RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 KIRREL3Q8IZU9 778 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 LRRC43Q8N309 656 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 MREGQ8N565 214 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 PPP2R3CQ969Q6 453 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 DNAJC7Q99615 494 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 PABPC3Q9H361 631 aaKnown RBP5.35□□□□□ -1.55
PCDH9-203ENST00000456367 C1orf112Q9NSG2 853 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 RBM12Q9NTZ6 932 aaKnown RBP5.35□□□□□ -1.55
PCDH9-203ENST00000456367 BTBD7Q9P203 1132 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 PNMA2Q9UL42 364 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 ATP11BQ9Y2G3 1177 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 PLEKHG3A1L390 1219 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 SLC26A4O43511 780 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 CAND2O75155 1236 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 ATP5BP06576 529 aaKnown RBP5.35□□□□□ -1.55
PCDH9-203ENST00000456367 KRT4P19013 534 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 ATP4AP20648 1035 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 EEF1B2P24534 225 aaKnown RBP5.35□□□□□ -1.55
PCDH9-203ENST00000456367 RGS2P41220 211 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 EXOSC10Q01780 885 aaKnown RBP5.35□□□□□ -1.55
PCDH9-203ENST00000456367 GRIN1Q05586 938 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 ALCAMQ13740 583 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 Q4G0T1 1027 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 RABGAP1LQ5R372 815 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 TTLL11Q8NHH1 800 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 JADE3Q92613 823 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 INPP5DQ92835 1189 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 ARL8AQ96BM9 186 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 MTBPQ96DY7 904 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 RBM41Q96IZ5 413 aaKnown RBP5.35□□□□□ -1.55
PCDH9-203ENST00000456367 ANLNQ9NQW6 1124 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 CNOT7Q9UIV1 285 aaKnown RBP5.35□□□□□ -1.55
PCDH9-203ENST00000456367 BAG5Q9UL15 447 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 PXDNLA1KZ92 1463 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 SMIM31A0A1B0GVY4 71 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 C16orf96A6NNT2 1141 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 SH3BP5O60239 455 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 PHF2O75151 1096 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 CALB2P22676 271 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 RBM5P52756 815 aaKnown RBP eCLIP5.35□□□□□ -1.55
PCDH9-203ENST00000456367 GPC5P78333 572 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 MAPRE2Q15555 327 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 NAB2Q15742 525 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 CEP55Q53EZ4 464 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 CASC4Q6P4E1 433 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 RNF207Q6ZRF8 634 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 PDZD4Q76G19 769 aaPredicted RBP5.35□□□□□ -1.55
PCDH9-203ENST00000456367 EGFL6Q8IUX8 553 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 LRRC34Q8IZ02 419 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 SLC26A7Q8TE54 656 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 MAGEB18Q96M61 343 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 ERGIC2Q96RQ1 377 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 GORASP1Q9BQQ3 440 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 MRPL46Q9H2W6 279 aaKnown RBP5.35□□□□□ -1.55
PCDH9-203ENST00000456367 RHBDL2Q9NX52 303 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 ATXN10Q9UBB4 475 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 PDS5AQ29RF7 1337 aaKnown RBP5.35□□□□□ -1.55
PCDH9-203ENST00000456367 PPIP5K2O43314 1243 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 TPD52L2O43399 206 aaKnown RBP5.35□□□□□ -1.55
PCDH9-203ENST00000456367 TRAPPC3O43617 180 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 TJP3O95049 919 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 TMOD1P28289 359 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 INPP1P49441 399 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 TBX2Q13207 712 aaPredicted RBP5.35□□□□□ -1.55
PCDH9-203ENST00000456367 PARP10Q53GL7 1025 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 ZNF662Q6ZS27 426 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 ZNF804AQ7Z570 1209 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 SETD3Q86TU7 594 aaPredicted RBP5.35□□□□□ -1.55
PCDH9-203ENST00000456367 SGMS1Q86VZ5 419 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 ATP11CQ8NB49 1132 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 NT5C1BQ96P26 610 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 CHP1Q99653 195 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 SIKE1Q9BRV8 207 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 ERP44Q9BS26 406 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 OSBPL8Q9BZF1 889 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 EMILIN3Q9NT22 766 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 SUCLA2Q9P2R7 463 aaPredicted RBP5.35□□□□□ -1.55
PCDH9-203ENST00000456367 FBXO2Q9UK22 296 aaPredicted RBP5.35□□□□□ -1.55
PCDH9-203ENST00000456367 MAD1L1Q9Y6D9 718 aa5.35□□□□□ -1.55
PCDH9-203ENST00000456367 POTEFA5A3E0 1075 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 KPNA7A9QM74 516 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 SGK1O00141 431 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 SHOX2O60902 331 aaPredicted RBP5.34□□□□□ -1.55
PCDH9-203ENST00000456367 E2F6O75461 281 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 FOSP01100 380 aaPredicted RBP5.34□□□□□ -1.55
PCDH9-203ENST00000456367 LDHBP07195 334 aaKnown RBP5.34□□□□□ -1.55
PCDH9-203ENST00000456367 POTEIP0CG38 1075 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 ATF7P17544 494 aaPredicted RBP5.34□□□□□ -1.55
PCDH9-203ENST00000456367 ITGA6P23229 1130 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 PTPN4P29074 926 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 USP11P51784 963 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 MAP3K7CLP57077 242 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 RAB15P59190 212 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 ALX1Q15699 326 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 PCNX4Q63HM2 1172 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 POTEEQ6S8J3 1075 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 ADSSL1Q8N142 457 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 RNF169Q8NCN4 708 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 ZNF280CQ8ND82 737 aa5.34□□□□□ -1.55
PCDH9-203ENST00000456367 SMCR8Q8TEV9 937 aaPredicted RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms