RNA–Protein interactions for RNA: ENST00000447480.5

TRIM4-204, Transcript of tripartite motif containing 4, humanhuman

TSL 3

Gene TRIM4, Length 639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-204ENST00000447480 GPATCH11Q8N954 259 aa8.32□□□□□ -1.08
TRIM4-204ENST00000447480 GIMAP8Q8ND71 665 aaPredicted RBP8.32□□□□□ -1.08
TRIM4-204ENST00000447480 NEDD1Q8NHV4 660 aa8.32□□□□□ -1.08
TRIM4-204ENST00000447480 KAT2BQ92831 832 aa8.32□□□□□ -1.08
TRIM4-204ENST00000447480 MIEF2Q96C03 454 aa8.32□□□□□ -1.08
TRIM4-204ENST00000447480 ATP6V1G3Q96LB4 118 aa8.32□□□□□ -1.08
TRIM4-204ENST00000447480 CCT8L2Q96SF2 557 aa8.32□□□□□ -1.08
TRIM4-204ENST00000447480 PLCD4Q9BRC7 762 aa8.32□□□□□ -1.08
TRIM4-204ENST00000447480 LRRC27Q9C0I9 530 aa8.32□□□□□ -1.08
TRIM4-204ENST00000447480 NHEJ1Q9H9Q4 299 aaPredicted RBP8.32□□□□□ -1.08
TRIM4-204ENST00000447480 JADE2Q9NQC1 790 aa8.32□□□□□ -1.08
TRIM4-204ENST00000447480 HOMER3Q9NSC5 361 aa8.32□□□□□ -1.08
TRIM4-204ENST00000447480 ZSWIM5Q9P217 1185 aa8.32□□□□□ -1.08
TRIM4-204ENST00000447480 PCDHB6Q9Y5E3 794 aa8.32□□□□□ -1.08
TRIM4-204ENST00000447480 MANSC4A6NHS7 340 aaPredicted RBP8.31□□□□□ -1.08
TRIM4-204ENST00000447480 CFAP99D6REC4 459 aa8.31□□□□□ -1.08
TRIM4-204ENST00000447480 SLC26A4O43511 780 aa8.31□□□□□ -1.08
TRIM4-204ENST00000447480 USP2O75604 605 aaPredicted RBP8.31□□□□□ -1.08
TRIM4-204ENST00000447480 DDAH1O94760 285 aa8.31□□□□□ -1.08
TRIM4-204ENST00000447480 NR1D1P20393 614 aa8.31□□□□□ -1.08
TRIM4-204ENST00000447480 CCNE1P24864 410 aa8.31□□□□□ -1.08
TRIM4-204ENST00000447480 KIF5BP33176 963 aa8.31□□□□□ -1.08
TRIM4-204ENST00000447480 CLK2P49760 499 aaKnown RBP8.31□□□□□ -1.08
TRIM4-204ENST00000447480 GNAQP50148 359 aa8.31□□□□□ -1.08
TRIM4-204ENST00000447480 HAND2P61296 217 aa8.31□□□□□ -1.08
TRIM4-204ENST00000447480 TNNC1P63316 161 aa8.31□□□□□ -1.08
TRIM4-204ENST00000447480 TFAP4Q01664 338 aa8.31□□□□□ -1.08
TRIM4-204ENST00000447480 TBC1D8BQ0IIM8 1120 aa8.31□□□□□ -1.08
TRIM4-204ENST00000447480 SNAPC2Q13487 334 aa8.31□□□□□ -1.08
TRIM4-204ENST00000447480 CDC37Q16543 378 aaPredicted RBP8.31□□□□□ -1.08
TRIM4-204ENST00000447480 RRP12Q5JTH9 1297 aaKnown RBP8.31□□□□□ -1.08
TRIM4-204ENST00000447480 TTC38Q5R3I4 469 aa8.31□□□□□ -1.08
TRIM4-204ENST00000447480 CEP85LQ5SZL2 805 aa8.31□□□□□ -1.08
TRIM4-204ENST00000447480 LDLRAD1Q5T700 205 aa8.31□□□□□ -1.08
TRIM4-204ENST00000447480 NAA35Q5VZE5 725 aa8.31□□□□□ -1.08
TRIM4-204ENST00000447480 RGMBQ6NW40 437 aa8.31□□□□□ -1.08
TRIM4-204ENST00000447480 TRIM67Q6ZTA4 783 aa8.31□□□□□ -1.08
TRIM4-204ENST00000447480 CATIPQ7Z7H3 387 aa8.31□□□□□ -1.08
TRIM4-204ENST00000447480 MICU3Q86XE3 530 aa8.31□□□□□ -1.08
TRIM4-204ENST00000447480 ZNF280CQ8ND82 737 aa8.31□□□□□ -1.08
TRIM4-204ENST00000447480 ZNF473Q8WTR7 871 aaKnown RBP8.31□□□□□ -1.08
TRIM4-204ENST00000447480 PHKBQ93100 1093 aa8.31□□□□□ -1.08
TRIM4-204ENST00000447480 ZKSCAN4Q969J2 545 aaPredicted RBP8.31□□□□□ -1.08
TRIM4-204ENST00000447480 PBKQ96KB5 322 aa8.31□□□□□ -1.08
TRIM4-204ENST00000447480 NOX5Q96PH1 765 aa8.31□□□□□ -1.08
TRIM4-204ENST00000447480 OSBPL9Q96SU4 736 aa8.31□□□□□ -1.08
TRIM4-204ENST00000447480 CHP1Q99653 195 aa8.31□□□□□ -1.08
TRIM4-204ENST00000447480 WDR18Q9BV38 432 aa8.31□□□□□ -1.08
TRIM4-204ENST00000447480 VPS16Q9H269 839 aa8.31□□□□□ -1.08
TRIM4-204ENST00000447480 NYAP2Q9P242 653 aa8.31□□□□□ -1.08
TRIM4-204ENST00000447480 ODF2LQ9ULJ1 636 aa8.31□□□□□ -1.08
TRIM4-204ENST00000447480 ZBTB21Q9ULJ3 1066 aa8.31□□□□□ -1.08
TRIM4-204ENST00000447480 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.31□□□□□ -1.08
TRIM4-204ENST00000447480 PCDHAC2Q9Y5I4 1007 aa8.31□□□□□ -1.08
TRIM4-204ENST00000447480 TLL2Q9Y6L7 1015 aa8.31□□□□□ -1.08
TRIM4-204ENST00000447480 SIPA1L1O43166 1804 aa8.31□□□□□ -1.08
TRIM4-204ENST00000447480 OTOFQ9HC10 1997 aa8.3□□□□□ -1.08
TRIM4-204ENST00000447480 B4E1Z4 1266 aa8.3□□□□□ -1.08
TRIM4-204ENST00000447480 USP17L10C9JJH3 530 aa8.3□□□□□ -1.08
TRIM4-204ENST00000447480 CCDC188H7C350 402 aa8.3□□□□□ -1.08
TRIM4-204ENST00000447480 ZBTB24O43167 697 aaPredicted RBP8.3□□□□□ -1.08
TRIM4-204ENST00000447480 MGRN1O60291 552 aa8.3□□□□□ -1.08
TRIM4-204ENST00000447480 CETPP11597 493 aa8.3□□□□□ -1.08
TRIM4-204ENST00000447480 TRIM21P19474 475 aaKnown RBP8.3□□□□□ -1.08
TRIM4-204ENST00000447480 RASA1P20936 1047 aa8.3□□□□□ -1.08
TRIM4-204ENST00000447480 GBP1P32455 592 aa8.3□□□□□ -1.08
TRIM4-204ENST00000447480 SHMT1P34896 483 aa8.3□□□□□ -1.08
TRIM4-204ENST00000447480 ZNF157P51786 506 aaPredicted RBP8.3□□□□□ -1.08
TRIM4-204ENST00000447480 CTDSPL2Q05D32 466 aa8.3□□□□□ -1.08
TRIM4-204ENST00000447480 CCDC38Q502W7 563 aa8.3□□□□□ -1.08
TRIM4-204ENST00000447480 GPATCH4Q5T3I0 446 aaKnown RBP8.3□□□□□ -1.08
TRIM4-204ENST00000447480 IFIT1BQ5T764 474 aaKnown RBP8.3□□□□□ -1.08
TRIM4-204ENST00000447480 PRPF38BQ5VTL8 546 aaKnown RBP8.3□□□□□ -1.08
TRIM4-204ENST00000447480 KLHL10Q6JEL2 608 aa8.3□□□□□ -1.08
TRIM4-204ENST00000447480 C8orf74Q6P047 294 aa8.3□□□□□ -1.08
TRIM4-204ENST00000447480 CNNM4Q6P4Q7 775 aa8.3□□□□□ -1.08
TRIM4-204ENST00000447480 USP17L2Q6R6M4 530 aa8.3□□□□□ -1.08
TRIM4-204ENST00000447480 MIGA2Q7L4E1 593 aa8.3□□□□□ -1.08
TRIM4-204ENST00000447480 SH3BP5LQ7L8J4 393 aa8.3□□□□□ -1.08
TRIM4-204ENST00000447480 SAPCD2Q86UD0 394 aa8.3□□□□□ -1.08
TRIM4-204ENST00000447480 IRF2BP1Q8IU81 584 aa8.3□□□□□ -1.08
TRIM4-204ENST00000447480 TBC1D10CQ8IV04 446 aa8.3□□□□□ -1.08
TRIM4-204ENST00000447480 GBP7Q8N8V2 638 aaPredicted RBP8.3□□□□□ -1.08
TRIM4-204ENST00000447480 PROCA1Q8NCQ7 364 aaPredicted RBP8.3□□□□□ -1.08
TRIM4-204ENST00000447480 MYCBPAPQ8TBZ2 947 aa8.3□□□□□ -1.08
TRIM4-204ENST00000447480 TNFRSF25Q93038 417 aa8.3□□□□□ -1.08
TRIM4-204ENST00000447480 RSRC1Q96IZ7 334 aaKnown RBP8.3□□□□□ -1.08
TRIM4-204ENST00000447480 CCDC114Q96M63 670 aa8.3□□□□□ -1.08
TRIM4-204ENST00000447480 ZSCAN10Q96SZ4 725 aaPredicted RBP8.3□□□□□ -1.08
TRIM4-204ENST00000447480 NUDT12Q9BQG2 462 aa8.3□□□□□ -1.08
TRIM4-204ENST00000447480 LZTS2Q9BRK4 669 aa8.3□□□□□ -1.08
TRIM4-204ENST00000447480 TUBGCP2Q9BSJ2 902 aa8.3□□□□□ -1.08
TRIM4-204ENST00000447480 FAM129AQ9BZQ8 928 aa8.3□□□□□ -1.08
TRIM4-204ENST00000447480 ISCUQ9H1K1 167 aa8.3□□□□□ -1.08
TRIM4-204ENST00000447480 TMBIM4Q9HC24 238 aa8.3□□□□□ -1.08
TRIM4-204ENST00000447480 KBTBD4Q9NVX7 518 aa8.3□□□□□ -1.08
TRIM4-204ENST00000447480 STX8Q9UNK0 236 aa8.3□□□□□ -1.08
TRIM4-204ENST00000447480 CTNND2Q9UQB3 1225 aa8.3□□□□□ -1.08
TRIM4-204ENST00000447480 DIS3Q9Y2L1 958 aaKnown RBP8.3□□□□□ -1.08
TRIM4-204ENST00000447480 SLC45A1Q9Y2W3 748 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms