RNA–Protein interactions for RNA: ENST00000447283.6

GNE-203, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 5 BASIC

Gene GNE, Length 2,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-203ENST00000447283 CES2O00748 559 aa12.52□□□□□ -0.41
GNE-203ENST00000447283 KLRC1P26715 233 aa12.52□□□□□ -0.41
GNE-203ENST00000447283 HMGCS2P54868 508 aa12.52□□□□□ -0.41
GNE-203ENST00000447283 POLR2FP61218 127 aaKnown RBP12.52□□□□□ -0.41
GNE-203ENST00000447283 PPATQ06203 517 aa12.52□□□□□ -0.41
GNE-203ENST00000447283 DGKZQ13574 1117 aa12.52□□□□□ -0.41
GNE-203ENST00000447283 CFAP58Q5T655 872 aa12.52□□□□□ -0.41
GNE-203ENST00000447283 ICE2Q659A1 982 aa12.52□□□□□ -0.41
GNE-203ENST00000447283 KDM7AQ6ZMT4 941 aa12.52□□□□□ -0.41
GNE-203ENST00000447283 ERO1BQ86YB8 467 aa12.52□□□□□ -0.41
GNE-203ENST00000447283 ZC3H3Q8IXZ2 948 aaKnown RBP12.52□□□□□ -0.41
GNE-203ENST00000447283 WHAMMQ8TF30 809 aa12.52□□□□□ -0.41
GNE-203ENST00000447283 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.52□□□□□ -0.413e-10■■■■■ 88.3
GNE-203ENST00000447283 C12orf42Q96LP6 360 aa12.52□□□□□ -0.41
GNE-203ENST00000447283 ZNF408Q9H9D4 720 aa12.52□□□□□ -0.41
GNE-203ENST00000447283 ELP3Q9H9T3 547 aa12.52□□□□□ -0.41
GNE-203ENST00000447283 EPB41L5Q9HCM4 733 aa12.52□□□□□ -0.41
GNE-203ENST00000447283 PANK4Q9NVE7 773 aa12.52□□□□□ -0.41
GNE-203ENST00000447283 FBXO28Q9NVF7 368 aa12.52□□□□□ -0.41
GNE-203ENST00000447283 TMOD4Q9NZQ9 345 aa12.52□□□□□ -0.41
GNE-203ENST00000447283 NFU1Q9UMS0 254 aa12.52□□□□□ -0.41
GNE-203ENST00000447283 ZNF233A6NK53 670 aa12.51□□□□□ -0.41
GNE-203ENST00000447283 FAM153BP0C7A2 387 aa12.51□□□□□ -0.41
GNE-203ENST00000447283 MYBP10242 640 aa12.51□□□□□ -0.41
GNE-203ENST00000447283 ERCC3P19447 782 aa12.51□□□□□ -0.41
GNE-203ENST00000447283 CLK2P49760 499 aaKnown RBP12.51□□□□□ -0.41
GNE-203ENST00000447283 SNAP25P60880 206 aa12.51□□□□□ -0.41
GNE-203ENST00000447283 GUCY2DQ02846 1103 aa12.51□□□□□ -0.41
GNE-203ENST00000447283 TRAF1Q13077 416 aa12.51□□□□□ -0.41
GNE-203ENST00000447283 FAM153CQ494X1 144 aa12.51□□□□□ -0.41
GNE-203ENST00000447283 FBXO11Q86XK2 927 aa12.51□□□□□ -0.41
GNE-203ENST00000447283 EIF1ADQ8N9N8 165 aaKnown RBP12.51□□□□□ -0.41
GNE-203ENST00000447283 PIK3R5Q8WYR1 880 aa12.51□□□□□ -0.41
GNE-203ENST00000447283 TBC1D5Q92609 795 aa12.51□□□□□ -0.41
GNE-203ENST00000447283 HAS1Q92839 578 aa12.51□□□□□ -0.41
GNE-203ENST00000447283 CLMNQ96JQ2 1002 aa12.51□□□□□ -0.41
GNE-203ENST00000447283 CCDC43Q96MW1 224 aaKnown RBP12.51□□□□□ -0.41
GNE-203ENST00000447283 NT5C3AQ9H0P0 336 aa12.51□□□□□ -0.41
GNE-203ENST00000447283 RPAP3Q9H6T3 665 aaPredicted RBP12.51□□□□□ -0.41
GNE-203ENST00000447283 FAM153AQ9UHL3 310 aa12.51□□□□□ -0.41
GNE-203ENST00000447283 PCDHA2Q9Y5H9 948 aa12.51□□□□□ -0.41
GNE-203ENST00000447283 KDM3AQ9Y4C1 1321 aa12.51□□□□□ -0.41
GNE-203ENST00000447283 A0A087X0T9 212 aa12.5□□□□□ -0.41
GNE-203ENST00000447283 UNCXA6NJT0 531 aa12.5□□□□□ -0.41
GNE-203ENST00000447283 FTCDO95954 541 aa12.5□□□□□ -0.41
GNE-203ENST00000447283 KRT14P02533 472 aa12.5□□□□□ -0.41
GNE-203ENST00000447283 FAM228BP0C875 321 aa12.5□□□□□ -0.41
GNE-203ENST00000447283 GCFC2P16383 781 aaKnown RBP12.5□□□□□ -0.41
GNE-203ENST00000447283 SKIDA1Q1XH10 827 aa12.5□□□□□ -0.41
GNE-203ENST00000447283 SH3D19Q5HYK7 790 aa12.5□□□□□ -0.41
GNE-203ENST00000447283 LDLRAD1Q5T700 205 aa12.5□□□□□ -0.41
GNE-203ENST00000447283 GANQ9H2C0 597 aa12.5□□□□□ -0.41
GNE-203ENST00000447283 RANBP17Q9H2T7 1088 aaKnown RBP12.5□□□□□ -0.41
GNE-203ENST00000447283 BMP2KQ9NSY1 1161 aaPredicted RBP12.5□□□□□ -0.41
GNE-203ENST00000447283 TMEM59LQ9UK28 342 aa12.5□□□□□ -0.41
GNE-203ENST00000447283 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.5□□□□□ -0.41
GNE-203ENST00000447283 SLC26A4O43511 780 aa12.5□□□□□ -0.41
GNE-203ENST00000447283 FLOT1O75955 427 aa12.5□□□□□ -0.41
GNE-203ENST00000447283 ERLIN2O94905 339 aa12.5□□□□□ -0.41
GNE-203ENST00000447283 MRPL12P52815 198 aaKnown RBP12.5□□□□□ -0.41
GNE-203ENST00000447283 PDCLQ13371 301 aa12.5□□□□□ -0.41
GNE-203ENST00000447283 KIAA0753Q2KHM9 967 aa12.5□□□□□ -0.41
GNE-203ENST00000447283 B4GALNT4Q76KP1 1039 aa12.5□□□□□ -0.41
GNE-203ENST00000447283 SPATS2Q86XZ4 545 aaKnown RBP12.5□□□□□ -0.41
GNE-203ENST00000447283 CCDC65Q8IXS2 484 aa12.5□□□□□ -0.41
GNE-203ENST00000447283 MICALL1Q8N3F8 863 aa12.5□□□□□ -0.41
GNE-203ENST00000447283 USP38Q8NB14 1042 aa12.5□□□□□ -0.41
GNE-203ENST00000447283 CASKIN2Q8WXE0 1202 aa12.5□□□□□ -0.41
GNE-203ENST00000447283 KRT12Q99456 494 aa12.5□□□□□ -0.41
GNE-203ENST00000447283 GLT8D2Q9H1C3 349 aa12.5□□□□□ -0.41
GNE-203ENST00000447283 KCTD10Q9H3F6 313 aa12.5□□□□□ -0.41
GNE-203ENST00000447283 PSTPIP2Q9H939 334 aa12.5□□□□□ -0.41
GNE-203ENST00000447283 DDX25Q9UHL0 483 aaKnown RBP12.5□□□□□ -0.41
GNE-203ENST00000447283 ZSCAN5CA6NGD5 496 aaPredicted RBP12.49□□□□□ -0.41
GNE-203ENST00000447283 SPDYE5A6NIY4 337 aa12.49□□□□□ -0.41
GNE-203ENST00000447283 IRF6O14896 467 aa12.49□□□□□ -0.41
GNE-203ENST00000447283 TNNC1P63316 161 aa12.49□□□□□ -0.41
GNE-203ENST00000447283 FKBP1BP68106 108 aa12.49□□□□□ -0.41
GNE-203ENST00000447283 KLHL30Q0D2K2 578 aa12.49□□□□□ -0.41
GNE-203ENST00000447283 RAPGEF1Q13905 1077 aa12.49□□□□□ -0.41
GNE-203ENST00000447283 USH1GQ495M9 461 aa12.49□□□□□ -0.41
GNE-203ENST00000447283 C10orf76Q5T2E6 689 aa12.49□□□□□ -0.41
GNE-203ENST00000447283 PPP4R3CPQ6ZMV5 832 aa12.49□□□□□ -0.41
GNE-203ENST00000447283 SUGP1Q8IWZ8 645 aaKnown RBP12.49□□□□□ -0.41
GNE-203ENST00000447283 SH2D3CQ8N5H7 860 aa12.49□□□□□ -0.41
GNE-203ENST00000447283 IFT81Q8WYA0 676 aa12.49□□□□□ -0.41
GNE-203ENST00000447283 CUL5Q93034 780 aa12.49□□□□□ -0.41
GNE-203ENST00000447283 SLC10A4Q96EP9 437 aa12.49□□□□□ -0.41
GNE-203ENST00000447283 OTUD5Q96G74 571 aa12.49□□□□□ -0.41
GNE-203ENST00000447283 PAGR1Q9BTK6 254 aa12.49□□□□□ -0.41
GNE-203ENST00000447283 ESYT3A0FGR9 886 aa12.49□□□□□ -0.41
GNE-203ENST00000447283 NDUFAB1O14561 156 aa12.49□□□□□ -0.41
GNE-203ENST00000447283 CXCL11O14625 94 aa12.49□□□□□ -0.41
GNE-203ENST00000447283 HSPA9P38646 679 aaKnown RBP12.49□□□□□ -0.41
GNE-203ENST00000447283 ASIC2Q16515 512 aa12.49□□□□□ -0.41
GNE-203ENST00000447283 EDRF1Q3B7T1 1238 aa12.49□□□□□ -0.41
GNE-203ENST00000447283 TTC19Q6DKK2 380 aaPredicted RBP12.49□□□□□ -0.41
GNE-203ENST00000447283 CCDC174Q6PII3 467 aa12.49□□□□□ -0.41
GNE-203ENST00000447283 C2orf69Q8N8R5 385 aa12.49□□□□□ -0.41
GNE-203ENST00000447283 IPO4Q8TEX9 1081 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms