RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 OXER1Q8TDS5 423 aa17.19■□□□□ 0.34
CHD3-205ENST00000449744 TMEM40Q8WWA1 233 aa17.19■□□□□ 0.34
CHD3-205ENST00000449744 ZNF689Q96CS4 500 aaPredicted RBP17.19■□□□□ 0.34
CHD3-205ENST00000449744 TMX1Q9H3N1 280 aa17.19■□□□□ 0.34
CHD3-205ENST00000449744 RNF216Q9NWF9 866 aaPredicted RBP17.19■□□□□ 0.34
CHD3-205ENST00000449744 SEPT9Q9UHD8 586 aaPredicted RBP17.19■□□□□ 0.34
CHD3-205ENST00000449744 ST3GAL5Q9UNP4 418 aa17.19■□□□□ 0.34
CHD3-205ENST00000449744 EVPLQ92817 2033 aa17.19■□□□□ 0.34
CHD3-205ENST00000449744 LOXHD1Q8IVV2 1947 aa17.19■□□□□ 0.34
CHD3-205ENST00000449744 TTC3P53804 2025 aa17.18■□□□□ 0.34
CHD3-205ENST00000449744 RB1P06400 928 aa17.18■□□□□ 0.34
CHD3-205ENST00000449744 FDPSP14324 419 aaKnown RBP17.18■□□□□ 0.34
CHD3-205ENST00000449744 NLRP11P59045 1033 aaKnown RBP17.18■□□□□ 0.34
CHD3-205ENST00000449744 MTERF2Q49AM1 385 aa17.18■□□□□ 0.34
CHD3-205ENST00000449744 B3GNT9Q6UX72 402 aa17.18■□□□□ 0.34
CHD3-205ENST00000449744 NSUN7Q8NE18 718 aaKnown RBP17.18■□□□□ 0.34
CHD3-205ENST00000449744 MRPL38Q96DV4 380 aaKnown RBP17.18■□□□□ 0.34
CHD3-205ENST00000449744 FAM20AQ96MK3 541 aa17.18■□□□□ 0.34
CHD3-205ENST00000449744 SCLT1Q96NL6 688 aa17.18■□□□□ 0.34
CHD3-205ENST00000449744 RC3H2Q9HBD1 1191 aaKnown RBP17.18■□□□□ 0.34
CHD3-205ENST00000449744 C1orf112Q9NSG2 853 aa17.18■□□□□ 0.34
CHD3-205ENST00000449744 PCDHB7Q9Y5E2 793 aa17.18■□□□□ 0.34
CHD3-205ENST00000449744 DKC1O60832 514 aaKnown RBP eCLIP17.17■□□□□ 0.34
CHD3-205ENST00000449744 GPR32O75388 356 aa17.17■□□□□ 0.34
CHD3-205ENST00000449744 BMPR1AP36894 532 aa17.17■□□□□ 0.34
CHD3-205ENST00000449744 SARSP49591 514 aaKnown RBP17.17■□□□□ 0.34
CHD3-205ENST00000449744 PSMC5P62195 406 aa17.17■□□□□ 0.34
CHD3-205ENST00000449744 TIGD5Q53EQ6 642 aa17.17■□□□□ 0.34
CHD3-205ENST00000449744 FAM228AQ86W67 206 aa17.17■□□□□ 0.34
CHD3-205ENST00000449744 CMTR2Q8IYT2 770 aaKnown RBP17.17■□□□□ 0.34
CHD3-205ENST00000449744 ADAMTS19Q8TE59 1207 aa17.17■□□□□ 0.34
CHD3-205ENST00000449744 ADAM2Q99965 735 aa17.17■□□□□ 0.34
CHD3-205ENST00000449744 C11orf84Q9BUA3 381 aaPredicted RBP17.17■□□□□ 0.34
CHD3-205ENST00000449744 NIFKQ9BYG3 293 aaKnown RBP17.17■□□□□ 0.34
CHD3-205ENST00000449744 WDR81Q562E7 1941 aa17.17■□□□□ 0.34
CHD3-205ENST00000449744 RALGAPA2Q2PPJ7 1873 aa17.16■□□□□ 0.34
CHD3-205ENST00000449744 NLRC5Q86WI3 1866 aa17.16■□□□□ 0.34
CHD3-205ENST00000449744 DDX11L8A8MPP1 907 aa17.16■□□□□ 0.34
CHD3-205ENST00000449744 C5orf67F2Z3F1 127 aa17.16■□□□□ 0.34
CHD3-205ENST00000449744 TBX3O15119 743 aa17.16■□□□□ 0.34
CHD3-205ENST00000449744 JAK2O60674 1132 aa17.16■□□□□ 0.34
CHD3-205ENST00000449744 BAG4O95429 457 aaKnown RBP17.16■□□□□ 0.34
CHD3-205ENST00000449744 FOSBP53539 338 aa17.16■□□□□ 0.34
CHD3-205ENST00000449744 NR5A1Q13285 461 aa17.16■□□□□ 0.34
CHD3-205ENST00000449744 PPP2R5CQ13362 524 aa17.16■□□□□ 0.34
CHD3-205ENST00000449744 PAN2Q504Q3 1202 aaKnown RBP17.16■□□□□ 0.34
CHD3-205ENST00000449744 SLC24A5Q71RS6 500 aa17.16■□□□□ 0.34
CHD3-205ENST00000449744 LINC01465Q8N7H1 131 aa17.16■□□□□ 0.34
CHD3-205ENST00000449744 BANK1Q8NDB2 785 aa17.16■□□□□ 0.34
CHD3-205ENST00000449744 CLP1Q92989 425 aaKnown RBP17.16■□□□□ 0.34
CHD3-205ENST00000449744 UHRF1Q96T88 793 aaPredicted RBP17.16■□□□□ 0.34
CHD3-205ENST00000449744 KCNMB3Q9NPA1 279 aa17.16■□□□□ 0.34
CHD3-205ENST00000449744 RGS18Q9NS28 235 aa17.16■□□□□ 0.34
CHD3-205ENST00000449744 MGEA5O60502 916 aa17.15■□□□□ 0.34
CHD3-205ENST00000449744 ZSCAN20P17040 1043 aaPredicted RBP17.15■□□□□ 0.34
CHD3-205ENST00000449744 DNM2P50570 870 aa17.15■□□□□ 0.34
CHD3-205ENST00000449744 KCNQ1P51787 676 aa17.15■□□□□ 0.34
CHD3-205ENST00000449744 TARBP2Q15633 366 aaKnown RBP17.15■□□□□ 0.34
CHD3-205ENST00000449744 EARS2Q5JPH6 523 aaKnown RBP17.15■□□□□ 0.34
CHD3-205ENST00000449744 CRIPAKQ8N1N5 446 aa17.15■□□□□ 0.34
CHD3-205ENST00000449744 NLRP7Q8WX94 980 aa17.15■□□□□ 0.34
CHD3-205ENST00000449744 ZNF668Q96K58 619 aaPredicted RBP17.15■□□□□ 0.34
CHD3-205ENST00000449744 PLVAPQ9BX97 442 aa17.15■□□□□ 0.34
CHD3-205ENST00000449744 LMAN2LQ9H0V9 348 aa17.15■□□□□ 0.34
CHD3-205ENST00000449744 ADAMTS10Q9H324 1103 aa17.15■□□□□ 0.34
CHD3-205ENST00000449744 VAV3Q9UKW4 847 aa17.15■□□□□ 0.34
CHD3-205ENST00000449744 LIMCH1Q9UPQ0 1083 aa17.15■□□□□ 0.34
CHD3-205ENST00000449744 MRPL42Q9Y6G3 142 aaKnown RBP17.15■□□□□ 0.34
CHD3-205ENST00000449744 CHD7Q9P2D1 2997 aa17.15■□□□□ 0.34
CHD3-205ENST00000449744 TMEM150BA6NC51 233 aa17.14■□□□□ 0.33
CHD3-205ENST00000449744 FAM205CA6NFA0 338 aa17.14■□□□□ 0.33
CHD3-205ENST00000449744 EML1O00423 815 aa17.14■□□□□ 0.33
CHD3-205ENST00000449744 MMP1P03956 469 aa17.14■□□□□ 0.33
CHD3-205ENST00000449744 BMP1P13497 986 aa17.14■□□□□ 0.33
CHD3-205ENST00000449744 EIF4BP23588 611 aaKnown RBP17.14■□□□□ 0.33
CHD3-205ENST00000449744 QARSP47897 775 aaKnown RBP17.14■□□□□ 0.33
CHD3-205ENST00000449744 GPC3P51654 580 aa17.14■□□□□ 0.33
CHD3-205ENST00000449744 CDC42EP1Q00587 391 aa17.14■□□□□ 0.33
CHD3-205ENST00000449744 POTEDQ86YR6 584 aa17.14■□□□□ 0.33
CHD3-205ENST00000449744 DIS3L2Q8IYB7 885 aaKnown RBP17.14■□□□□ 0.33
CHD3-205ENST00000449744 SLFN12Q8IYM2 578 aa17.14■□□□□ 0.33
CHD3-205ENST00000449744 JPH2Q9BR39 696 aaPredicted RBP17.14■□□□□ 0.33
CHD3-205ENST00000449744 SH2D3AQ9BRG2 576 aa17.14■□□□□ 0.33
CHD3-205ENST00000449744 NSUN3Q9H649 340 aaKnown RBP17.14■□□□□ 0.33
CHD3-205ENST00000449744 BTBD18B2RXH4 712 aa17.13■□□□□ 0.33
CHD3-205ENST00000449744 C9IYK1 514 aa17.13■□□□□ 0.33
CHD3-205ENST00000449744 STBD1O95210 358 aa17.13■□□□□ 0.33
CHD3-205ENST00000449744 P4HBP07237 508 aaKnown RBP17.13■□□□□ 0.33
CHD3-205ENST00000449744 LINC00271P0C7V0 271 aa17.13■□□□□ 0.33
CHD3-205ENST00000449744 DARSP14868 501 aaKnown RBP17.13■□□□□ 0.33
CHD3-205ENST00000449744 GATMP50440 423 aa17.13■□□□□ 0.33
CHD3-205ENST00000449744 EPHA7Q15375 998 aa17.13■□□□□ 0.33
CHD3-205ENST00000449744 SPOUT1Q5T280 376 aaKnown RBP17.13■□□□□ 0.33
CHD3-205ENST00000449744 NCAPH2Q6IBW4 605 aa17.13■□□□□ 0.33
CHD3-205ENST00000449744 HAS1Q92839 578 aa17.13■□□□□ 0.33
CHD3-205ENST00000449744 TNFRSF25Q93038 417 aa17.13■□□□□ 0.33
CHD3-205ENST00000449744 GCOM2Q9BZD3 368 aaPredicted RBP17.13■□□□□ 0.33
CHD3-205ENST00000449744 UBE2ZQ9H832 354 aaPredicted RBP17.13■□□□□ 0.33
CHD3-205ENST00000449744 ATP6V0A4Q9HBG4 840 aa17.13■□□□□ 0.33
CHD3-205ENST00000449744 TBKBP1A7MCY6 615 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms