RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 TFIP11Q9UBB9 837 aaKnown RBP31.25■■■□□ 2.59
SMARCC1-203ENST00000454240 FGBP02675 491 aa31.24■■■□□ 2.59
SMARCC1-203ENST00000454240 LONP1P36776 959 aaKnown RBP31.24■■■□□ 2.59
SMARCC1-203ENST00000454240 RARRES1P49788 294 aa31.24■■■□□ 2.59
SMARCC1-203ENST00000454240 TMEM62Q0P6H9 643 aa31.24■■■□□ 2.59
SMARCC1-203ENST00000454240 MKRN4PQ13434 485 aaPredicted RBP31.24■■■□□ 2.59
SMARCC1-203ENST00000454240 EXOC8Q8IYI6 725 aa31.24■■■□□ 2.59
SMARCC1-203ENST00000454240 JPH2Q9BR39 696 aaPredicted RBP31.24■■■□□ 2.59
SMARCC1-203ENST00000454240 DBR1Q9UK59 544 aaKnown RBP31.24■■■□□ 2.59
SMARCC1-203ENST00000454240 SRPRBQ9Y5M8 271 aaKnown RBP31.24■■■□□ 2.59
SMARCC1-203ENST00000454240 TRPV2Q9Y5S1 764 aa31.24■■■□□ 2.59
SMARCC1-203ENST00000454240 KDM3AQ9Y4C1 1321 aa31.24■■■□□ 2.59
SMARCC1-203ENST00000454240 MARCKSP29966 332 aaPredicted RBP31.23■■■□□ 2.59
SMARCC1-203ENST00000454240 RFC5P40937 340 aa31.23■■■□□ 2.59
SMARCC1-203ENST00000454240 LINC00301Q8NCQ3 95 aa31.23■■■□□ 2.59
SMARCC1-203ENST00000454240 CELF4Q9BZC1 486 aaKnown RBP31.23■■■□□ 2.59
SMARCC1-203ENST00000454240 FBXO2Q9UK22 296 aaPredicted RBP31.23■■■□□ 2.59
SMARCC1-203ENST00000454240 KIAA1024Q9UPX6 916 aa31.23■■■□□ 2.59
SMARCC1-203ENST00000454240 M0QZ92 97 aa31.22■■■□□ 2.59
SMARCC1-203ENST00000454240 DDIT3P35638 169 aa31.22■■■□□ 2.59
SMARCC1-203ENST00000454240 DRP2Q13474 957 aa31.22■■■□□ 2.59
SMARCC1-203ENST00000454240 HYIQ5T013 277 aa31.22■■■□□ 2.59
SMARCC1-203ENST00000454240 ATL3Q6DD88 541 aa31.22■■■□□ 2.59
SMARCC1-203ENST00000454240 SLC7A3Q8WY07 619 aa31.22■■■□□ 2.59
SMARCC1-203ENST00000454240 VTNP04004 478 aa31.21■■■□□ 2.59
SMARCC1-203ENST00000454240 POLGP54098 1239 aaPredicted RBP31.21■■■□□ 2.59
SMARCC1-203ENST00000454240 FOXD4L6Q3SYB3 417 aaPredicted RBP31.21■■■□□ 2.59
SMARCC1-203ENST00000454240 PLEKHG4Q58EX7 1191 aa31.21■■■□□ 2.59
SMARCC1-203ENST00000454240 FBXO47Q5MNV8 452 aa31.21■■■□□ 2.59
SMARCC1-203ENST00000454240 RASIP1Q5U651 963 aa31.21■■■□□ 2.59
SMARCC1-203ENST00000454240 FOXD4L3Q6VB84 417 aaPredicted RBP31.21■■■□□ 2.59
SMARCC1-203ENST00000454240 HERVK_113Q902F9 699 aa31.21■■■□□ 2.59
SMARCC1-203ENST00000454240 MAP7D2Q96T17 732 aa31.21■■■□□ 2.59
SMARCC1-203ENST00000454240 DDX19AQ9NUU7 478 aaKnown RBP31.21■■■□□ 2.59
SMARCC1-203ENST00000454240 DAXXQ9UER7 740 aaPredicted RBP31.21■■■□□ 2.59
SMARCC1-203ENST00000454240 AKT3Q9Y243 479 aa31.21■■■□□ 2.59
SMARCC1-203ENST00000454240 SQORQ9Y6N5 450 aa31.21■■■□□ 2.59
SMARCC1-203ENST00000454240 RBAK-RBAKDNI3L0D1 243 aa31.2■■■□□ 2.59
SMARCC1-203ENST00000454240 GPR32O75388 356 aa31.2■■■□□ 2.59
SMARCC1-203ENST00000454240 YEATS4O95619 227 aa31.2■■■□□ 2.59
SMARCC1-203ENST00000454240 DNM2P50570 870 aa31.2■■■□□ 2.59
SMARCC1-203ENST00000454240 CNKSR3Q6P9H4 555 aa31.2■■■□□ 2.59
SMARCC1-203ENST00000454240 OTOP2Q7RTS6 562 aa31.2■■■□□ 2.59
SMARCC1-203ENST00000454240 ZNF710Q8N1W2 664 aa31.2■■■□□ 2.59
SMARCC1-203ENST00000454240 CDHR5Q9HBB8 845 aa31.2■■■□□ 2.59
SMARCC1-203ENST00000454240 SLC26A4O43511 780 aa31.19■■■□□ 2.58
SMARCC1-203ENST00000454240 GAS2O43903 313 aaKnown RBP31.19■■■□□ 2.58
SMARCC1-203ENST00000454240 DGAT1O75907 488 aa31.19■■■□□ 2.58
SMARCC1-203ENST00000454240 LPIN1Q14693 890 aa31.19■■■□□ 2.58
SMARCC1-203ENST00000454240 STK38Q15208 465 aa31.19■■■□□ 2.58
SMARCC1-203ENST00000454240 TCTN1Q2MV58 587 aa31.19■■■□□ 2.58
SMARCC1-203ENST00000454240 CCDC43Q96MW1 224 aaKnown RBP31.19■■■□□ 2.58
SMARCC1-203ENST00000454240 PNMA5Q96PV4 448 aa31.19■■■□□ 2.58
SMARCC1-203ENST00000454240 CSRNP2Q9H175 543 aa31.19■■■□□ 2.58
SMARCC1-203ENST00000454240 TCHHQ07283 1943 aa31.18■■■□□ 2.58
SMARCC1-203ENST00000454240 GHRP10912 638 aa31.18■■■□□ 2.58
SMARCC1-203ENST00000454240 ACTN1P12814 892 aa31.18■■■□□ 2.58
SMARCC1-203ENST00000454240 ANP32AP39687 249 aaKnown RBP31.18■■■□□ 2.58
SMARCC1-203ENST00000454240 DNM1Q05193 864 aaKnown RBP31.18■■■□□ 2.58
SMARCC1-203ENST00000454240 EMC2Q15006 297 aa31.18■■■□□ 2.58
SMARCC1-203ENST00000454240 KIZQ2M2Z5 673 aa31.18■■■□□ 2.58
SMARCC1-203ENST00000454240 CABP7Q86V35 215 aa31.18■■■□□ 2.58
SMARCC1-203ENST00000454240 KCTD17Q8N5Z5 321 aa31.18■■■□□ 2.58
SMARCC1-203ENST00000454240 USP38Q8NB14 1042 aa31.18■■■□□ 2.58
SMARCC1-203ENST00000454240 DBF4BQ8NFT6 615 aa31.18■■■□□ 2.58
SMARCC1-203ENST00000454240 RNPC3Q96LT9 517 aaKnown RBP31.18■■■□□ 2.58
SMARCC1-203ENST00000454240 CLIC6Q96NY7 704 aa31.18■■■□□ 2.58
SMARCC1-203ENST00000454240 ADAMTS10Q9H324 1103 aa31.18■■■□□ 2.58
SMARCC1-203ENST00000454240 XPNPEP1Q9NQW7 623 aa31.18■■■□□ 2.58
SMARCC1-203ENST00000454240 SUCLA2Q9P2R7 463 aaPredicted RBP31.18■■■□□ 2.58
SMARCC1-203ENST00000454240 SPTLC2O15270 562 aa31.17■■■□□ 2.58
SMARCC1-203ENST00000454240 PPP6R2O75170 966 aa31.17■■■□□ 2.58
SMARCC1-203ENST00000454240 UBA7P41226 1012 aa31.17■■■□□ 2.58
SMARCC1-203ENST00000454240 GPC3P51654 580 aa31.17■■■□□ 2.58
SMARCC1-203ENST00000454240 CRYBB1P53674 252 aaPredicted RBP31.17■■■□□ 2.58
SMARCC1-203ENST00000454240 NLRP11P59045 1033 aaKnown RBP31.17■■■□□ 2.58
SMARCC1-203ENST00000454240 GRB10Q13322 594 aa31.17■■■□□ 2.58
SMARCC1-203ENST00000454240 KRI1Q8N9T8 703 aaKnown RBP31.17■■■□□ 2.58
SMARCC1-203ENST00000454240 MTRQ99707 1265 aa31.17■■■□□ 2.58
SMARCC1-203ENST00000454240 NT5C3AQ9H0P0 336 aa31.17■■■□□ 2.58
SMARCC1-203ENST00000454240 BMP2KQ9NSY1 1161 aaPredicted RBP31.17■■■□□ 2.58
SMARCC1-203ENST00000454240 CFAP45Q9UL16 551 aa31.17■■■□□ 2.58
SMARCC1-203ENST00000454240 DNM3Q9UQ16 869 aa31.17■■■□□ 2.58
SMARCC1-203ENST00000454240 MICAL3Q7RTP6 2002 aa31.17■■■□□ 2.58
SMARCC1-203ENST00000454240 TRIOBPQ9H2D6 2365 aa31.16■■■□□ 2.58
SMARCC1-203ENST00000454240 CDC42EP1Q00587 391 aa31.16■■■□□ 2.58
SMARCC1-203ENST00000454240 TSHZ1Q6ZSZ6 1077 aa31.16■■■□□ 2.58
SMARCC1-203ENST00000454240 TCP11Q8WWU5 503 aa31.16■■■□□ 2.58
SMARCC1-203ENST00000454240 SEPT8Q92599 483 aa31.16■■■□□ 2.58
SMARCC1-203ENST00000454240 TMEM143Q96AN5 459 aa31.16■■■□□ 2.58
SMARCC1-203ENST00000454240 PPP1R16BQ96T49 567 aa31.16■■■□□ 2.58
SMARCC1-203ENST00000454240 CCSER1Q9C0I3 900 aa31.16■■■□□ 2.58
SMARCC1-203ENST00000454240 AGO3Q9H9G7 860 aaKnown RBP31.16■■■□□ 2.58
SMARCC1-203ENST00000454240 ATP6V0A4Q9HBG4 840 aa31.16■■■□□ 2.58
SMARCC1-203ENST00000454240 CXXC1Q9P0U4 656 aaPredicted RBP31.16■■■□□ 2.58
SMARCC1-203ENST00000454240 GINS2Q9Y248 185 aa31.16■■■□□ 2.58
SMARCC1-203ENST00000454240 E9PMD0 336 aa31.15■■■□□ 2.58
SMARCC1-203ENST00000454240 BAIAP3O94812 1187 aa31.15■■■□□ 2.58
SMARCC1-203ENST00000454240 EYA4O95677 639 aa31.15■■■□□ 2.58
SMARCC1-203ENST00000454240 NUCB2P80303 420 aa31.15■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms