q8N531 539 aa13.53□□□□□ -0.24
LMCD1-206ENST00000456506 ZNF713Q8N859 430 aaPredicted RBP13.53□□□□□ -0.24
LMCD1-206ENST00000456506 PBXIP1Q96AQ6 731 aa13.53□□□□□ -0.24
LMCD1-206ENST00000456506 CASD1Q96PB1 797 aa13.53□□□□□ -0.24
LMCD1-206ENST00000456506 CDCA3Q99618 268 aaPredicted RBP13.53□□□□□ -0.24
LMCD1-206ENST00000456506 GINS2Q9Y248 185 aa13.53□□□□□ -0.24
LMCD1-206ENST00000456506 NID2Q14112 1375 aa13.53□□□□□ -0.24
LMCD1-206ENST00000456506 TDRD15B5MCY1 1934 aaKnown RBP13.52□□□□□ -0.24
LMCD1-206ENST00000456506 HIDE1A8MVS5 230 aa13.52□□□□□ -0.25
LMCD1-206ENST00000456506 IPO5O00410 1097 aaKnown RBP13.52□□□□□ -0.25
LMCD1-206ENST00000456506 GPR182O15218 404 aa13.52□□□□□ -0.25
LMCD1-206ENST00000456506 ZBTB43O43298 467 aa13.52□□□□□ -0.25
LMCD1-206ENST00000456506 VTNP04004 478 aa13.52□□□□□ -0.25
LMCD1-206ENST00000456506 CENPBP07199 599 aaPredicted RBP13.52□□□□□ -0.25
LMCD1-206ENST00000456506 VCPP55072 806 aaKnown RBP13.52□□□□□ -0.25
LMCD1-206ENST00000456506 APOBRQ0VD83 1088 aa13.52□□□□□ -0.25
LMCD1-206ENST00000456506 RTN1Q16799 776 aa13.52□□□□□ -0.25
LMCD1-206ENST00000456506 TSGA10IPQ3SY00 556 aa13.52□□□□□ -0.25
LMCD1-206ENST00000456506 FAM160B1Q5W0V3 765 aa13.52□□□□□ -0.25
LMCD1-206ENST00000456506 PDE12Q6L8Q7 609 aaKnown RBP13.52□□□□□ -0.25
LMCD1-206ENST00000456506 ANKRD54Q6NXT1 300 aa13.52□□□□□ -0.25
LMCD1-206ENST00000456506 PDXDC2PQ6P474 469 aa13.52□□□□□ -0.25
LMCD1-206ENST00000456506 PLA2G4DQ86XP0 818 aa13.52□□□□□ -0.25
LMCD1-206ENST00000456506 BBXQ8WY36 941 aaPredicted RBP13.52□□□□□ -0.25
LMCD1-206ENST00000456506 MRPS27Q92552 414 aaKnown RBP13.52□□□□□ -0.25
LMCD1-206ENST00000456506 LENG9Q96B70 501 aa13.52□□□□□ -0.25
LMCD1-206ENST00000456506 PPP1R16BQ96T49 567 aa13.52□□□□□ -0.25
LMCD1-206ENST00000456506 ADAMTS10Q9H324 1103 aa13.52□□□□□ -0.25
LMCD1-206ENST00000456506 AAASQ9NRG9 546 aa13.52□□□□□ -0.25
LMCD1-206ENST00000456506 VPS13AQ96RL7 3174 aa13.51□□□□□ -0.25
LMCD1-206ENST00000456506 ESYT2A0FGR8 921 aa13.51□□□□□ -0.25
LMCD1-206ENST00000456506 FSD2A1L4K1 749 aa13.51□□□□□ -0.25
LMCD1-206ENST00000456506 DENND3A2RUS2 1198 aa13.51□□□□□ -0.25
LMCD1-206ENST00000456506 BACH1O14867 736 aa13.51□□□□□ -0.25
LMCD1-206ENST00000456506 LAG3P18627 525 aa13.51□□□□□ -0.25
LMCD1-206ENST00000456506 PKN1Q16512 942 aa13.51□□□□□ -0.25
LMCD1-206ENST00000456506 PTPN21Q16825 1174 aa13.51□□□□□ -0.25
LMCD1-206ENST00000456506 PFKFB3Q16875 520 aaPredicted RBP13.51□□□□□ -0.25
LMCD1-206ENST00000456506 CLLU1OSQ5K130 101 aa13.51□□□□□ -0.25
LMCD1-206ENST00000456506 JAKMIP3Q5VZ66 844 aa13.51□□□□□ -0.25
LMCD1-206ENST00000456506 ZNF746Q6NUN9 644 aaPredicted RBP13.51□□□□□ -0.25
LMCD1-206ENST00000456506 MIS18BP1Q6P0N0 1132 aa13.51□□□□□ -0.25
LMCD1-206ENST00000456506 DHX32Q7L7V1 743 aaKnown RBP13.51□□□□□ -0.25
LMCD1-206ENST00000456506 ZNF598Q86UK7 904 aaKnown RBP13.51□□□□□ -0.25
LMCD1-206ENST00000456506 THNSL1Q8IYQ7 743 aa13.51□□□□□ -0.25
LMCD1-206ENST00000456506 RPGRIP1Q96KN7 1286 aa13.51□□□□□ -0.25
LMCD1-206ENST00000456506 NEK1Q96PY6 1258 aa13.51□□□□□ -0.25
LMCD1-206ENST00000456506 ZMYND12Q9H0C1 365 aa13.51□□□□□ -0.25
LMCD1-206ENST00000456506 TMEM117Q9H0C3 514 aa13.51□□□□□ -0.25
LMCD1-206ENST00000456506 ANO2Q9NQ90 1003 aa13.51□□□□□ -0.25
LMCD1-206ENST00000456506 CDH22Q9UJ99 828 aa13.51□□□□□ -0.25
LMCD1-206ENST00000456506 ZNF862O60290 1169 aa13.5□□□□□ -0.25
LMCD1-206ENST00000456506 IBSPP21815 317 aaPredicted RBP13.5□□□□□ -0.25
LMCD1-206ENST00000456506 PBX3P40426 434 aa13.5□□□□□ -0.25
LMCD1-206ENST00000456506 CLCN3P51790 818 aa13.5□□□□□ -0.25
LMCD1-206ENST00000456506 RCAN1P53805 252 aa13.5□□□□□ -0.25
LMCD1-206ENST00000456506 PTPN5P54829 565 aa13.5□□□□□ -0.25
LMCD1-206ENST00000456506 ODR4Q5SWX8 454 aa13.5□□□□□ -0.25
LMCD1-206ENST00000456506 PLPP4Q5VZY2 271 aa13.5□□□□□ -0.25
LMCD1-206ENST00000456506 KCNT2Q6UVM3 1135 aa13.5□□□□□ -0.25
LMCD1-206ENST00000456506 SMAP1Q8IYB5 467 aaPredicted RBP13.5□□□□□ -0.25
LMCD1-206ENST00000456506 GLT8D2Q9H1C3 349 aa13.5□□□□□ -0.25
LMCD1-206ENST00000456506 ATP6V0A4Q9HBG4 840 aa13.5□□□□□ -0.25
LMCD1-206ENST00000456506 RNF216Q9NWF9 866 aaPredicted RBP13.5□□□□□ -0.25
LMCD1-206ENST00000456506 KLF18A0A0U1RQI7 1052 aa13.49□□□□□ -0.25
LMCD1-206ENST00000456506 CIITAP33076 1130 aa13.49□□□□□ -0.25
LMCD1-206ENST00000456506 ADD1P35611 737 aaKnown RBP13.49□□□□□ -0.25
LMCD1-206ENST00000456506 ZNF76P36508 570 aa13.49□□□□□ -0.25
LMCD1-206ENST00000456506 IRX6P78412 446 aaPredicted RBP13.49□□□□□ -0.25
LMCD1-206ENST00000456506 SPOUT1Q5T280 376 aaKnown RBP13.49□□□□□ -0.25
LMCD1-206ENST00000456506 SYNE3Q6ZMZ3 975 aa13.49□□□□□ -0.25
LMCD1-206ENST00000456506 SKAP1Q86WV1 359 aa13.49□□□□□ -0.25
LMCD1-206ENST00000456506 ECHDC2Q86YB7 292 aa13.49□□□□□ -0.25
LMCD1-206ENST00000456506 SLC39A11Q8N1S5 342 aa13.49□□□□□ -0.25
LMCD1-206ENST00000456506 MICAL1Q8TDZ2 1067 aa13.49□□□□□ -0.25
LMCD1-206ENST00000456506 CEP89Q96ST8 783 aa13.49□□□□□ -0.25
LMCD1-206ENST00000456506 PRRX2Q99811 253 aa13.49□□□□□ -0.25
LMCD1-206ENST00000456506 TCF25Q9BQ70 676 aa13.49□□□□□ -0.25
LMCD1-206ENST00000456506 ZNF577Q9BSK1 485 aa13.49□□□□□ -0.25
LMCD1-206ENST00000456506 TBC1D22BQ9NU19 505 aa13.49□□□□□ -0.25
LMCD1-206ENST00000456506 GABBR1Q9UBS5 961 aa13.49□□□□□ -0.25
LMCD1-206ENST00000456506 DCHS1Q96JQ0 3298 aa13.49□□□□□ -0.25
LMCD1-206ENST00000456506 CACNA1HO95180 2353 aa13.49□□□□□ -0.25
LMCD1-206ENST00000456506 DOCK8Q8NF50 2099 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms