RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 CST5P28325 142 aaPredicted RBP21.65■■□□□ 1.06
SGCE-207ENST00000447873 RFC5P40937 340 aa21.65■■□□□ 1.06
SGCE-207ENST00000447873 TBC1D8BQ0IIM8 1120 aa21.65■■□□□ 1.06
SGCE-207ENST00000447873 MFSD10Q14728 455 aa21.65■■□□□ 1.06
SGCE-207ENST00000447873 KIAA0753Q2KHM9 967 aa21.65■■□□□ 1.06
SGCE-207ENST00000447873 ZNF484Q5JVG2 852 aa21.65■■□□□ 1.06
SGCE-207ENST00000447873 LHX8Q68G74 356 aa21.65■■□□□ 1.06
SGCE-207ENST00000447873 PCSK9Q8NBP7 692 aaKnown RBP21.65■■□□□ 1.06
SGCE-207ENST00000447873 MCPH1Q8NEM0 835 aa21.65■■□□□ 1.06
SGCE-207ENST00000447873 KLHDC9Q8NEP7 349 aa21.65■■□□□ 1.06
SGCE-207ENST00000447873 MTG1Q9BT17 334 aaPredicted RBP21.65■■□□□ 1.06
SGCE-207ENST00000447873 ANO10Q9NW15 660 aa21.65■■□□□ 1.06
SGCE-207ENST00000447873 COL4A3BPQ9Y5P4 624 aa21.65■■□□□ 1.06
SGCE-207ENST00000447873 FRMD3A2A2Y4 597 aa21.65■■□□□ 1.06
SGCE-207ENST00000447873 RSPH10B2B2RC85 870 aa21.65■■□□□ 1.06
SGCE-207ENST00000447873 ZBTB42B2RXF5 422 aa21.65■■□□□ 1.06
SGCE-207ENST00000447873 RSPH10BP0C881 870 aa21.65■■□□□ 1.06
SGCE-207ENST00000447873 PSEN2P49810 448 aa21.65■■□□□ 1.06
SGCE-207ENST00000447873 COASYQ13057 564 aa21.65■■□□□ 1.06
SGCE-207ENST00000447873 EMC2Q15006 297 aa21.65■■□□□ 1.06
SGCE-207ENST00000447873 HERC4Q5GLZ8 1057 aaPredicted RBP21.65■■□□□ 1.06
SGCE-207ENST00000447873 FAM102BQ5T8I3 360 aa21.65■■□□□ 1.06
SGCE-207ENST00000447873 EXOC8Q8IYI6 725 aa21.65■■□□□ 1.06
SGCE-207ENST00000447873 DRC1Q96MC2 740 aa21.65■■□□□ 1.06
SGCE-207ENST00000447873 CEP89Q96ST8 783 aa21.65■■□□□ 1.06
SGCE-207ENST00000447873 TSPY26PQ9H489 355 aa21.65■■□□□ 1.06
SGCE-207ENST00000447873 DHX33Q9H6R0 707 aaKnown RBP21.65■■□□□ 1.06
SGCE-207ENST00000447873 COL1A2P08123 1366 aa21.64■■□□□ 1.05
SGCE-207ENST00000447873 PPFIA1Q13136 1202 aa21.64■■□□□ 1.05
SGCE-207ENST00000447873 PSMD2Q13200 908 aa21.64■■□□□ 1.05
SGCE-207ENST00000447873 KCNA10Q16322 511 aa21.64■■□□□ 1.05
SGCE-207ENST00000447873 ZNF658Q5TYW1 1059 aaPredicted RBP21.64■■□□□ 1.05
SGCE-207ENST00000447873 PARVGQ9HBI0 331 aa21.64■■□□□ 1.05
SGCE-207ENST00000447873 PDLIM7Q9NR12 457 aa21.64■■□□□ 1.05
SGCE-207ENST00000447873 SFI1A8K8P3 1242 aa21.63■■□□□ 1.05
SGCE-207ENST00000447873 HAS3O00219 553 aa21.63■■□□□ 1.05
SGCE-207ENST00000447873 MAFO75444 373 aaPredicted RBP21.63■■□□□ 1.05
SGCE-207ENST00000447873 GAP43P17677 238 aa21.63■■□□□ 1.05
SGCE-207ENST00000447873 BMP6P22004 513 aa21.63■■□□□ 1.05
SGCE-207ENST00000447873 IGBP1P78318 339 aa21.63■■□□□ 1.05
SGCE-207ENST00000447873 EHHADHQ08426 723 aa21.63■■□□□ 1.05
SGCE-207ENST00000447873 MTFR1Q15390 333 aa21.63■■□□□ 1.05
SGCE-207ENST00000447873 DPCR1Q3MIW9 517 aa21.63■■□□□ 1.05
SGCE-207ENST00000447873 CXCL17Q6UXB2 119 aa21.63■■□□□ 1.05
SGCE-207ENST00000447873 MYCT1Q8N699 235 aa21.63■■□□□ 1.05
SGCE-207ENST00000447873 TRAPPC12Q8WVT3 735 aa21.63■■□□□ 1.05
SGCE-207ENST00000447873 JPH2Q9BR39 696 aaPredicted RBP21.63■■□□□ 1.05
SGCE-207ENST00000447873 GTPBP4Q9BZE4 634 aaKnown RBP21.63■■□□□ 1.05
SGCE-207ENST00000447873 RNF208Q9H0X6 261 aa21.63■■□□□ 1.05
SGCE-207ENST00000447873 PAK6Q9NQU5 681 aaPredicted RBP21.63■■□□□ 1.05
SGCE-207ENST00000447873 XPNPEP1Q9NQW7 623 aa21.63■■□□□ 1.05
SGCE-207ENST00000447873 ASGR1P07306 291 aa21.62■■□□□ 1.05
SGCE-207ENST00000447873 CCL5P13501 91 aa21.62■■□□□ 1.05
SGCE-207ENST00000447873 ZNF131P52739 623 aa21.62■■□□□ 1.05
SGCE-207ENST00000447873 MAPK7Q13164 816 aa21.62■■□□□ 1.05
SGCE-207ENST00000447873 LRRC41Q15345 812 aa21.62■■□□□ 1.05
SGCE-207ENST00000447873 GRIK4Q16099 956 aa21.62■■□□□ 1.05
SGCE-207ENST00000447873 ANO6Q4KMQ2 910 aa21.62■■□□□ 1.05
SGCE-207ENST00000447873 CCSAPQ6IQ19 270 aaPredicted RBP21.62■■□□□ 1.05
SGCE-207ENST00000447873 DAW1Q8N136 415 aa21.62■■□□□ 1.05
SGCE-207ENST00000447873 KIFAP3Q92845 792 aa21.62■■□□□ 1.05
SGCE-207ENST00000447873 HPS3Q969F9 1004 aa21.62■■□□□ 1.05
SGCE-207ENST00000447873 GPRC5CQ9NQ84 441 aa21.62■■□□□ 1.05
SGCE-207ENST00000447873 SMIM10L2AP0DMW4 78 aa21.61■■□□□ 1.05
SGCE-207ENST00000447873 SMIM10L2BP0DMW5 78 aa21.61■■□□□ 1.05
SGCE-207ENST00000447873 SOX10P56693 466 aa21.61■■□□□ 1.05
SGCE-207ENST00000447873 STK4Q13043 487 aa21.61■■□□□ 1.05
SGCE-207ENST00000447873 FAM26FQ5R3K3 315 aa21.61■■□□□ 1.05
SGCE-207ENST00000447873 SFR1Q86XK3 245 aa21.61■■□□□ 1.05
SGCE-207ENST00000447873 SMYD4Q8IYR2 804 aaPredicted RBP21.61■■□□□ 1.05
SGCE-207ENST00000447873 MLKLQ8NB16 471 aa21.61■■□□□ 1.05
SGCE-207ENST00000447873 ARRDC4Q8NCT1 418 aa21.61■■□□□ 1.05
SGCE-207ENST00000447873 DEFB118Q96PH6 123 aa21.61■■□□□ 1.05
SGCE-207ENST00000447873 DNAJC25Q9H1X3 360 aa21.61■■□□□ 1.05
SGCE-207ENST00000447873 SUGCTQ9HAC7 445 aa21.61■■□□□ 1.05
SGCE-207ENST00000447873 SLC39A2Q9NP94 309 aa21.61■■□□□ 1.05
SGCE-207ENST00000447873 TBC1D7Q9P0N9 293 aa21.61■■□□□ 1.05
SGCE-207ENST00000447873 LARSQ9P2J5 1176 aaKnown RBP21.61■■□□□ 1.05
SGCE-207ENST00000447873 GDAQ9Y2T3 454 aa21.61■■□□□ 1.05
SGCE-207ENST00000447873 SCN10AQ9Y5Y9 1956 aa21.61■■□□□ 1.05
SGCE-207ENST00000447873 NRCAMQ92823 1304 aa21.61■■□□□ 1.05
SGCE-207ENST00000447873 RRN3P2A6NIE6 340 aa21.61■■□□□ 1.05
SGCE-207ENST00000447873 MAGEB2O15479 319 aa21.61■■□□□ 1.05
SGCE-207ENST00000447873 GAS2O43903 313 aaKnown RBP21.61■■□□□ 1.05
SGCE-207ENST00000447873 ODR4Q5SWX8 454 aa21.61■■□□□ 1.05
SGCE-207ENST00000447873 C7orf31Q8N865 590 aa21.61■■□□□ 1.05
SGCE-207ENST00000447873 RETREG2Q8NC44 543 aa21.61■■□□□ 1.05
SGCE-207ENST00000447873 TMEM143Q96AN5 459 aa21.61■■□□□ 1.05
SGCE-207ENST00000447873 SETD4Q9NVD3 440 aa21.61■■□□□ 1.05
SGCE-207ENST00000447873 SEL1LQ9UBV2 794 aa21.61■■□□□ 1.05
SGCE-207ENST00000447873 DACH1Q9UI36 760 aa21.61■■□□□ 1.05
SGCE-207ENST00000447873 EVPLQ92817 2033 aa21.6■■□□□ 1.05
SGCE-207ENST00000447873 C22orf31O95567 290 aa21.6■■□□□ 1.05
SGCE-207ENST00000447873 PLS3P13797 630 aa21.6■■□□□ 1.05
SGCE-207ENST00000447873 KLRC1P26715 233 aa21.6■■□□□ 1.05
SGCE-207ENST00000447873 FAM178BQ8IXR5 827 aa21.6■■□□□ 1.05
SGCE-207ENST00000447873 METTL13Q8N6R0 699 aa21.6■■□□□ 1.05
SGCE-207ENST00000447873 TSEN34Q9BSV6 310 aaKnown RBP21.6■■□□□ 1.05
SGCE-207ENST00000447873 NAT10Q9H0A0 1025 aaKnown RBP21.6■■□□□ 1.05
SGCE-207ENST00000447873 POLR3FQ9H1D9 316 aaPredicted RBP21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms