RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 CACNB3P54284 484 aa13.38□□□□□ -0.27
UBE3B-204ENST00000449510 LRRC36Q1X8D7 754 aa13.38□□□□□ -0.27
UBE3B-204ENST00000449510 FBXL16Q8N461 479 aa13.38□□□□□ -0.27
UBE3B-204ENST00000449510 TTC16Q8NEE8 873 aa13.38□□□□□ -0.27
UBE3B-204ENST00000449510 C18orf8Q96DM3 657 aa13.38□□□□□ -0.27
UBE3B-204ENST00000449510 DYDC2Q96IM9 177 aa13.38□□□□□ -0.27
UBE3B-204ENST00000449510 G3BP2Q9UN86 482 aaKnown RBP13.38□□□□□ -0.27
UBE3B-204ENST00000449510 MINPP1Q9UNW1 487 aa13.38□□□□□ -0.27
UBE3B-204ENST00000449510 ZNF804BA4D1E1 1349 aa13.38□□□□□ -0.27
UBE3B-204ENST00000449510 TMEM120BA0PK00 339 aa13.37□□□□□ -0.27
UBE3B-204ENST00000449510 SHBGP04278 402 aa13.37□□□□□ -0.27
UBE3B-204ENST00000449510 FERP16591 822 aa13.37□□□□□ -0.27
UBE3B-204ENST00000449510 DYNLT1P63172 113 aa13.37□□□□□ -0.27
UBE3B-204ENST00000449510 IRX4P78413 519 aa13.37□□□□□ -0.27
UBE3B-204ENST00000449510 C10orf76Q5T2E6 689 aa13.37□□□□□ -0.27
UBE3B-204ENST00000449510 PPP1R21Q6ZMI0 780 aa13.37□□□□□ -0.27
UBE3B-204ENST00000449510 DGKHQ86XP1 1220 aa13.37□□□□□ -0.27
UBE3B-204ENST00000449510 ELOA2Q8IYF1 753 aaPredicted RBP13.37□□□□□ -0.27
UBE3B-204ENST00000449510 CPXCR1Q8N123 301 aa13.37□□□□□ -0.27
UBE3B-204ENST00000449510 SPATA20Q8TB22 786 aa13.37□□□□□ -0.27
UBE3B-204ENST00000449510 BTBD6Q96KE9 485 aa13.37□□□□□ -0.27
UBE3B-204ENST00000449510 RAB3IPQ96QF0 476 aaPredicted RBP13.37□□□□□ -0.27
UBE3B-204ENST00000449510 BRIP1Q9BX63 1249 aa13.37□□□□□ -0.27
UBE3B-204ENST00000449510 MAGEF1Q9HAY2 307 aa13.37□□□□□ -0.27
UBE3B-204ENST00000449510 ABCF3Q9NUQ8 709 aa13.37□□□□□ -0.27
UBE3B-204ENST00000449510 RGL1Q9NZL6 768 aa13.37□□□□□ -0.27
UBE3B-204ENST00000449510 TRIM33Q9UPN9 1127 aa13.37□□□□□ -0.27
UBE3B-204ENST00000449510 OVOS2A0A0G2JMS6 1433 aa13.37□□□□□ -0.27
UBE3B-204ENST00000449510 SSU72P8A0A1W2PR75 194 aa13.37□□□□□ -0.27
UBE3B-204ENST00000449510 ATP2A2P16615 1042 aaKnown RBP13.37□□□□□ -0.27
UBE3B-204ENST00000449510 KCNJ2P63252 427 aa13.37□□□□□ -0.27
UBE3B-204ENST00000449510 IL9RQ01113 521 aa13.37□□□□□ -0.27
UBE3B-204ENST00000449510 CCDC62Q6P9F0 684 aa13.37□□□□□ -0.27
UBE3B-204ENST00000449510 SYNCQ9H7C4 482 aa13.37□□□□□ -0.27
UBE3B-204ENST00000449510 NAGPAQ9UK23 515 aa13.37□□□□□ -0.27
UBE3B-204ENST00000449510 BYSLQ13895 437 aaKnown RBP13.37□□□□□ -0.27
UBE3B-204ENST00000449510 KIAA1755Q5JYT7 1200 aa13.37□□□□□ -0.27
UBE3B-204ENST00000449510 BARGINQ6ZT62 677 aa13.37□□□□□ -0.27
UBE3B-204ENST00000449510 IQCKQ8N0W5 287 aa13.37□□□□□ -0.27
UBE3B-204ENST00000449510 C4orf33Q8N1A6 199 aa13.37□□□□□ -0.27
UBE3B-204ENST00000449510 WDR66Q8TBY9 1149 aa13.37□□□□□ -0.27
UBE3B-204ENST00000449510 ERP27Q96DN0 273 aa13.37□□□□□ -0.27
UBE3B-204ENST00000449510 LZTS2Q9BRK4 669 aa13.37□□□□□ -0.27
UBE3B-204ENST00000449510 PARP2Q9UGN5 583 aa13.37□□□□□ -0.27
UBE3B-204ENST00000449510 RABGAP1Q9Y3P9 1069 aa13.37□□□□□ -0.27
UBE3B-204ENST00000449510 EXOC1LA0A1B0GW35 172 aa13.36□□□□□ -0.27
UBE3B-204ENST00000449510 FSBPO95073 299 aa13.36□□□□□ -0.27
UBE3B-204ENST00000449510 ATP6V1G2O95670 118 aa13.36□□□□□ -0.27
UBE3B-204ENST00000449510 NR3C1P04150 777 aa13.36□□□□□ -0.27
UBE3B-204ENST00000449510 LMNB1P20700 586 aa13.36□□□□□ -0.27
UBE3B-204ENST00000449510 HSPA1LP34931 641 aa13.36□□□□□ -0.27
UBE3B-204ENST00000449510 CASP4P49662 377 aa13.36□□□□□ -0.27
UBE3B-204ENST00000449510 MEA1Q16626 185 aa13.36□□□□□ -0.27
UBE3B-204ENST00000449510 GALNT17Q6IS24 598 aa13.36□□□□□ -0.27
UBE3B-204ENST00000449510 ZNF571Q7Z3V5 609 aaPredicted RBP13.36□□□□□ -0.27
UBE3B-204ENST00000449510 KLF6Q99612 283 aaPredicted RBP13.36□□□□□ -0.27
UBE3B-204ENST00000449510 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.36□□□□□ -0.27
UBE3B-204ENST00000449510 ADAMTS13Q76LX8 1427 aa13.36□□□□□ -0.27
UBE3B-204ENST00000449510 NMT1P30419 496 aaKnown RBP13.36□□□□□ -0.27
UBE3B-204ENST00000449510 ADCY2Q08462 1091 aa13.36□□□□□ -0.27
UBE3B-204ENST00000449510 PSMD6Q15008 389 aa13.36□□□□□ -0.27
UBE3B-204ENST00000449510 KCNK18Q7Z418 384 aa13.36□□□□□ -0.27
UBE3B-204ENST00000449510 SLC30A5Q8TAD4 765 aa13.36□□□□□ -0.27
UBE3B-204ENST00000449510 CAVIN3Q969G5 261 aa13.36□□□□□ -0.27
UBE3B-204ENST00000449510 SH3GL2Q99962 352 aa13.36□□□□□ -0.27
UBE3B-204ENST00000449510 C7orf25Q9BPX7 421 aa13.36□□□□□ -0.27
UBE3B-204ENST00000449510 OSBPL7Q9BZF2 842 aa13.36□□□□□ -0.27
UBE3B-204ENST00000449510 AGTPBP1Q9UPW5 1226 aa13.36□□□□□ -0.27
UBE3B-204ENST00000449510 PVALEFA0A1B0GWK0 134 aa13.36□□□□□ -0.27
UBE3B-204ENST00000449510 CFAP69A5D8W1 941 aa13.36□□□□□ -0.27
UBE3B-204ENST00000449510 USP17L10C9JJH3 530 aa13.36□□□□□ -0.27
UBE3B-204ENST00000449510 TARSP26639 723 aaKnown RBP13.36□□□□□ -0.27
UBE3B-204ENST00000449510 USP11P51784 963 aa13.36□□□□□ -0.27
UBE3B-204ENST00000449510 MYL7Q01449 175 aa13.36□□□□□ -0.27
UBE3B-204ENST00000449510 DNAJC3Q13217 504 aa13.36□□□□□ -0.27
UBE3B-204ENST00000449510 ITGB3BPQ13352 177 aaPredicted RBP13.36□□□□□ -0.27
UBE3B-204ENST00000449510 EPC2Q52LR7 807 aa13.36□□□□□ -0.27
UBE3B-204ENST00000449510 ZC2HC1CQ53FD0 456 aaPredicted RBP13.36□□□□□ -0.27
UBE3B-204ENST00000449510 SWT1Q5T5J6 900 aaKnown RBP13.36□□□□□ -0.27
UBE3B-204ENST00000449510 ANKRD2Q9GZV1 360 aa13.36□□□□□ -0.27
UBE3B-204ENST00000449510 METTL5Q9NRN9 209 aaKnown RBP13.36□□□□□ -0.27
UBE3B-204ENST00000449510 CNOT8Q9UFF9 292 aaKnown RBP13.36□□□□□ -0.27
UBE3B-204ENST00000449510 SRP68Q9UHB9 627 aaKnown RBP13.36□□□□□ -0.27
UBE3B-204ENST00000449510 LOC102724428A0A0B4J2F2 783 aa13.35□□□□□ -0.27
UBE3B-204ENST00000449510 K7ENM7 598 aa13.35□□□□□ -0.27
UBE3B-204ENST00000449510 SIK1P57059 783 aa13.35□□□□□ -0.27
UBE3B-204ENST00000449510 SKOR1P84550 965 aa13.35□□□□□ -0.27
UBE3B-204ENST00000449510 MDH1BQ5I0G3 518 aa13.35□□□□□ -0.27
UBE3B-204ENST00000449510 JAMLQ86YT9 394 aa13.35□□□□□ -0.27
UBE3B-204ENST00000449510 SLF2Q8IX21 1173 aa13.35□□□□□ -0.27
UBE3B-204ENST00000449510 LRRC37BQ96QE4 947 aa13.35□□□□□ -0.27
UBE3B-204ENST00000449510 USP15Q9Y4E8 981 aaPredicted RBP13.35□□□□□ -0.27
UBE3B-204ENST00000449510 PNPLA7Q6ZV29 1317 aa13.35□□□□□ -0.27
UBE3B-204ENST00000449510 MIIPQ5JXC2 388 aa13.35□□□□□ -0.27
UBE3B-204ENST00000449510 SPATA21Q7Z572 469 aa13.35□□□□□ -0.27
UBE3B-204ENST00000449510 SPDYE1Q8NFV5 336 aaPredicted RBP13.35□□□□□ -0.27
UBE3B-204ENST00000449510 NSUN4Q96CB9 384 aaKnown RBP13.35□□□□□ -0.27
UBE3B-204ENST00000449510 TTC1Q99614 292 aa13.35□□□□□ -0.27
UBE3B-204ENST00000449510 ZC3H12CQ9C0D7 883 aaKnown RBP13.35□□□□□ -0.27
UBE3B-204ENST00000449510 METTL14Q9HCE5 456 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms