RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 PTGISQ16647 500 aa12.32□□□□□ -0.44
SYVN1-204ENST00000449943 FBXO11Q86XK2 927 aa12.32□□□□□ -0.44
SYVN1-204ENST00000449943 ZNF473Q8WTR7 871 aaKnown RBP12.32□□□□□ -0.44
SYVN1-204ENST00000449943 SLC35C1Q96A29 364 aa12.32□□□□□ -0.44
SYVN1-204ENST00000449943 GJD4Q96KN9 370 aaPredicted RBP12.32□□□□□ -0.44
SYVN1-204ENST00000449943 DBNDD1Q9H9R9 158 aa12.32□□□□□ -0.44
SYVN1-204ENST00000449943 ARHGEF10LQ9HCE6 1279 aa12.32□□□□□ -0.44
SYVN1-204ENST00000449943 HMGB1P1B2RPK0 211 aaPredicted RBP12.32□□□□□ -0.44
SYVN1-204ENST00000449943 ZBTB39O15060 712 aa12.32□□□□□ -0.44
SYVN1-204ENST00000449943 MSH4O15457 936 aa12.32□□□□□ -0.44
SYVN1-204ENST00000449943 MDH1P40925 334 aaKnown RBP12.32□□□□□ -0.44
SYVN1-204ENST00000449943 COG2Q14746 738 aa12.32□□□□□ -0.44
SYVN1-204ENST00000449943 ZFYVE27Q5T4F4 411 aa12.32□□□□□ -0.44
SYVN1-204ENST00000449943 MSL1Q68DK7 614 aa12.32□□□□□ -0.44
SYVN1-204ENST00000449943 APOBEC3HQ6NTF7 200 aaKnown RBP12.32□□□□□ -0.44
SYVN1-204ENST00000449943 ZC3H3Q8IXZ2 948 aaKnown RBP12.32□□□□□ -0.44
SYVN1-204ENST00000449943 RDH13Q8NBN7 331 aa12.32□□□□□ -0.44
SYVN1-204ENST00000449943 BTAF1O14981 1849 aa12.32□□□□□ -0.44
SYVN1-204ENST00000449943 DDTLA6NHG4 134 aaPredicted RBP12.32□□□□□ -0.44
SYVN1-204ENST00000449943 EML1O00423 815 aa12.32□□□□□ -0.44
SYVN1-204ENST00000449943 GALCP54803 685 aa12.32□□□□□ -0.44
SYVN1-204ENST00000449943 ARHGAP44Q17R89 818 aa12.32□□□□□ -0.44
SYVN1-204ENST00000449943 ICE2Q659A1 982 aa12.32□□□□□ -0.44
SYVN1-204ENST00000449943 NLRP14Q86W24 1093 aa12.32□□□□□ -0.44
SYVN1-204ENST00000449943 FAM186BQ8IYM0 893 aa12.32□□□□□ -0.44
SYVN1-204ENST00000449943 EIF2AK1Q9BQI3 630 aaKnown RBP12.32□□□□□ -0.44
SYVN1-204ENST00000449943 TRIM51Q9BSJ1 452 aa12.32□□□□□ -0.44
SYVN1-204ENST00000449943 SIX2Q9NPC8 291 aa12.32□□□□□ -0.44
SYVN1-204ENST00000449943 TMEM59LQ9UK28 342 aa12.32□□□□□ -0.44
SYVN1-204ENST00000449943 EVI5O60447 810 aa12.31□□□□□ -0.44
SYVN1-204ENST00000449943 FGGP02679 453 aa12.31□□□□□ -0.44
SYVN1-204ENST00000449943 TMOD1P28289 359 aa12.31□□□□□ -0.44
SYVN1-204ENST00000449943 ECHS1P30084 290 aa12.31□□□□□ -0.44
SYVN1-204ENST00000449943 AP3B2Q13367 1082 aa12.31□□□□□ -0.44
SYVN1-204ENST00000449943 CUL1Q13616 776 aa12.31□□□□□ -0.44
SYVN1-204ENST00000449943 UAP1Q16222 522 aaPredicted RBP12.31□□□□□ -0.44
SYVN1-204ENST00000449943 WDR78Q5VTH9 848 aa12.31□□□□□ -0.44
SYVN1-204ENST00000449943 ACTRT1Q8TDG2 376 aa12.31□□□□□ -0.44
SYVN1-204ENST00000449943 SCFD2Q8WU76 684 aa12.31□□□□□ -0.44
SYVN1-204ENST00000449943 LMBR1Q8WVP7 490 aa12.31□□□□□ -0.44
SYVN1-204ENST00000449943 LRRC45Q96CN5 670 aa12.31□□□□□ -0.44
SYVN1-204ENST00000449943 TMBIM4Q9HC24 238 aa12.31□□□□□ -0.44
SYVN1-204ENST00000449943 SPATA31A6Q5VVP1 1343 aa12.31□□□□□ -0.44
SYVN1-204ENST00000449943 CYP3A7-CYP3A51PA0A087WV96 503 aa12.31□□□□□ -0.44
SYVN1-204ENST00000449943 TRIM49P0CI25 452 aa12.31□□□□□ -0.44
SYVN1-204ENST00000449943 TRIM49CP0CI26 452 aa12.31□□□□□ -0.44
SYVN1-204ENST00000449943 CYP3A7P24462 503 aa12.31□□□□□ -0.44
SYVN1-204ENST00000449943 STAT1P42224 750 aa12.31□□□□□ -0.44
SYVN1-204ENST00000449943 ITGB3BPQ13352 177 aaPredicted RBP12.31□□□□□ -0.44
SYVN1-204ENST00000449943 DPY19L2P1Q6NXN4 242 aa12.31□□□□□ -0.44
SYVN1-204ENST00000449943 CCT8L2Q96SF2 557 aa12.31□□□□□ -0.44
SYVN1-204ENST00000449943 METTL14Q9HCE5 456 aaKnown RBP12.31□□□□□ -0.44
SYVN1-204ENST00000449943 GOPCQ9HD26 462 aa12.31□□□□□ -0.44
SYVN1-204ENST00000449943 A6NNZ2 444 aa12.31□□□□□ -0.44
SYVN1-204ENST00000449943 F5H6K3 240 aa12.31□□□□□ -0.44
SYVN1-204ENST00000449943 CRKP46108 304 aa12.31□□□□□ -0.44
SYVN1-204ENST00000449943 KLRC3Q07444 240 aa12.31□□□□□ -0.44
SYVN1-204ENST00000449943 ZNF211Q13398 564 aaPredicted RBP12.31□□□□□ -0.44
SYVN1-204ENST00000449943 TUBB8Q3ZCM7 444 aa12.31□□□□□ -0.44
SYVN1-204ENST00000449943 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.31□□□□□ -0.445e-9■■■■■ 51.3
SYVN1-204ENST00000449943 AMFRQ9UKV5 643 aa12.31□□□□□ -0.44
SYVN1-204ENST00000449943 LRRN2O75325 713 aa12.3□□□□□ -0.44
SYVN1-204ENST00000449943 IFT88Q13099 833 aa12.3□□□□□ -0.44
SYVN1-204ENST00000449943 EPM2AIP1Q7L775 607 aaPredicted RBP12.3□□□□□ -0.44
SYVN1-204ENST00000449943 CD302Q8IX05 232 aa12.3□□□□□ -0.44
SYVN1-204ENST00000449943 LNX1Q8TBB1 728 aaPredicted RBP12.3□□□□□ -0.44
SYVN1-204ENST00000449943 DCAF4Q8WV16 495 aa12.3□□□□□ -0.44
SYVN1-204ENST00000449943 LENG9Q96B70 501 aa12.3□□□□□ -0.44
SYVN1-204ENST00000449943 CCDC17Q96LX7 622 aa12.3□□□□□ -0.44
SYVN1-204ENST00000449943 MYO1FO00160 1098 aa12.3□□□□□ -0.44
SYVN1-204ENST00000449943 ZNF844Q08AG5 666 aa12.3□□□□□ -0.44
SYVN1-204ENST00000449943 IFFO1Q0D2I5 559 aa12.3□□□□□ -0.44
SYVN1-204ENST00000449943 CETN1Q12798 172 aa12.3□□□□□ -0.44
SYVN1-204ENST00000449943 DLGAP5Q15398 846 aa12.3□□□□□ -0.44
SYVN1-204ENST00000449943 NIM1KQ8IY84 436 aa12.3□□□□□ -0.44
SYVN1-204ENST00000449943 MYCBPAPQ8TBZ2 947 aa12.3□□□□□ -0.44
SYVN1-204ENST00000449943 NOVA2Q9UNW9 492 aaKnown RBP12.3□□□□□ -0.44
SYVN1-204ENST00000449943 TMEM110-MUSTN1A8MSY1 372 aa12.3□□□□□ -0.44
SYVN1-204ENST00000449943 BTNL10A8MVZ5 291 aa12.3□□□□□ -0.44
SYVN1-204ENST00000449943 BUB1BO60566 1050 aaPredicted RBP12.3□□□□□ -0.44
SYVN1-204ENST00000449943 DHX9Q08211 1270 aaKnown RBP12.3□□□□□ -0.44
SYVN1-204ENST00000449943 SF3A3Q12874 501 aaKnown RBP eCLIP12.3□□□□□ -0.441e-6■■■■□ 19.8
SYVN1-204ENST00000449943 MAEAQ7L5Y9 396 aa12.3□□□□□ -0.44
SYVN1-204ENST00000449943 DNAJC12Q9UKB3 198 aa12.3□□□□□ -0.44
SYVN1-204ENST00000449943 MYO3BQ8WXR4 1341 aa12.3□□□□□ -0.44
SYVN1-204ENST00000449943 CFBP00751 764 aa12.3□□□□□ -0.44
SYVN1-204ENST00000449943 FERP16591 822 aa12.3□□□□□ -0.44
SYVN1-204ENST00000449943 DRAP1Q14919 205 aaPredicted RBP12.3□□□□□ -0.44
SYVN1-204ENST00000449943 KRT71Q3SY84 523 aa12.3□□□□□ -0.44
SYVN1-204ENST00000449943 NT5DC3Q86UY8 548 aa12.3□□□□□ -0.44
SYVN1-204ENST00000449943 CCDC26Q8TAB7 109 aa12.3□□□□□ -0.44
SYVN1-204ENST00000449943 SLC35G2Q8TBE7 412 aa12.3□□□□□ -0.44
SYVN1-204ENST00000449943 CTNNBL1Q8WYA6 563 aaPredicted RBP12.3□□□□□ -0.44
SYVN1-204ENST00000449943 DYDC2Q96IM9 177 aa12.3□□□□□ -0.44
SYVN1-204ENST00000449943 ATP8A1Q9Y2Q0 1164 aa12.3□□□□□ -0.44
SYVN1-204ENST00000449943 UTP11Q9Y3A2 253 aaKnown RBP12.3□□□□□ -0.44
SYVN1-204ENST00000449943 NDUFB10O96000 172 aa12.29□□□□□ -0.44
SYVN1-204ENST00000449943 CPP00450 1065 aa12.29□□□□□ -0.44
SYVN1-204ENST00000449943 SYDE2Q5VT97 1194 aa12.29□□□□□ -0.44
SYVN1-204ENST00000449943 MICALCLQ6ZW33 695 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms