RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 LRRC71Q8N4P6 559 aa18.18■□□□□ 0.5
GPC1-206ENST00000455111 MSLNLQ96KJ4 702 aa18.18■□□□□ 0.5
GPC1-206ENST00000455111 UNC45AQ9H3U1 944 aa18.18■□□□□ 0.5
GPC1-206ENST00000455111 CWH43Q9H720 699 aa18.18■□□□□ 0.5
GPC1-206ENST00000455111 CLEC1BQ9P126 229 aa18.18■□□□□ 0.5
GPC1-206ENST00000455111 MBTPS2O43462 519 aa18.17■□□□□ 0.5
GPC1-206ENST00000455111 TDP2O95551 362 aa18.17■□□□□ 0.5
GPC1-206ENST00000455111 FGFR1P11362 822 aa18.17■□□□□ 0.5
GPC1-206ENST00000455111 GNA11P29992 359 aa18.17■□□□□ 0.5
GPC1-206ENST00000455111 CRYBB1P53674 252 aaPredicted RBP18.17■□□□□ 0.5
GPC1-206ENST00000455111 RBM10P98175 930 aaKnown RBP18.17■□□□□ 0.5
GPC1-206ENST00000455111 LRRC55Q6ZSA7 311 aa18.17■□□□□ 0.5
GPC1-206ENST00000455111 EP400NLQ6ZTU2 488 aa18.17■□□□□ 0.5
GPC1-206ENST00000455111 POF1BQ8WVV4 589 aa18.17■□□□□ 0.5
GPC1-206ENST00000455111 TNPO1Q92973 898 aaKnown RBP18.17■□□□□ 0.5
GPC1-206ENST00000455111 CCDC136Q96JN2 1154 aa18.17■□□□□ 0.5
GPC1-206ENST00000455111 UPF3BQ9BZI7 483 aaKnown RBP18.17■□□□□ 0.5
GPC1-206ENST00000455111 IGFLR1Q9H665 355 aa18.17■□□□□ 0.5
GPC1-206ENST00000455111 PSMD10O75832 226 aa18.16■□□□□ 0.5
GPC1-206ENST00000455111 PSAPP07602 524 aa18.16■□□□□ 0.5
GPC1-206ENST00000455111 TARBP2Q15633 366 aaKnown RBP18.16■□□□□ 0.5
GPC1-206ENST00000455111 VN1R2Q8NFZ6 395 aa18.16■□□□□ 0.5
GPC1-206ENST00000455111 TBCKQ8TEA7 893 aa18.16■□□□□ 0.5
GPC1-206ENST00000455111 CCDC12Q8WUD4 166 aaPredicted RBP18.16■□□□□ 0.5
GPC1-206ENST00000455111 MBOAT7Q96N66 472 aa18.16■□□□□ 0.5
GPC1-206ENST00000455111 DISC1Q9NRI5 854 aa18.16■□□□□ 0.5
GPC1-206ENST00000455111 ARID2Q68CP9 1835 aa18.15■□□□□ 0.5
GPC1-206ENST00000455111 OATP04181 439 aa18.15■□□□□ 0.5
GPC1-206ENST00000455111 STAG3L1P0CL83 205 aa18.15■□□□□ 0.5
GPC1-206ENST00000455111 FGFR4P22455 802 aa18.15■□□□□ 0.5
GPC1-206ENST00000455111 ERVFC1P60507 584 aa18.15■□□□□ 0.5
GPC1-206ENST00000455111 PRKCEQ02156 737 aa18.15■□□□□ 0.5
GPC1-206ENST00000455111 SMAD2Q15796 467 aaKnown RBP18.15■□□□□ 0.5
GPC1-206ENST00000455111 TMEM31Q5JXX7 168 aa18.15■□□□□ 0.5
GPC1-206ENST00000455111 MCTP2Q6DN12 878 aa18.15■□□□□ 0.5
GPC1-206ENST00000455111 EFCAB12Q6NXP0 572 aa18.15■□□□□ 0.5
GPC1-206ENST00000455111 SLC24A5Q71RS6 500 aa18.15■□□□□ 0.5
GPC1-206ENST00000455111 CKAP2LQ8IYA6 745 aa18.15■□□□□ 0.5
GPC1-206ENST00000455111 SH2D3AQ9BRG2 576 aa18.15■□□□□ 0.5
GPC1-206ENST00000455111 SH3GLB2Q9NR46 395 aa18.15■□□□□ 0.5
GPC1-206ENST00000455111 GJB4Q9NTQ9 266 aa18.15■□□□□ 0.5
GPC1-206ENST00000455111 TRIOO75962 3097 aa18.14■□□□□ 0.5
GPC1-206ENST00000455111 CYP3A7-CYP3A51PA0A087WV96 503 aa18.14■□□□□ 0.49
GPC1-206ENST00000455111 TBKBP1A7MCY6 615 aa18.14■□□□□ 0.49
GPC1-206ENST00000455111 WDR64B1ANS9 1081 aa18.14■□□□□ 0.49
GPC1-206ENST00000455111 CHMP2AO43633 222 aa18.14■□□□□ 0.49
GPC1-206ENST00000455111 CYP3A7P24462 503 aa18.14■□□□□ 0.49
GPC1-206ENST00000455111 PSMA5P28066 241 aa18.14■□□□□ 0.49
GPC1-206ENST00000455111 PLA2G5P39877 138 aa18.14■□□□□ 0.49
GPC1-206ENST00000455111 USP11P51784 963 aa18.14■□□□□ 0.49
GPC1-206ENST00000455111 NLRP11P59045 1033 aaKnown RBP18.14■□□□□ 0.49
GPC1-206ENST00000455111 PUS10Q3MIT2 529 aaKnown RBP18.14■□□□□ 0.49
GPC1-206ENST00000455111 Q4G0T1 1027 aa18.14■□□□□ 0.49
GPC1-206ENST00000455111 NAALADL2Q58DX5 795 aa18.14■□□□□ 0.49
GPC1-206ENST00000455111 METTL13Q8N6R0 699 aa18.14■□□□□ 0.49
GPC1-206ENST00000455111 CCDC148Q8NFR7 591 aa18.14■□□□□ 0.49
GPC1-206ENST00000455111 ETNPPLQ8TBG4 499 aa18.14■□□□□ 0.49
GPC1-206ENST00000455111 CASD1Q96PB1 797 aa18.14■□□□□ 0.49
GPC1-206ENST00000455111 RIT2Q99578 217 aa18.14■□□□□ 0.49
GPC1-206ENST00000455111 TYW1Q9NV66 732 aaKnown RBP18.14■□□□□ 0.49
GPC1-206ENST00000455111 PCDHA4Q9UN74 947 aa18.14■□□□□ 0.49
GPC1-206ENST00000455111 FSCN2O14926 492 aa18.13■□□□□ 0.49
GPC1-206ENST00000455111 SLC37A4O43826 429 aa18.13■□□□□ 0.49
GPC1-206ENST00000455111 CSDE1O75534 798 aaKnown RBP18.13■□□□□ 0.49
GPC1-206ENST00000455111 REC8O95072 547 aa18.13■□□□□ 0.49
GPC1-206ENST00000455111 ATF7P17544 494 aaPredicted RBP18.13■□□□□ 0.49
GPC1-206ENST00000455111 SSTR3P32745 418 aaPredicted RBP18.13■□□□□ 0.49
GPC1-206ENST00000455111 GPC3P51654 580 aa18.13■□□□□ 0.49
GPC1-206ENST00000455111 NLRP5P59047 1200 aa18.13■□□□□ 0.49
GPC1-206ENST00000455111 STK3Q13188 491 aa18.13■□□□□ 0.49
GPC1-206ENST00000455111 ADHFE1Q8IWW8 467 aa18.13■□□□□ 0.49
GPC1-206ENST00000455111 COLGALT1Q8NBJ5 622 aa18.13■□□□□ 0.49
GPC1-206ENST00000455111 DAGLBQ8NCG7 672 aa18.13■□□□□ 0.49
GPC1-206ENST00000455111 ZNF274Q96GC6 653 aaPredicted RBP18.13■□□□□ 0.49
GPC1-206ENST00000455111 C1orf112Q9NSG2 853 aa18.13■□□□□ 0.49
GPC1-206ENST00000455111 TMEM161AQ9NX61 479 aa18.13■□□□□ 0.49
GPC1-206ENST00000455111 LRFN2Q9ULH4 789 aa18.13■□□□□ 0.49
GPC1-206ENST00000455111 PCDHB7Q9Y5E2 793 aa18.13■□□□□ 0.49
GPC1-206ENST00000455111 IGKV6-21A0A0C4DH24 114 aa18.12■□□□□ 0.49
GPC1-206ENST00000455111 DENND3A2RUS2 1198 aa18.12■□□□□ 0.49
GPC1-206ENST00000455111 EML1O00423 815 aa18.12■□□□□ 0.49
GPC1-206ENST00000455111 GPR182O15218 404 aa18.12■□□□□ 0.49
GPC1-206ENST00000455111 PBX3P40426 434 aa18.12■□□□□ 0.49
GPC1-206ENST00000455111 NRIP1P48552 1158 aa18.12■□□□□ 0.49
GPC1-206ENST00000455111 SCRN1Q12765 414 aa18.12■□□□□ 0.49
GPC1-206ENST00000455111 EARS2Q5JPH6 523 aaKnown RBP18.12■□□□□ 0.49
GPC1-206ENST00000455111 LRCH2Q5VUJ6 765 aa18.12■□□□□ 0.49
GPC1-206ENST00000455111 RBM23Q86U06 439 aaKnown RBP18.12■□□□□ 0.49
GPC1-206ENST00000455111 ZNF598Q86UK7 904 aaKnown RBP18.12■□□□□ 0.49
GPC1-206ENST00000455111 BLIDQ8IZY5 108 aa18.12■□□□□ 0.49
GPC1-206ENST00000455111 EFHBQ8N7U6 833 aa18.12■□□□□ 0.49
GPC1-206ENST00000455111 BICD2Q8TD16 824 aa18.12■□□□□ 0.49
GPC1-206ENST00000455111 TM6SF1Q9BZW5 370 aa18.12■□□□□ 0.49
GPC1-206ENST00000455111 ELAC1Q9H777 363 aaKnown RBP18.12■□□□□ 0.49
GPC1-206ENST00000455111 BARX2Q9UMQ3 279 aaPredicted RBP18.12■□□□□ 0.49
GPC1-206ENST00000455111 KCNJ14Q9UNX9 436 aa18.12■□□□□ 0.49
GPC1-206ENST00000455111 SAMM50Q9Y512 469 aa18.12■□□□□ 0.49
GPC1-206ENST00000455111 PER2O15055 1255 aa18.11■□□□□ 0.49
GPC1-206ENST00000455111 MAGEB2O15479 319 aa18.11■□□□□ 0.49
GPC1-206ENST00000455111 EPB41L2O43491 1005 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms