RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 USP39Q53GS9 565 aaKnown RBP5.37□□□□□ -1.55
R3HDM1-212ENST00000456040 CC2D1AQ6P1N0 951 aaPredicted RBP5.37□□□□□ -1.55
R3HDM1-212ENST00000456040 GPR155Q7Z3F1 870 aa5.37□□□□□ -1.55
R3HDM1-212ENST00000456040 CALML6Q8TD86 181 aa5.37□□□□□ -1.55
R3HDM1-212ENST00000456040 APPBP2Q92624 585 aa5.37□□□□□ -1.55
R3HDM1-212ENST00000456040 AMNQ9BXJ7 453 aa5.37□□□□□ -1.55
R3HDM1-212ENST00000456040 OR10A5Q9H207 317 aa5.37□□□□□ -1.55
R3HDM1-212ENST00000456040 INTS7Q9NVH2 962 aaKnown RBP5.37□□□□□ -1.55
R3HDM1-212ENST00000456040 MAGEC2Q9UBF1 373 aaPredicted RBP5.37□□□□□ -1.55
R3HDM1-212ENST00000456040 ZFR2Q9UPR6 939 aaKnown RBP5.37□□□□□ -1.55
R3HDM1-212ENST00000456040 SLC4A7Q9Y6M7 1214 aa5.37□□□□□ -1.55
R3HDM1-212ENST00000456040 RASSF10A6NK89 507 aa5.36□□□□□ -1.55
R3HDM1-212ENST00000456040 GOLGA6L22H0YM25 854 aa5.36□□□□□ -1.55
R3HDM1-212ENST00000456040 KRT37O76014 449 aa5.36□□□□□ -1.55
R3HDM1-212ENST00000456040 JMJD7P0C870 316 aa5.36□□□□□ -1.55
R3HDM1-212ENST00000456040 SDSP20132 328 aa5.36□□□□□ -1.55
R3HDM1-212ENST00000456040 ETV4P43268 484 aa5.36□□□□□ -1.55
R3HDM1-212ENST00000456040 RANGAP1P46060 587 aaPredicted RBP5.36□□□□□ -1.55
R3HDM1-212ENST00000456040 ZMAT1Q5H9K5 638 aa5.36□□□□□ -1.55
R3HDM1-212ENST00000456040 CATSPEREQ5SY80 951 aa5.36□□□□□ -1.55
R3HDM1-212ENST00000456040 PIK3R6Q5UE93 754 aa5.36□□□□□ -1.55
R3HDM1-212ENST00000456040 C16orf86Q6ZW13 317 aa5.36□□□□□ -1.55
R3HDM1-212ENST00000456040 NEU4Q8WWR8 484 aaPredicted RBP5.36□□□□□ -1.55
R3HDM1-212ENST00000456040 SCYL1Q96KG9 808 aa5.36□□□□□ -1.55
R3HDM1-212ENST00000456040 LMF1Q96S06 567 aa5.36□□□□□ -1.55
R3HDM1-212ENST00000456040 ZDHHC5Q9C0B5 715 aa5.36□□□□□ -1.55
R3HDM1-212ENST00000456040 PTPDC1A2A3K4 754 aa5.35□□□□□ -1.55
R3HDM1-212ENST00000456040 H7C1D1 291 aa5.35□□□□□ -1.55
R3HDM1-212ENST00000456040 CNOT4O95628 575 aaKnown RBP5.35□□□□□ -1.55
R3HDM1-212ENST00000456040 ZNF888P0CJ79 500 aaPredicted RBP5.35□□□□□ -1.55
R3HDM1-212ENST00000456040 LMO1P25800 156 aa5.35□□□□□ -1.55
R3HDM1-212ENST00000456040 ADCY8P40145 1251 aa5.35□□□□□ -1.55
R3HDM1-212ENST00000456040 FNTBP49356 437 aa5.35□□□□□ -1.55
R3HDM1-212ENST00000456040 KIF11P52732 1056 aa5.35□□□□□ -1.55
R3HDM1-212ENST00000456040 ZNF174Q15697 407 aa5.35□□□□□ -1.55
R3HDM1-212ENST00000456040 CFAP100Q494V2 611 aa5.35□□□□□ -1.55
R3HDM1-212ENST00000456040 CDCA2Q69YH5 1023 aaPredicted RBP5.35□□□□□ -1.55
R3HDM1-212ENST00000456040 LRSAM1Q6UWE0 723 aa5.35□□□□□ -1.55
R3HDM1-212ENST00000456040 OTOP2Q7RTS6 562 aa5.35□□□□□ -1.55
R3HDM1-212ENST00000456040 ERCC4Q92889 916 aaPredicted RBP5.35□□□□□ -1.55
R3HDM1-212ENST00000456040 E2F7Q96AV8 911 aa5.35□□□□□ -1.55
R3HDM1-212ENST00000456040 ACSS2Q9NR19 701 aa5.35□□□□□ -1.55
R3HDM1-212ENST00000456040 FANCLQ9NW38 375 aa5.35□□□□□ -1.55
R3HDM1-212ENST00000456040 A0A0G2JNJ9 132 aa5.34□□□□□ -1.55
R3HDM1-212ENST00000456040 TRAF5O00463 557 aa5.34□□□□□ -1.55
R3HDM1-212ENST00000456040 HMGCRP04035 888 aa5.34□□□□□ -1.55
R3HDM1-212ENST00000456040 KCNQ1P51787 676 aa5.34□□□□□ -1.55
R3HDM1-212ENST00000456040 CD83Q01151 205 aa5.34□□□□□ -1.55
R3HDM1-212ENST00000456040 EIF4HQ15056 248 aaKnown RBP5.34□□□□□ -1.55
R3HDM1-212ENST00000456040 KANK2Q63ZY3 851 aa5.34□□□□□ -1.55
R3HDM1-212ENST00000456040 GRAMD4Q6IC98 578 aa5.34□□□□□ -1.55
R3HDM1-212ENST00000456040 DPY19L2P1Q6NXN4 242 aa5.34□□□□□ -1.55
R3HDM1-212ENST00000456040 MEGF9Q9H1U4 602 aa5.34□□□□□ -1.55
R3HDM1-212ENST00000456040 PCIF1Q9H4Z3 704 aa5.34□□□□□ -1.55
R3HDM1-212ENST00000456040 B4GALT6Q9UBX8 382 aa5.34□□□□□ -1.55
R3HDM1-212ENST00000456040 Q9UFV3 132 aa5.34□□□□□ -1.55
R3HDM1-212ENST00000456040 PTPN22Q9Y2R2 807 aa5.34□□□□□ -1.55
R3HDM1-212ENST00000456040 CD2APQ9Y5K6 639 aa5.34□□□□□ -1.55
R3HDM1-212ENST00000456040 CBX4O00257 560 aa5.33□□□□□ -1.56
R3HDM1-212ENST00000456040 NARSO43776 548 aaKnown RBP5.33□□□□□ -1.56
R3HDM1-212ENST00000456040 CYP17A1P05093 508 aa5.33□□□□□ -1.56
R3HDM1-212ENST00000456040 ADH4P08319 380 aa5.33□□□□□ -1.56
R3HDM1-212ENST00000456040 COMTP21964 271 aa5.33□□□□□ -1.56
R3HDM1-212ENST00000456040 APEX1P27695 318 aaKnown RBP5.33□□□□□ -1.56
R3HDM1-212ENST00000456040 ATXN1P54253 815 aaKnown RBP5.33□□□□□ -1.56
R3HDM1-212ENST00000456040 RRADP55042 308 aa5.33□□□□□ -1.56
R3HDM1-212ENST00000456040 RAC3P60763 192 aa5.33□□□□□ -1.56
R3HDM1-212ENST00000456040 ALDH6A1Q02252 535 aaKnown RBP5.33□□□□□ -1.56
R3HDM1-212ENST00000456040 MAP3K12Q12852 859 aa5.33□□□□□ -1.56
R3HDM1-212ENST00000456040 MOGSQ13724 837 aa5.33□□□□□ -1.56
R3HDM1-212ENST00000456040 TMEM200BQ69YZ2 307 aa5.33□□□□□ -1.56
R3HDM1-212ENST00000456040 TCTN3Q6NUS6 607 aa5.33□□□□□ -1.56
R3HDM1-212ENST00000456040 RTN4RL1Q86UN2 441 aaPredicted RBP5.33□□□□□ -1.56
R3HDM1-212ENST00000456040 EDAQ92838 391 aa5.33□□□□□ -1.56
R3HDM1-212ENST00000456040 NINJ1Q92982 152 aa5.33□□□□□ -1.56
R3HDM1-212ENST00000456040 GNRHR2Q96P88 292 aa5.33□□□□□ -1.56
R3HDM1-212ENST00000456040 LRRC37BQ96QE4 947 aa5.33□□□□□ -1.56
R3HDM1-212ENST00000456040 FOXB1Q99853 325 aa5.33□□□□□ -1.56
R3HDM1-212ENST00000456040 CDC42EP3Q9UKI2 254 aa5.33□□□□□ -1.56
R3HDM1-212ENST00000456040 MRPL42Q9Y6G3 142 aaKnown RBP5.33□□□□□ -1.56
R3HDM1-212ENST00000456040 DVL2O14641 736 aa5.32□□□□□ -1.56
R3HDM1-212ENST00000456040 CDC45O75419 566 aa5.32□□□□□ -1.56
R3HDM1-212ENST00000456040 MAFO75444 373 aaPredicted RBP5.32□□□□□ -1.56
R3HDM1-212ENST00000456040 MEOX1P50221 254 aa5.32□□□□□ -1.56
R3HDM1-212ENST00000456040 NEK4P51957 841 aa5.32□□□□□ -1.56
R3HDM1-212ENST00000456040 ROM1Q03395 351 aa5.32□□□□□ -1.56
R3HDM1-212ENST00000456040 C21orf62-AS1Q17RA5 79 aa5.32□□□□□ -1.56
R3HDM1-212ENST00000456040 NME9Q86XW9 330 aa5.32□□□□□ -1.56
R3HDM1-212ENST00000456040 KIF18BQ86Y91 864 aa5.32□□□□□ -1.56
R3HDM1-212ENST00000456040 KIAA1958Q8N8K9 716 aa5.32□□□□□ -1.56
R3HDM1-212ENST00000456040 FOXRED1Q96CU9 486 aaPredicted RBP5.32□□□□□ -1.56
R3HDM1-212ENST00000456040 NEIL1Q96FI4 390 aaPredicted RBP5.32□□□□□ -1.56
R3HDM1-212ENST00000456040 ORAI3Q9BRQ5 295 aa5.32□□□□□ -1.56
R3HDM1-212ENST00000456040 ZKSCAN5Q9Y2L8 839 aa5.32□□□□□ -1.56
R3HDM1-212ENST00000456040 FOXS1O43638 330 aa5.31□□□□□ -1.56
R3HDM1-212ENST00000456040 RNF151Q2KHN1 245 aa5.31□□□□□ -1.56
R3HDM1-212ENST00000456040 TKFCQ3LXA3 575 aa5.31□□□□□ -1.56
R3HDM1-212ENST00000456040 TRIM68Q6AZZ1 485 aa5.31□□□□□ -1.56
R3HDM1-212ENST00000456040 LARP4Q71RC2 724 aaKnown RBP eCLIP5.31□□□□□ -1.56
R3HDM1-212ENST00000456040 NOP9Q86U38 636 aaKnown RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms