RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 NAALADL2Q58DX5 795 aa13.24□□□□□ -0.29
LINC00339-205ENST00000452322 PADI6Q6TGC4 694 aa13.24□□□□□ -0.29
LINC00339-205ENST00000452322 LINC01465Q8N7H1 131 aa13.24□□□□□ -0.29
LINC00339-205ENST00000452322 PDILTQ8N807 584 aa13.24□□□□□ -0.29
LINC00339-205ENST00000452322 SYT2Q8N9I0 419 aaPredicted RBP13.24□□□□□ -0.29
LINC00339-205ENST00000452322 LRRC15Q8TF66 581 aa13.24□□□□□ -0.29
LINC00339-205ENST00000452322 LARP4BQ92615 738 aaKnown RBP13.24□□□□□ -0.29
LINC00339-205ENST00000452322 RAD54LQ92698 747 aa13.24□□□□□ -0.29
LINC00339-205ENST00000452322 ZBTB10Q96DT7 871 aa13.24□□□□□ -0.29
LINC00339-205ENST00000452322 PDLIM7Q9NR12 457 aa13.24□□□□□ -0.29
LINC00339-205ENST00000452322 KCNH3Q9ULD8 1083 aa13.24□□□□□ -0.29
LINC00339-205ENST00000452322 A0A1B0GVL5 298 aa13.23□□□□□ -0.29
LINC00339-205ENST00000452322 CAND2O75155 1236 aa13.23□□□□□ -0.29
LINC00339-205ENST00000452322 TMOD1P28289 359 aa13.23□□□□□ -0.29
LINC00339-205ENST00000452322 SLC12A3P55017 1021 aa13.23□□□□□ -0.29
LINC00339-205ENST00000452322 RBL2Q08999 1139 aa13.23□□□□□ -0.29
LINC00339-205ENST00000452322 EMC2Q15006 297 aa13.23□□□□□ -0.29
LINC00339-205ENST00000452322 TRIM71Q2Q1W2 868 aaKnown RBP13.23□□□□□ -0.29
LINC00339-205ENST00000452322 EFCAB12Q6NXP0 572 aa13.23□□□□□ -0.29
LINC00339-205ENST00000452322 RUFY4Q6ZNE9 571 aa13.23□□□□□ -0.29
LINC00339-205ENST00000452322 RPAINQ86UA6 219 aa13.23□□□□□ -0.29
LINC00339-205ENST00000452322 CCDC155Q8N6L0 562 aa13.23□□□□□ -0.29
LINC00339-205ENST00000452322 FSIP1Q8NA03 581 aa13.23□□□□□ -0.29
LINC00339-205ENST00000452322 IQUBQ8NA54 791 aa13.23□□□□□ -0.29
LINC00339-205ENST00000452322 CAGE1Q8TC20 777 aa13.23□□□□□ -0.29
LINC00339-205ENST00000452322 DHX38Q92620 1227 aaKnown RBP13.23□□□□□ -0.29
LINC00339-205ENST00000452322 MTRQ99707 1265 aa13.23□□□□□ -0.29
LINC00339-205ENST00000452322 PANK2Q9BZ23 570 aa13.23□□□□□ -0.29
LINC00339-205ENST00000452322 CUEDC2Q9H467 287 aa13.23□□□□□ -0.29
LINC00339-205ENST00000452322 ATP6V0A4Q9HBG4 840 aa13.23□□□□□ -0.29
LINC00339-205ENST00000452322 KCND2Q9NZV8 630 aa13.23□□□□□ -0.29
LINC00339-205ENST00000452322 TBX21Q9UL17 535 aa13.23□□□□□ -0.29
LINC00339-205ENST00000452322 PITPNM1O00562 1244 aa13.22□□□□□ -0.29
LINC00339-205ENST00000452322 POLR2DO15514 142 aaKnown RBP13.22□□□□□ -0.29
LINC00339-205ENST00000452322 EVI5O60447 810 aa13.22□□□□□ -0.29
LINC00339-205ENST00000452322 USO1O60763 962 aaKnown RBP13.22□□□□□ -0.29
LINC00339-205ENST00000452322 CYP11B2P19099 503 aa13.22□□□□□ -0.29
LINC00339-205ENST00000452322 CLCN3P51790 818 aa13.22□□□□□ -0.29
LINC00339-205ENST00000452322 NDUFA8P51970 172 aa13.22□□□□□ -0.29
LINC00339-205ENST00000452322 BFSP2Q13515 415 aa13.22□□□□□ -0.29
LINC00339-205ENST00000452322 RINT1Q6NUQ1 792 aa13.22□□□□□ -0.29
LINC00339-205ENST00000452322 RSPH3Q86UC2 560 aa13.22□□□□□ -0.29
LINC00339-205ENST00000452322 NME8Q8N427 588 aa13.22□□□□□ -0.29
LINC00339-205ENST00000452322 LRRC71Q8N4P6 559 aa13.22□□□□□ -0.29
LINC00339-205ENST00000452322 METTL13Q8N6R0 699 aa13.22□□□□□ -0.29
LINC00339-205ENST00000452322 MCPH1Q8NEM0 835 aa13.22□□□□□ -0.29
LINC00339-205ENST00000452322 TCP11Q8WWU5 503 aa13.22□□□□□ -0.29
LINC00339-205ENST00000452322 WNT8BQ93098 351 aa13.22□□□□□ -0.29
LINC00339-205ENST00000452322 DHX58Q96C10 678 aa13.22□□□□□ -0.29
LINC00339-205ENST00000452322 MAP7D2Q96T17 732 aa13.22□□□□□ -0.29
LINC00339-205ENST00000452322 GOLPH3LQ9H4A5 285 aa13.22□□□□□ -0.29
LINC00339-205ENST00000452322 SUGCTQ9HAC7 445 aa13.22□□□□□ -0.29
LINC00339-205ENST00000452322 MAGEF1Q9HAY2 307 aa13.22□□□□□ -0.29
LINC00339-205ENST00000452322 XPNPEP1Q9NQW7 623 aa13.22□□□□□ -0.29
LINC00339-205ENST00000452322 TMEM39AQ9NV64 488 aa13.22□□□□□ -0.29
LINC00339-205ENST00000452322 GOLGA6L22H0YM25 854 aa13.21□□□□□ -0.29
LINC00339-205ENST00000452322 KIAA0355O15063 1070 aa13.21□□□□□ -0.29
LINC00339-205ENST00000452322 PRPF40AO75400 957 aaKnown RBP13.21□□□□□ -0.29
LINC00339-205ENST00000452322 CAPN15O75808 1086 aa13.21□□□□□ -0.29
LINC00339-205ENST00000452322 SSBP05455 408 aaKnown RBP eCLIP13.21□□□□□ -0.29
LINC00339-205ENST00000452322 GUCY2CP25092 1073 aa13.21□□□□□ -0.29
LINC00339-205ENST00000452322 SYKP43405 635 aa13.21□□□□□ -0.29
LINC00339-205ENST00000452322 DNM2P50570 870 aa13.21□□□□□ -0.29
LINC00339-205ENST00000452322 UBE2HP62256 183 aa13.21□□□□□ -0.29
LINC00339-205ENST00000452322 MKRN4PQ13434 485 aaPredicted RBP13.21□□□□□ -0.29
LINC00339-205ENST00000452322 MCM6Q14566 821 aa13.21□□□□□ -0.29
LINC00339-205ENST00000452322 TPRNQ4KMQ1 711 aa13.21□□□□□ -0.29
LINC00339-205ENST00000452322 IER5Q5VY09 327 aa13.21□□□□□ -0.29
LINC00339-205ENST00000452322 C1orf186Q6ZWK4 172 aa13.21□□□□□ -0.29
LINC00339-205ENST00000452322 SV2BQ7L1I2 683 aa13.21□□□□□ -0.29
LINC00339-205ENST00000452322 C7orf61Q8IZ16 206 aa13.21□□□□□ -0.29
LINC00339-205ENST00000452322 KIAA0319LQ8IZA0 1049 aa13.21□□□□□ -0.29
LINC00339-205ENST00000452322 ZNF710Q8N1W2 664 aa13.21□□□□□ -0.29
LINC00339-205ENST00000452322 DNAJB3Q8WWF6 145 aa13.21□□□□□ -0.29
LINC00339-205ENST00000452322 DPF3Q92784 378 aa13.21□□□□□ -0.29
LINC00339-205ENST00000452322 NOC4LQ9BVI4 516 aaKnown RBP13.21□□□□□ -0.29
LINC00339-205ENST00000452322 RUSC1Q9BVN2 902 aa13.21□□□□□ -0.29
LINC00339-205ENST00000452322 TIPINQ9BVW5 301 aa13.21□□□□□ -0.29
LINC00339-205ENST00000452322 FAM49AQ9H0Q0 323 aaPredicted RBP13.21□□□□□ -0.29
LINC00339-205ENST00000452322 TNMDQ9H2S6 317 aa13.21□□□□□ -0.29
LINC00339-205ENST00000452322 HIPK3Q9H422 1215 aa13.21□□□□□ -0.29
LINC00339-205ENST00000452322 PRDM5Q9NQX1 630 aaPredicted RBP13.21□□□□□ -0.29
LINC00339-205ENST00000452322 BMP2KQ9NSY1 1161 aaPredicted RBP13.21□□□□□ -0.29
LINC00339-205ENST00000452322 USP25Q9UHP3 1055 aa13.21□□□□□ -0.29
LINC00339-205ENST00000452322 EVPLQ92817 2033 aa13.21□□□□□ -0.29
LINC00339-205ENST00000452322 GADD45BO75293 160 aaPredicted RBP13.2□□□□□ -0.3
LINC00339-205ENST00000452322 CKBP12277 381 aa13.2□□□□□ -0.3
LINC00339-205ENST00000452322 THPOP40225 353 aa13.2□□□□□ -0.3
LINC00339-205ENST00000452322 DRP2Q13474 957 aa13.2□□□□□ -0.3
LINC00339-205ENST00000452322 SH3RF1Q7Z6J0 888 aa13.2□□□□□ -0.3
LINC00339-205ENST00000452322 GPBP1Q86WP2 473 aa13.2□□□□□ -0.3
LINC00339-205ENST00000452322 CEP57L1Q8IYX8 460 aa13.2□□□□□ -0.3
LINC00339-205ENST00000452322 PSPC1Q8WXF1 523 aaKnown RBP13.2□□□□□ -0.3
LINC00339-205ENST00000452322 TMEM143Q96AN5 459 aa13.2□□□□□ -0.3
LINC00339-205ENST00000452322 KBTBD4Q9NVX7 518 aa13.2□□□□□ -0.3
LINC00339-205ENST00000452322 SUCLA2Q9P2R7 463 aaPredicted RBP13.2□□□□□ -0.3
LINC00339-205ENST00000452322 PRKAG2Q9UGJ0 569 aa13.2□□□□□ -0.3
LINC00339-205ENST00000452322 AKT3Q9Y243 479 aa13.2□□□□□ -0.3
LINC00339-205ENST00000452322 TANC1Q9C0D5 1861 aa13.2□□□□□ -0.3
LINC00339-205ENST00000452322 TRIM43BA6NCK2 446 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms