RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 Q4G0T1 1027 aa24.35■■□□□ 1.49
C9orf3-208ENST00000451893 EFCAB12Q6NXP0 572 aa24.35■■□□□ 1.49
C9orf3-208ENST00000451893 CMTR2Q8IYT2 770 aaKnown RBP24.35■■□□□ 1.49
C9orf3-208ENST00000451893 SLC5A5Q92911 643 aa24.35■■□□□ 1.49
C9orf3-208ENST00000451893 TMX3Q96JJ7 454 aa24.35■■□□□ 1.49
C9orf3-208ENST00000451893 UNC45AQ9H3U1 944 aa24.35■■□□□ 1.49
C9orf3-208ENST00000451893 BRMS1Q9HCU9 246 aa24.35■■□□□ 1.49
C9orf3-208ENST00000451893 SEPT9Q9UHD8 586 aaPredicted RBP24.35■■□□□ 1.49
C9orf3-208ENST00000451893 NOC2LQ9Y3T9 749 aaKnown RBP24.35■■□□□ 1.49
C9orf3-208ENST00000451893 KCNA5P22460 613 aa24.34■■□□□ 1.49
C9orf3-208ENST00000451893 CLCN3P51790 818 aa24.34■■□□□ 1.49
C9orf3-208ENST00000451893 TBC1D8BQ0IIM8 1120 aa24.34■■□□□ 1.49
C9orf3-208ENST00000451893 FAM43BQ6ZT52 329 aaPredicted RBP24.34■■□□□ 1.49
C9orf3-208ENST00000451893 LINC01599Q8WXQ3 324 aa24.34■■□□□ 1.49
C9orf3-208ENST00000451893 GJA10Q969M2 543 aa24.34■■□□□ 1.49
C9orf3-208ENST00000451893 NECAB3Q96P71 396 aaPredicted RBP24.34■■□□□ 1.49
C9orf3-208ENST00000451893 NSUN3Q9H649 340 aaKnown RBP24.34■■□□□ 1.49
C9orf3-208ENST00000451893 C1orf112Q9NSG2 853 aa24.34■■□□□ 1.49
C9orf3-208ENST00000451893 CIZ1Q9ULV3 898 aaPredicted RBP24.34■■□□□ 1.49
C9orf3-208ENST00000451893 ST3GAL5Q9UNP4 418 aa24.34■■□□□ 1.49
C9orf3-208ENST00000451893 ZBTB42B2RXF5 422 aa24.33■■□□□ 1.49
C9orf3-208ENST00000451893 SARSP49591 514 aaKnown RBP24.33■■□□□ 1.49
C9orf3-208ENST00000451893 LRRC71Q8N4P6 559 aa24.33■■□□□ 1.49
C9orf3-208ENST00000451893 RDM1Q8NG50 284 aa24.33■■□□□ 1.49
C9orf3-208ENST00000451893 ADAM2Q99965 735 aa24.33■■□□□ 1.49
C9orf3-208ENST00000451893 LMAN2LQ9H0V9 348 aa24.33■■□□□ 1.49
C9orf3-208ENST00000451893 ERVK-5Q9HDB9 667 aa24.33■■□□□ 1.49
C9orf3-208ENST00000451893 TPCN1Q9ULQ1 816 aa24.33■■□□□ 1.49
C9orf3-208ENST00000451893 VCANP13611 3396 aa24.33■■□□□ 1.49
C9orf3-208ENST00000451893 STK36Q9NRP7 1315 aa24.33■■□□□ 1.48
C9orf3-208ENST00000451893 PFKFB2O60825 505 aa24.32■■□□□ 1.48
C9orf3-208ENST00000451893 ZSCAN20P17040 1043 aaPredicted RBP24.32■■□□□ 1.48
C9orf3-208ENST00000451893 MOXD1Q6UVY6 613 aa24.32■■□□□ 1.48
C9orf3-208ENST00000451893 RTN4RL1Q86UN2 441 aaPredicted RBP24.32■■□□□ 1.48
C9orf3-208ENST00000451893 PPP2R3CQ969Q6 453 aa24.32■■□□□ 1.48
C9orf3-208ENST00000451893 ZNF689Q96CS4 500 aaPredicted RBP24.32■■□□□ 1.48
C9orf3-208ENST00000451893 NAP1L4Q99733 375 aaKnown RBP24.32■■□□□ 1.48
C9orf3-208ENST00000451893 PLVAPQ9BX97 442 aa24.32■■□□□ 1.48
C9orf3-208ENST00000451893 CDHR5Q9HBB8 845 aa24.32■■□□□ 1.48
C9orf3-208ENST00000451893 ORC3Q9UBD5 711 aaPredicted RBP24.32■■□□□ 1.48
C9orf3-208ENST00000451893 C5orf67F2Z3F1 127 aa24.31■■□□□ 1.48
C9orf3-208ENST00000451893 NLRP11P59045 1033 aaKnown RBP24.31■■□□□ 1.48
C9orf3-208ENST00000451893 MTERF2Q49AM1 385 aa24.31■■□□□ 1.48
C9orf3-208ENST00000451893 TCEAL5Q5H9L2 206 aa24.31■■□□□ 1.48
C9orf3-208ENST00000451893 NEK8Q86SG6 692 aa24.31■■□□□ 1.48
C9orf3-208ENST00000451893 ZNF710Q8N1W2 664 aa24.31■■□□□ 1.48
C9orf3-208ENST00000451893 NLRP7Q8WX94 980 aa24.31■■□□□ 1.48
C9orf3-208ENST00000451893 TTC28Q96AY4 2481 aa24.31■■□□□ 1.48
C9orf3-208ENST00000451893 TMX1Q9H3N1 280 aa24.31■■□□□ 1.48
C9orf3-208ENST00000451893 MRPL42Q9Y6G3 142 aaKnown RBP24.31■■□□□ 1.48
C9orf3-208ENST00000451893 CYP3A7-CYP3A51PA0A087WV96 503 aa24.3■■□□□ 1.48
C9orf3-208ENST00000451893 CCNT1O60563 726 aaKnown RBP24.3■■□□□ 1.48
C9orf3-208ENST00000451893 PSMD10O75832 226 aa24.3■■□□□ 1.48
C9orf3-208ENST00000451893 CYP3A7P24462 503 aa24.3■■□□□ 1.48
C9orf3-208ENST00000451893 DNM2P50570 870 aa24.3■■□□□ 1.48
C9orf3-208ENST00000451893 UGCGQ16739 394 aa24.3■■□□□ 1.48
C9orf3-208ENST00000451893 PIK3AP1Q6ZUJ8 805 aa24.3■■□□□ 1.48
C9orf3-208ENST00000451893 SLC24A5Q71RS6 500 aa24.3■■□□□ 1.48
C9orf3-208ENST00000451893 TMEM40Q8WWA1 233 aa24.3■■□□□ 1.48
C9orf3-208ENST00000451893 CLP1Q92989 425 aaKnown RBP24.3■■□□□ 1.48
C9orf3-208ENST00000451893 PHF20Q9BVI0 1012 aa24.3■■□□□ 1.48
C9orf3-208ENST00000451893 RC3H2Q9HBD1 1191 aaKnown RBP24.3■■□□□ 1.48
C9orf3-208ENST00000451893 ATP6V0A4Q9HBG4 840 aa24.3■■□□□ 1.48
C9orf3-208ENST00000451893 AAASQ9NRG9 546 aa24.3■■□□□ 1.48
C9orf3-208ENST00000451893 KIAA1671Q9BY89 1806 aa24.29■■□□□ 1.48
C9orf3-208ENST00000451893 TBKBP1A7MCY6 615 aa24.29■■□□□ 1.48
C9orf3-208ENST00000451893 ZNF862O60290 1169 aa24.29■■□□□ 1.48
C9orf3-208ENST00000451893 DKC1O60832 514 aaKnown RBP eCLIP24.29■■□□□ 1.486e-6■■■□□ 15
C9orf3-208ENST00000451893 GCFC2P16383 781 aaKnown RBP24.29■■□□□ 1.48
C9orf3-208ENST00000451893 TRIM29Q14134 588 aa24.29■■□□□ 1.48
C9orf3-208ENST00000451893 XKR3Q5GH77 459 aa24.29■■□□□ 1.48
C9orf3-208ENST00000451893 FAM228AQ86W67 206 aa24.29■■□□□ 1.48
C9orf3-208ENST00000451893 ZNF668Q96K58 619 aaPredicted RBP24.29■■□□□ 1.48
C9orf3-208ENST00000451893 ALG13Q9NP73 1137 aaKnown RBP24.29■■□□□ 1.48
C9orf3-208ENST00000451893 RGS18Q9NS28 235 aa24.29■■□□□ 1.48
C9orf3-208ENST00000451893 CLDND1Q9NY35 253 aa24.29■■□□□ 1.48
C9orf3-208ENST00000451893 CHMP5Q9NZZ3 219 aa24.29■■□□□ 1.48
C9orf3-208ENST00000451893 FAM50BQ9Y247 325 aa24.29■■□□□ 1.48
C9orf3-208ENST00000451893 PCDHB12Q9Y5F1 795 aa24.29■■□□□ 1.48
C9orf3-208ENST00000451893 DDX11L8A8MPP1 907 aa24.28■■□□□ 1.48
C9orf3-208ENST00000451893 M0R2N6 131 aa24.28■■□□□ 1.48
C9orf3-208ENST00000451893 GRM6O15303 877 aa24.28■■□□□ 1.48
C9orf3-208ENST00000451893 NCK2O43639 380 aa24.28■■□□□ 1.48
C9orf3-208ENST00000451893 ABI1Q8IZP0 508 aa24.28■■□□□ 1.48
C9orf3-208ENST00000451893 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.28■■□□□ 1.48
C9orf3-208ENST00000451893 BRWD1Q9NSI6 2320 aa24.28■■□□□ 1.48
C9orf3-208ENST00000451893 MGEA5O60502 916 aa24.27■■□□□ 1.48
C9orf3-208ENST00000451893 GPR32O75388 356 aa24.27■■□□□ 1.48
C9orf3-208ENST00000451893 BAG4O95429 457 aaKnown RBP24.27■■□□□ 1.48
C9orf3-208ENST00000451893 DDIT3P35638 169 aa24.27■■□□□ 1.48
C9orf3-208ENST00000451893 KRT2P35908 639 aa24.27■■□□□ 1.48
C9orf3-208ENST00000451893 GATMP50440 423 aa24.27■■□□□ 1.48
C9orf3-208ENST00000451893 LEXMQ3ZCV2 418 aa24.27■■□□□ 1.48
C9orf3-208ENST00000451893 NAALADL2Q58DX5 795 aa24.27■■□□□ 1.48
C9orf3-208ENST00000451893 P2RX5Q93086 422 aa24.27■■□□□ 1.48
C9orf3-208ENST00000451893 IGFLR1Q9H665 355 aa24.27■■□□□ 1.48
C9orf3-208ENST00000451893 H3BQ06 376 aaPredicted RBP24.26■■□□□ 1.47
C9orf3-208ENST00000451893 SLC37A4O43826 429 aa24.26■■□□□ 1.47
C9orf3-208ENST00000451893 EDIL3O43854 480 aa24.26■■□□□ 1.47
C9orf3-208ENST00000451893 MMP1P03956 469 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms