RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 FAM178BQ8IXR5 827 aa11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 GOLGA5Q8TBA6 731 aa11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 ATP6V0A1Q93050 837 aa11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 OPTNQ96CV9 577 aa11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 CLMNQ96JQ2 1002 aa11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 TRAIPQ9BWF2 469 aa11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 EDEM3Q9BZQ6 932 aa11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 ASCC2Q9H1I8 757 aaPredicted RBP11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 METTL14Q9HCE5 456 aaKnown RBP11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 ZNHIT6Q9NWK9 470 aaKnown RBP11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 PNMA3Q9UL41 463 aa11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 USP27XA6NNY8 438 aa11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 RSPH10B2B2RC85 870 aa11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 SLC16A3O15427 465 aaKnown RBP11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 ATP9AO75110 1047 aa11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 PSAPP07602 524 aa11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 CCDC175P0C221 793 aa11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 RSPH10BP0C881 870 aa11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 NR2F2P24468 414 aa11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 YWHABP31946 246 aaKnown RBP11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 ICAM3P32942 547 aa11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 RARRES1P49788 294 aa11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 ZBED6P86452 979 aa11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 SNAPC2Q13487 334 aa11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 SYCP1Q15431 976 aa11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 ODR4Q5SWX8 454 aa11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 LDLRAD1Q5T700 205 aa11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 DLK2Q6UY11 383 aa11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 FRMD5Q7Z6J6 570 aa11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 KIF18AQ8NI77 898 aa11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 NLRP7Q8WX94 980 aa11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 DRC1Q96MC2 740 aa11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 BTBD7Q9P203 1132 aa11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 WRAP73Q9P2S5 460 aaPredicted RBP11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 PPP2R2CQ9Y2T4 447 aa11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 LCTP09848 1927 aa11.64□□□□□ -0.55
VIPAS39-203ENST00000448935 WDR81Q562E7 1941 aa11.63□□□□□ -0.55
VIPAS39-203ENST00000448935 TTC26A0AVF1 554 aa11.63□□□□□ -0.55
VIPAS39-203ENST00000448935 SPATA31C2B4DYI2 1134 aa11.63□□□□□ -0.55
VIPAS39-203ENST00000448935 POTEB2H3BUK9 544 aa11.63□□□□□ -0.55
VIPAS39-203ENST00000448935 HIP1RO75146 1068 aa11.63□□□□□ -0.55
VIPAS39-203ENST00000448935 PRPF6O94906 941 aaKnown RBP11.63□□□□□ -0.55
VIPAS39-203ENST00000448935 MYBP10242 640 aa11.63□□□□□ -0.55
VIPAS39-203ENST00000448935 KCNA2P16389 499 aa11.63□□□□□ -0.55
VIPAS39-203ENST00000448935 ALDH5A1P51649 535 aaPredicted RBP11.63□□□□□ -0.55
VIPAS39-203ENST00000448935 CASP5P51878 434 aa11.63□□□□□ -0.55
VIPAS39-203ENST00000448935 FKBP1BP68106 108 aa11.63□□□□□ -0.55
VIPAS39-203ENST00000448935 HS2ST1Q7LGA3 356 aa11.63□□□□□ -0.55
VIPAS39-203ENST00000448935 ZNF720Q7Z2F6 126 aa11.63□□□□□ -0.55
VIPAS39-203ENST00000448935 NCAPG2Q86XI2 1143 aa11.63□□□□□ -0.55
VIPAS39-203ENST00000448935 TRIM59Q8IWR1 403 aa11.63□□□□□ -0.55
VIPAS39-203ENST00000448935 SLC10A4Q96EP9 437 aa11.63□□□□□ -0.55
VIPAS39-203ENST00000448935 EEF2KMTQ96G04 330 aa11.63□□□□□ -0.55
VIPAS39-203ENST00000448935 PURBQ96QR8 312 aaKnown RBP11.63□□□□□ -0.55
VIPAS39-203ENST00000448935 DNAJC7Q99615 494 aa11.63□□□□□ -0.55
VIPAS39-203ENST00000448935 FGFBP2Q9BYJ0 223 aa11.63□□□□□ -0.55
VIPAS39-203ENST00000448935 JPH1Q9HDC5 661 aaPredicted RBP11.63□□□□□ -0.55
VIPAS39-203ENST00000448935 PLSCR2Q9NRY7 297 aa11.63□□□□□ -0.55
VIPAS39-203ENST00000448935 CGNQ9P2M7 1197 aaKnown RBP11.63□□□□□ -0.55
VIPAS39-203ENST00000448935 SLC9A2Q9UBY0 812 aa11.63□□□□□ -0.55
VIPAS39-203ENST00000448935 LOC102724159A0A0B4J2E5 919 aa11.62□□□□□ -0.55
VIPAS39-203ENST00000448935 ZBTB39O15060 712 aa11.62□□□□□ -0.55
VIPAS39-203ENST00000448935 CCNE2O96020 404 aa11.62□□□□□ -0.55
VIPAS39-203ENST00000448935 EPB41P11171 864 aaKnown RBP11.62□□□□□ -0.55
VIPAS39-203ENST00000448935 C1QTNF8P60827 252 aa11.62□□□□□ -0.55
VIPAS39-203ENST00000448935 MYBPC2Q14324 1141 aa11.62□□□□□ -0.55
VIPAS39-203ENST00000448935 PWP2Q15269 919 aaKnown RBP11.62□□□□□ -0.55
VIPAS39-203ENST00000448935 MIS18BP1Q6P0N0 1132 aa11.62□□□□□ -0.55
VIPAS39-203ENST00000448935 PXYLP1Q8TE99 480 aa11.62□□□□□ -0.55
VIPAS39-203ENST00000448935 PAGR1Q9BTK6 254 aa11.62□□□□□ -0.55
VIPAS39-203ENST00000448935 MKNK1Q9BUB5 465 aa11.62□□□□□ -0.55
VIPAS39-203ENST00000448935 TTYH3Q9C0H2 523 aa11.62□□□□□ -0.55
VIPAS39-203ENST00000448935 NUCKS1Q9H1E3 243 aaKnown RBP11.62□□□□□ -0.55
VIPAS39-203ENST00000448935 MROH8Q9H579 483 aa11.62□□□□□ -0.55
VIPAS39-203ENST00000448935 TMEM206Q9H813 350 aa11.62□□□□□ -0.55
VIPAS39-203ENST00000448935 ARMCX3Q9UH62 379 aaPredicted RBP11.62□□□□□ -0.55
VIPAS39-203ENST00000448935 KCNG1Q9UIX4 513 aa11.62□□□□□ -0.55
VIPAS39-203ENST00000448935 NR3C1P04150 777 aa11.61□□□□□ -0.55
VIPAS39-203ENST00000448935 ABCD1P33897 745 aa11.61□□□□□ -0.55
VIPAS39-203ENST00000448935 RFC5P40937 340 aa11.61□□□□□ -0.55
VIPAS39-203ENST00000448935 SNRPFP62306 86 aaKnown RBP11.61□□□□□ -0.55
VIPAS39-203ENST00000448935 KCNV1Q6PIU1 500 aa11.61□□□□□ -0.55
VIPAS39-203ENST00000448935 MOB2Q70IA6 237 aa11.61□□□□□ -0.55
VIPAS39-203ENST00000448935 MYRIPQ8NFW9 859 aa11.61□□□□□ -0.55
VIPAS39-203ENST00000448935 NEK11Q8NG66 645 aa11.61□□□□□ -0.55
VIPAS39-203ENST00000448935 ST6GALNAC4Q9H4F1 302 aa11.61□□□□□ -0.55
VIPAS39-203ENST00000448935 C17orf75Q9HAS0 396 aa11.61□□□□□ -0.55
VIPAS39-203ENST00000448935 SIK3Q9Y2K2 1263 aa11.61□□□□□ -0.55
VIPAS39-203ENST00000448935 SOWAHDA6NJG2 315 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 SFI1A8K8P3 1242 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 ASTN1O14525 1302 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 USO1O60763 962 aaKnown RBP11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 RGS20O76081 388 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 TGFB3P10600 412 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 PLS3P13797 630 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 EDNRBP24530 442 aa11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 NMT1P30419 496 aaKnown RBP11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 CYLC1P35663 651 aaPredicted RBP11.6□□□□□ -0.55
VIPAS39-203ENST00000448935 ETF1P62495 437 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms