RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 ST3GAL5Q9UNP4 418 aa18.53■□□□□ 0.56
NCKIPSD-208ENST00000454134 AKT3Q9Y243 479 aa18.53■□□□□ 0.56
NCKIPSD-208ENST00000454134 SPTBN5Q9NRC6 3674 aaKnown RBP18.52■□□□□ 0.56
NCKIPSD-208ENST00000454134 EML1O00423 815 aa18.52■□□□□ 0.56
NCKIPSD-208ENST00000454134 CCNT1O60563 726 aaKnown RBP18.52■□□□□ 0.56
NCKIPSD-208ENST00000454134 EIF5BO60841 1220 aaKnown RBP18.52■□□□□ 0.56
NCKIPSD-208ENST00000454134 GATMP50440 423 aa18.52■□□□□ 0.56
NCKIPSD-208ENST00000454134 NLRP11P59045 1033 aaKnown RBP18.52■□□□□ 0.56
NCKIPSD-208ENST00000454134 NR5A1Q13285 461 aa18.52■□□□□ 0.56
NCKIPSD-208ENST00000454134 PAN2Q504Q3 1202 aaKnown RBP18.52■□□□□ 0.56
NCKIPSD-208ENST00000454134 FAM228AQ86W67 206 aa18.52■□□□□ 0.56
NCKIPSD-208ENST00000454134 LINC01465Q8N7H1 131 aa18.52■□□□□ 0.56
NCKIPSD-208ENST00000454134 BANK1Q8NDB2 785 aa18.52■□□□□ 0.56
NCKIPSD-208ENST00000454134 HLA-CQ95604 372 aa18.52■□□□□ 0.56
NCKIPSD-208ENST00000454134 MRPL38Q96DV4 380 aaKnown RBP18.52■□□□□ 0.56
NCKIPSD-208ENST00000454134 ADAM2Q99965 735 aa18.52■□□□□ 0.56
NCKIPSD-208ENST00000454134 SH2D3AQ9BRG2 576 aa18.52■□□□□ 0.56
NCKIPSD-208ENST00000454134 SEPT9Q9UHD8 586 aaPredicted RBP18.52■□□□□ 0.56
NCKIPSD-208ENST00000454134 XIRP2A4UGR9 3374 aa18.52■□□□□ 0.56
NCKIPSD-208ENST00000454134 GPR182O15218 404 aa18.51■□□□□ 0.55
NCKIPSD-208ENST00000454134 STBD1O95210 358 aa18.51■□□□□ 0.55
NCKIPSD-208ENST00000454134 BMP1P13497 986 aa18.51■□□□□ 0.55
NCKIPSD-208ENST00000454134 KRT2P35908 639 aa18.51■□□□□ 0.55
NCKIPSD-208ENST00000454134 TBC1D8BQ0IIM8 1120 aa18.51■□□□□ 0.55
NCKIPSD-208ENST00000454134 ST3GAL1Q11201 340 aa18.51■□□□□ 0.55
NCKIPSD-208ENST00000454134 TARBP2Q15633 366 aaKnown RBP18.51■□□□□ 0.55
NCKIPSD-208ENST00000454134 PTPROQ16827 1216 aa18.51■□□□□ 0.55
NCKIPSD-208ENST00000454134 AAK1Q2M2I8 961 aa18.51■□□□□ 0.55
NCKIPSD-208ENST00000454134 MTERF2Q49AM1 385 aa18.51■□□□□ 0.55
NCKIPSD-208ENST00000454134 PPP4R3AQ6IN85 833 aa18.51■□□□□ 0.55
NCKIPSD-208ENST00000454134 NECAB3Q96P71 396 aaPredicted RBP18.51■□□□□ 0.55
NCKIPSD-208ENST00000454134 MAP7D2Q96T17 732 aa18.51■□□□□ 0.55
NCKIPSD-208ENST00000454134 KCNMB3Q9NPA1 279 aa18.51■□□□□ 0.55
NCKIPSD-208ENST00000454134 VAV3Q9UKW4 847 aa18.51■□□□□ 0.55
NCKIPSD-208ENST00000454134 COG5Q9UP83 839 aa18.51■□□□□ 0.55
NCKIPSD-208ENST00000454134 MRPL42Q9Y6G3 142 aaKnown RBP18.51■□□□□ 0.55
NCKIPSD-208ENST00000454134 RALGAPA2Q2PPJ7 1873 aa18.51■□□□□ 0.55
NCKIPSD-208ENST00000454134 TCF20Q9UGU0 1960 aaKnown RBP18.51■□□□□ 0.55
NCKIPSD-208ENST00000454134 DENND3A2RUS2 1198 aa18.5■□□□□ 0.55
NCKIPSD-208ENST00000454134 STAG3L1P0CL83 205 aa18.5■□□□□ 0.55
NCKIPSD-208ENST00000454134 GCFC2P16383 781 aaKnown RBP18.5■□□□□ 0.55
NCKIPSD-208ENST00000454134 TMOD1P28289 359 aa18.5■□□□□ 0.55
NCKIPSD-208ENST00000454134 BMPR1AP36894 532 aa18.5■□□□□ 0.55
NCKIPSD-208ENST00000454134 SARSP49591 514 aaKnown RBP18.5■□□□□ 0.55
NCKIPSD-208ENST00000454134 DRP2Q13474 957 aa18.5■□□□□ 0.55
NCKIPSD-208ENST00000454134 XKR3Q5GH77 459 aa18.5■□□□□ 0.55
NCKIPSD-208ENST00000454134 CLP1Q92989 425 aaKnown RBP18.5■□□□□ 0.55
NCKIPSD-208ENST00000454134 TNFRSF25Q93038 417 aa18.5■□□□□ 0.55
NCKIPSD-208ENST00000454134 FAM20AQ96MK3 541 aa18.5■□□□□ 0.55
NCKIPSD-208ENST00000454134 NIFKQ9BYG3 293 aaKnown RBP18.5■□□□□ 0.55
NCKIPSD-208ENST00000454134 ADAMTS10Q9H324 1103 aa18.5■□□□□ 0.55
NCKIPSD-208ENST00000454134 LRFN2Q9ULH4 789 aa18.5■□□□□ 0.55
NCKIPSD-208ENST00000454134 TTC28Q96AY4 2481 aa18.49■□□□□ 0.55
NCKIPSD-208ENST00000454134 DDX11L8A8MPP1 907 aa18.49■□□□□ 0.55
NCKIPSD-208ENST00000454134 C5orf67F2Z3F1 127 aa18.49■□□□□ 0.55
NCKIPSD-208ENST00000454134 GRM6O15303 877 aa18.49■□□□□ 0.55
NCKIPSD-208ENST00000454134 CSPG5O95196 566 aa18.49■□□□□ 0.55
NCKIPSD-208ENST00000454134 PPP2R5CQ13362 524 aa18.49■□□□□ 0.55
NCKIPSD-208ENST00000454134 ODR4Q5SWX8 454 aa18.49■□□□□ 0.55
NCKIPSD-208ENST00000454134 POTEDQ86YR6 584 aa18.49■□□□□ 0.55
NCKIPSD-208ENST00000454134 CMTR2Q8IYT2 770 aaKnown RBP18.49■□□□□ 0.55
NCKIPSD-208ENST00000454134 HAS1Q92839 578 aa18.49■□□□□ 0.55
NCKIPSD-208ENST00000454134 UHRF1Q96T88 793 aaPredicted RBP18.49■□□□□ 0.55
NCKIPSD-208ENST00000454134 RGS18Q9NS28 235 aa18.49■□□□□ 0.55
NCKIPSD-208ENST00000454134 PCDHB7Q9Y5E2 793 aa18.49■□□□□ 0.55
NCKIPSD-208ENST00000454134 C9IYK1 514 aa18.48■□□□□ 0.55
NCKIPSD-208ENST00000454134 MARCH6O60337 910 aa18.48■□□□□ 0.55
NCKIPSD-208ENST00000454134 RB1P06400 928 aa18.48■□□□□ 0.55
NCKIPSD-208ENST00000454134 GPC3P51654 580 aa18.48■□□□□ 0.55
NCKIPSD-208ENST00000454134 PSMC5P62195 406 aa18.48■□□□□ 0.55
NCKIPSD-208ENST00000454134 PLA2G4FQ68DD2 849 aa18.48■□□□□ 0.55
NCKIPSD-208ENST00000454134 SLC24A5Q71RS6 500 aa18.48■□□□□ 0.55
NCKIPSD-208ENST00000454134 SCLT1Q96NL6 688 aa18.48■□□□□ 0.55
NCKIPSD-208ENST00000454134 CEP89Q96ST8 783 aa18.48■□□□□ 0.55
NCKIPSD-208ENST00000454134 C11orf84Q9BUA3 381 aaPredicted RBP18.48■□□□□ 0.55
NCKIPSD-208ENST00000454134 BRMS1Q9HCU9 246 aa18.48■□□□□ 0.55
NCKIPSD-208ENST00000454134 RWDD3Q9Y3V2 267 aa18.48■□□□□ 0.55
NCKIPSD-208ENST00000454134 BTBD18B2RXH4 712 aa18.47■□□□□ 0.55
NCKIPSD-208ENST00000454134 TNFRSF10AO00220 468 aa18.47■□□□□ 0.55
NCKIPSD-208ENST00000454134 MMP1P03956 469 aa18.47■□□□□ 0.55
NCKIPSD-208ENST00000454134 FGFR4P22455 802 aa18.47■□□□□ 0.55
NCKIPSD-208ENST00000454134 EIF4BP23588 611 aaKnown RBP18.47■□□□□ 0.55
NCKIPSD-208ENST00000454134 DSC3Q14574 896 aa18.47■□□□□ 0.55
NCKIPSD-208ENST00000454134 C8orf34Q49A92 452 aa18.47■□□□□ 0.55
NCKIPSD-208ENST00000454134 TIGD5Q53EQ6 642 aa18.47■□□□□ 0.55
NCKIPSD-208ENST00000454134 TCEAL5Q5H9L2 206 aa18.47■□□□□ 0.55
NCKIPSD-208ENST00000454134 FAM102BQ5T8I3 360 aa18.47■□□□□ 0.55
NCKIPSD-208ENST00000454134 ANO5Q75V66 913 aa18.47■□□□□ 0.55
NCKIPSD-208ENST00000454134 DIS3L2Q8IYB7 885 aaKnown RBP18.47■□□□□ 0.55
NCKIPSD-208ENST00000454134 NLRP7Q8WX94 980 aa18.47■□□□□ 0.55
NCKIPSD-208ENST00000454134 NAP1L4Q99733 375 aaKnown RBP18.47■□□□□ 0.55
NCKIPSD-208ENST00000454134 UBE2ZQ9H832 354 aaPredicted RBP18.47■□□□□ 0.55
NCKIPSD-208ENST00000454134 ALG13Q9NP73 1137 aaKnown RBP18.47■□□□□ 0.55
NCKIPSD-208ENST00000454134 C1orf112Q9NSG2 853 aa18.47■□□□□ 0.55
NCKIPSD-208ENST00000454134 WRAP73Q9P2S5 460 aaPredicted RBP18.47■□□□□ 0.55
NCKIPSD-208ENST00000454134 LIMCH1Q9UPQ0 1083 aa18.47■□□□□ 0.55
NCKIPSD-208ENST00000454134 KIAA1671Q9BY89 1806 aa18.46■□□□□ 0.55
NCKIPSD-208ENST00000454134 WNT7AO00755 349 aa18.46■□□□□ 0.55
NCKIPSD-208ENST00000454134 TBX3O15119 743 aa18.46■□□□□ 0.55
NCKIPSD-208ENST00000454134 CSDE1O75534 798 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms