RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 TBC1D8BQ0IIM8 1120 aa16.23■□□□□ 0.19
TNF-208ENST00000449264 COASYQ13057 564 aa16.23■□□□□ 0.19
TNF-208ENST00000449264 PPFIA1Q13136 1202 aa16.23■□□□□ 0.19
TNF-208ENST00000449264 TARBP2Q15633 366 aaKnown RBP16.23■□□□□ 0.19
TNF-208ENST00000449264 STX1AQ16623 288 aa16.23■□□□□ 0.19
TNF-208ENST00000449264 LHX8Q68G74 356 aa16.23■□□□□ 0.19
TNF-208ENST00000449264 LRSAM1Q6UWE0 723 aa16.23■□□□□ 0.19
TNF-208ENST00000449264 SLC7A3Q8WY07 619 aa16.23■□□□□ 0.19
TNF-208ENST00000449264 HPS3Q969F9 1004 aa16.23■□□□□ 0.19
TNF-208ENST00000449264 KATNAL1Q9BW62 490 aa16.23■□□□□ 0.19
TNF-208ENST00000449264 RNF208Q9H0X6 261 aa16.23■□□□□ 0.19
TNF-208ENST00000449264 GPRC5CQ9NQ84 441 aa16.23■□□□□ 0.19
TNF-208ENST00000449264 SFI1A8K8P3 1242 aa16.22■□□□□ 0.19
TNF-208ENST00000449264 ZBTB42B2RXF5 422 aa16.22■□□□□ 0.19
TNF-208ENST00000449264 ASGR1P07306 291 aa16.22■□□□□ 0.19
TNF-208ENST00000449264 CST5P28325 142 aaPredicted RBP16.22■□□□□ 0.19
TNF-208ENST00000449264 MORC3Q14149 939 aa16.22■□□□□ 0.19
TNF-208ENST00000449264 LRRC41Q15345 812 aa16.22■□□□□ 0.19
TNF-208ENST00000449264 KCNA10Q16322 511 aa16.22■□□□□ 0.19
TNF-208ENST00000449264 SMYD4Q8IYR2 804 aaPredicted RBP16.22■□□□□ 0.19
TNF-208ENST00000449264 KLHDC9Q8NEP7 349 aa16.22■□□□□ 0.19
TNF-208ENST00000449264 DEFB118Q96PH6 123 aa16.22■□□□□ 0.19
TNF-208ENST00000449264 MTG1Q9BT17 334 aaPredicted RBP16.22■□□□□ 0.19
TNF-208ENST00000449264 FUCA2Q9BTY2 467 aa16.22■□□□□ 0.19
TNF-208ENST00000449264 TBC1D7Q9P0N9 293 aa16.22■□□□□ 0.19
TNF-208ENST00000449264 PVALEFA0A1B0GWK0 134 aa16.21■□□□□ 0.19
TNF-208ENST00000449264 KPNA6O60684 536 aa16.21■□□□□ 0.19
TNF-208ENST00000449264 RHOBTB3O94955 611 aa16.21■□□□□ 0.19
TNF-208ENST00000449264 RFC5P40937 340 aa16.21■□□□□ 0.19
TNF-208ENST00000449264 NLRP12P59046 1061 aa16.21■□□□□ 0.19
TNF-208ENST00000449264 NKX3-2P78367 333 aa16.21■□□□□ 0.19
TNF-208ENST00000449264 KCNB1Q14721 858 aa16.21■□□□□ 0.19
TNF-208ENST00000449264 GRIK4Q16099 956 aa16.21■□□□□ 0.19
TNF-208ENST00000449264 PKN2Q16513 984 aaKnown RBP16.21■□□□□ 0.19
TNF-208ENST00000449264 DPCR1Q3MIW9 517 aa16.21■□□□□ 0.19
TNF-208ENST00000449264 HERC4Q5GLZ8 1057 aaPredicted RBP16.21■□□□□ 0.19
TNF-208ENST00000449264 ZNF484Q5JVG2 852 aa16.21■□□□□ 0.19
TNF-208ENST00000449264 SFR1Q86XK3 245 aa16.21■□□□□ 0.19
TNF-208ENST00000449264 TRIML1Q8N9V2 468 aa16.21■□□□□ 0.19
TNF-208ENST00000449264 PCSK9Q8NBP7 692 aaKnown RBP16.21■□□□□ 0.19
TNF-208ENST00000449264 MCPH1Q8NEM0 835 aa16.21■□□□□ 0.19
TNF-208ENST00000449264 ZBTB10Q96DT7 871 aa16.21■□□□□ 0.19
TNF-208ENST00000449264 CEP89Q96ST8 783 aa16.21■□□□□ 0.19
TNF-208ENST00000449264 DHX33Q9H6R0 707 aaKnown RBP16.21■□□□□ 0.19
TNF-208ENST00000449264 PARVGQ9HBI0 331 aa16.21■□□□□ 0.19
TNF-208ENST00000449264 PAK6Q9NQU5 681 aaPredicted RBP16.21■□□□□ 0.19
TNF-208ENST00000449264 XPNPEP1Q9NQW7 623 aa16.21■□□□□ 0.19
TNF-208ENST00000449264 ODF2LQ9ULJ1 636 aa16.21■□□□□ 0.19
TNF-208ENST00000449264 GDAQ9Y2T3 454 aa16.21■□□□□ 0.19
TNF-208ENST00000449264 COL4A3BPQ9Y5P4 624 aa16.21■□□□□ 0.19
TNF-208ENST00000449264 TRIP12Q14669 1992 aaPredicted RBP16.21■□□□□ 0.19
TNF-208ENST00000449264 DNAH12Q6ZR08 3092 aa16.21■□□□□ 0.19
TNF-208ENST00000449264 COL1A2P08123 1366 aa16.21■□□□□ 0.18
TNF-208ENST00000449264 FRMD3A2A2Y4 597 aa16.21■□□□□ 0.18
TNF-208ENST00000449264 SMIM10L2AP0DMW4 78 aa16.21■□□□□ 0.18
TNF-208ENST00000449264 SMIM10L2BP0DMW5 78 aa16.21■□□□□ 0.18
TNF-208ENST00000449264 BMP6P22004 513 aa16.21■□□□□ 0.18
TNF-208ENST00000449264 MAPK7Q13164 816 aa16.21■□□□□ 0.18
TNF-208ENST00000449264 ANO6Q4KMQ2 910 aa16.21■□□□□ 0.18
TNF-208ENST00000449264 DAW1Q8N136 415 aa16.21■□□□□ 0.18
TNF-208ENST00000449264 MYCT1Q8N699 235 aa16.21■□□□□ 0.18
TNF-208ENST00000449264 TMEM143Q96AN5 459 aa16.21■□□□□ 0.18
TNF-208ENST00000449264 DRC1Q96MC2 740 aa16.21■□□□□ 0.18
TNF-208ENST00000449264 TIPINQ9BVW5 301 aa16.21■□□□□ 0.18
TNF-208ENST00000449264 DNAJC25Q9H1X3 360 aa16.21■□□□□ 0.18
TNF-208ENST00000449264 TSPY26PQ9H489 355 aa16.21■□□□□ 0.18
TNF-208ENST00000449264 SUGCTQ9HAC7 445 aa16.21■□□□□ 0.18
TNF-208ENST00000449264 ANO10Q9NW15 660 aa16.21■□□□□ 0.18
TNF-208ENST00000449264 PPME1Q9Y570 386 aa16.21■□□□□ 0.18
TNF-208ENST00000449264 HAS3O00219 553 aa16.2■□□□□ 0.18
TNF-208ENST00000449264 MAFO75444 373 aaPredicted RBP16.2■□□□□ 0.18
TNF-208ENST00000449264 FAM26FQ5R3K3 315 aa16.2■□□□□ 0.18
TNF-208ENST00000449264 CCSAPQ6IQ19 270 aaPredicted RBP16.2■□□□□ 0.18
TNF-208ENST00000449264 LRRC71Q8N4P6 559 aa16.2■□□□□ 0.18
TNF-208ENST00000449264 METTL13Q8N6R0 699 aa16.2■□□□□ 0.18
TNF-208ENST00000449264 LMBR1Q8WVP7 490 aa16.2■□□□□ 0.18
TNF-208ENST00000449264 ZNF333Q96JL9 665 aa16.2■□□□□ 0.18
TNF-208ENST00000449264 POLR3FQ9H1D9 316 aaPredicted RBP16.2■□□□□ 0.18
TNF-208ENST00000449264 SLC39A2Q9NP94 309 aa16.2■□□□□ 0.18
TNF-208ENST00000449264 SETD4Q9NVD3 440 aa16.2■□□□□ 0.18
TNF-208ENST00000449264 C22orf31O95567 290 aa16.19■□□□□ 0.18
TNF-208ENST00000449264 GAP43P17677 238 aa16.19■□□□□ 0.18
TNF-208ENST00000449264 STK4Q13043 487 aa16.19■□□□□ 0.18
TNF-208ENST00000449264 ODR4Q5SWX8 454 aa16.19■□□□□ 0.18
TNF-208ENST00000449264 ZNF658Q5TYW1 1059 aaPredicted RBP16.19■□□□□ 0.18
TNF-208ENST00000449264 C11orf57Q6ZUT1 292 aaPredicted RBP16.19■□□□□ 0.18
TNF-208ENST00000449264 C7orf31Q8N865 590 aa16.19■□□□□ 0.18
TNF-208ENST00000449264 KIFAP3Q92845 792 aa16.19■□□□□ 0.18
TNF-208ENST00000449264 PDLIM7Q9NR12 457 aa16.19■□□□□ 0.18
TNF-208ENST00000449264 MAPK8IP1Q9UQF2 711 aa16.19■□□□□ 0.18
TNF-208ENST00000449264 CLCN3P51790 818 aa16.18■□□□□ 0.18
TNF-208ENST00000449264 ZNF131P52739 623 aa16.18■□□□□ 0.18
TNF-208ENST00000449264 ACLYP53396 1101 aa16.18■□□□□ 0.18
TNF-208ENST00000449264 EHHADHQ08426 723 aa16.18■□□□□ 0.18
TNF-208ENST00000449264 DRP2Q13474 957 aa16.18■□□□□ 0.18
TNF-208ENST00000449264 FAM47CQ5HY64 1035 aa16.18■□□□□ 0.18
TNF-208ENST00000449264 ARRDC4Q8NCT1 418 aa16.18■□□□□ 0.18
TNF-208ENST00000449264 KIAA0895Q8NCT3 520 aa16.18■□□□□ 0.18
TNF-208ENST00000449264 GLIS3Q8NEA6 775 aa16.18■□□□□ 0.18
TNF-208ENST00000449264 VTI1AQ96AJ9 217 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms