RNA–Protein interactions for RNA: ENST00000447275.7

PDE4C-203, Transcript of phosphodiesterase 4C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4C, Length 2,542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-203ENST00000447275 KCTD19Q17RG1 926 aaPredicted RBP12.56□□□□□ -0.4
PDE4C-203ENST00000447275 CERKLQ49MI3 558 aaPredicted RBP12.56□□□□□ -0.4
PDE4C-203ENST00000447275 TMC3Q7Z5M5 1100 aa12.56□□□□□ -0.4
PDE4C-203ENST00000447275 GLIS3Q8NEA6 775 aa12.56□□□□□ -0.4
PDE4C-203ENST00000447275 SUPT20HQ8NEM7 779 aa12.56□□□□□ -0.4
PDE4C-203ENST00000447275 PBKQ96KB5 322 aa12.56□□□□□ -0.4
PDE4C-203ENST00000447275 CALR3Q96L12 384 aaKnown RBP12.56□□□□□ -0.4
PDE4C-203ENST00000447275 LSM14BQ9BX40 385 aaKnown RBP12.56□□□□□ -0.4
PDE4C-203ENST00000447275 GOLPH3Q9H4A6 298 aa12.56□□□□□ -0.4
PDE4C-203ENST00000447275 NOD2Q9HC29 1040 aa12.56□□□□□ -0.4
PDE4C-203ENST00000447275 ZNF277Q9NRM2 450 aaPredicted RBP12.56□□□□□ -0.4
PDE4C-203ENST00000447275 ESYT2A0FGR8 921 aa12.56□□□□□ -0.4
PDE4C-203ENST00000447275 USP17L10C9JJH3 530 aa12.56□□□□□ -0.4
PDE4C-203ENST00000447275 DAPK3O43293 454 aa12.56□□□□□ -0.4
PDE4C-203ENST00000447275 PPP1R12BO60237 982 aaPredicted RBP12.56□□□□□ -0.4
PDE4C-203ENST00000447275 NPM3O75607 178 aaKnown RBP12.56□□□□□ -0.4
PDE4C-203ENST00000447275 GNA11P29992 359 aa12.56□□□□□ -0.4
PDE4C-203ENST00000447275 JAG1P78504 1218 aa12.56□□□□□ -0.4
PDE4C-203ENST00000447275 GRB10Q13322 594 aa12.56□□□□□ -0.4
PDE4C-203ENST00000447275 SEPT2Q15019 361 aa12.56□□□□□ -0.4
PDE4C-203ENST00000447275 PPP2R5AQ15172 486 aa12.56□□□□□ -0.4
PDE4C-203ENST00000447275 LRRC41Q15345 812 aa12.56□□□□□ -0.4
PDE4C-203ENST00000447275 KRT71Q3SY84 523 aa12.56□□□□□ -0.4
PDE4C-203ENST00000447275 ERMARDQ5T6L9 678 aa12.56□□□□□ -0.4
PDE4C-203ENST00000447275 CC2D2BQ6DHV5 1058 aa12.56□□□□□ -0.4
PDE4C-203ENST00000447275 KRT25Q7Z3Z0 450 aa12.56□□□□□ -0.4
PDE4C-203ENST00000447275 CHMP6Q96FZ7 201 aa12.56□□□□□ -0.4
PDE4C-203ENST00000447275 DDX47Q9H0S4 455 aaKnown RBP12.56□□□□□ -0.4
PDE4C-203ENST00000447275 FRMD3A2A2Y4 597 aa12.55□□□□□ -0.4
PDE4C-203ENST00000447275 CCT8L1PA6NM43 557 aa12.55□□□□□ -0.4
PDE4C-203ENST00000447275 RPSAP08865 295 aaKnown RBP12.55□□□□□ -0.4
PDE4C-203ENST00000447275 ZBTB48P10074 688 aaPredicted RBP12.55□□□□□ -0.4
PDE4C-203ENST00000447275 BAG6P46379 1132 aa12.55□□□□□ -0.4
PDE4C-203ENST00000447275 KLHL30Q0D2K2 578 aa12.55□□□□□ -0.4
PDE4C-203ENST00000447275 RAPGEF1Q13905 1077 aa12.55□□□□□ -0.4
PDE4C-203ENST00000447275 ENOX2Q16206 610 aaKnown RBP12.55□□□□□ -0.4
PDE4C-203ENST00000447275 ACCSLQ4AC99 568 aa12.55□□□□□ -0.4
PDE4C-203ENST00000447275 HIBCHQ6NVY1 386 aaPredicted RBP12.55□□□□□ -0.4
PDE4C-203ENST00000447275 SIAH1Q8IUQ4 282 aa12.55□□□□□ -0.4
PDE4C-203ENST00000447275 KIRREL3Q8IZU9 778 aa12.55□□□□□ -0.4
PDE4C-203ENST00000447275 MDM1Q8TC05 714 aa12.55□□□□□ -0.4
PDE4C-203ENST00000447275 TBCKQ8TEA7 893 aa12.55□□□□□ -0.4
PDE4C-203ENST00000447275 CCDC17Q96LX7 622 aa12.55□□□□□ -0.4
PDE4C-203ENST00000447275 XPO6Q96QU8 1125 aaKnown RBP12.55□□□□□ -0.4
PDE4C-203ENST00000447275 PSMD1Q99460 953 aa12.55□□□□□ -0.4
PDE4C-203ENST00000447275 RIC8AQ9NPQ8 531 aa12.55□□□□□ -0.4
PDE4C-203ENST00000447275 ZBTB12Q9Y330 459 aaPredicted RBP12.55□□□□□ -0.4
PDE4C-203ENST00000447275 COL4A3BPQ9Y5P4 624 aa12.55□□□□□ -0.4
PDE4C-203ENST00000447275 MYH7BA7E2Y1 1941 aa12.55□□□□□ -0.4
PDE4C-203ENST00000447275 BTNL10A8MVZ5 291 aa12.55□□□□□ -0.4
PDE4C-203ENST00000447275 F8VZ95 297 aa12.55□□□□□ -0.4
PDE4C-203ENST00000447275 hCG_1984214I3L0E3 225 aa12.55□□□□□ -0.4
PDE4C-203ENST00000447275 NEBLO76041 1014 aa12.55□□□□□ -0.4
PDE4C-203ENST00000447275 RRP1BQ14684 758 aaKnown RBP12.55□□□□□ -0.4
PDE4C-203ENST00000447275 PPP1R7Q15435 360 aa12.55□□□□□ -0.4
PDE4C-203ENST00000447275 TATDN1Q6P1N9 297 aa12.55□□□□□ -0.4
PDE4C-203ENST00000447275 REXO1Q8N1G1 1221 aaKnown RBP12.55□□□□□ -0.4
PDE4C-203ENST00000447275 ZNF713Q8N859 430 aaPredicted RBP12.55□□□□□ -0.4
PDE4C-203ENST00000447275 FAM133AQ8N9E0 248 aa12.55□□□□□ -0.4
PDE4C-203ENST00000447275 LRRC57Q8N9N7 239 aa12.55□□□□□ -0.4
PDE4C-203ENST00000447275 CUL5Q93034 780 aa12.55□□□□□ -0.4
PDE4C-203ENST00000447275 TLCD1Q96CP7 247 aa12.55□□□□□ -0.4
PDE4C-203ENST00000447275 PNMA5Q96PV4 448 aa12.55□□□□□ -0.4
PDE4C-203ENST00000447275 TSG101Q99816 390 aa12.55□□□□□ -0.4
PDE4C-203ENST00000447275 TRIM6Q9C030 488 aaPredicted RBP12.55□□□□□ -0.4
PDE4C-203ENST00000447275 CNOT10Q9H9A5 744 aaKnown RBP12.55□□□□□ -0.4
PDE4C-203ENST00000447275 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.55□□□□□ -0.4
PDE4C-203ENST00000447275 AIPL1Q9NZN9 384 aa12.55□□□□□ -0.4
PDE4C-203ENST00000447275 AMACRQ9UHK6 382 aa12.55□□□□□ -0.4
PDE4C-203ENST00000447275 CLRN2A0PK11 232 aa12.54□□□□□ -0.4
PDE4C-203ENST00000447275 PGRMC1O00264 195 aaKnown RBP12.54□□□□□ -0.4
PDE4C-203ENST00000447275 PPP1R12AO14974 1030 aaPredicted RBP12.54□□□□□ -0.4
PDE4C-203ENST00000447275 ITGA4P13612 1032 aa12.54□□□□□ -0.4
PDE4C-203ENST00000447275 GBP2P32456 591 aaPredicted RBP12.54□□□□□ -0.4
PDE4C-203ENST00000447275 DHX9Q08211 1270 aaKnown RBP12.54□□□□□ -0.4
PDE4C-203ENST00000447275 ZCWPW2Q504Y3 356 aa12.54□□□□□ -0.4
PDE4C-203ENST00000447275 CHADLQ6NUI6 762 aa12.54□□□□□ -0.4
PDE4C-203ENST00000447275 FOXR2Q6PJQ5 311 aa12.54□□□□□ -0.4
PDE4C-203ENST00000447275 NEK8Q86SG6 692 aa12.54□□□□□ -0.4
PDE4C-203ENST00000447275 FMNL3Q8IVF7 1028 aa12.54□□□□□ -0.4
PDE4C-203ENST00000447275 METTL13Q8N6R0 699 aa12.54□□□□□ -0.4
PDE4C-203ENST00000447275 CCDC197Q8NCU1 140 aa12.54□□□□□ -0.4
PDE4C-203ENST00000447275 LARP4BQ92615 738 aaKnown RBP12.54□□□□□ -0.4
PDE4C-203ENST00000447275 CENPTQ96BT3 561 aa12.54□□□□□ -0.4
PDE4C-203ENST00000447275 TBC1D31Q96DN5 1066 aa12.54□□□□□ -0.4
PDE4C-203ENST00000447275 ZNF317Q96PQ6 595 aaPredicted RBP12.54□□□□□ -0.4
PDE4C-203ENST00000447275 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.54□□□□□ -0.42e-6■■■■□ 23.5
PDE4C-203ENST00000447275 STK17AQ9UEE5 414 aa12.54□□□□□ -0.4
PDE4C-203ENST00000447275 BAIAP2L1Q9UHR4 511 aa12.54□□□□□ -0.4
PDE4C-203ENST00000447275 NOC2LQ9Y3T9 749 aaKnown RBP12.54□□□□□ -0.4
PDE4C-203ENST00000447275 KIF13BQ9NQT8 1826 aa12.54□□□□□ -0.4
PDE4C-203ENST00000447275 PNMA6FA0A0J9YX94 578 aa12.54□□□□□ -0.4
PDE4C-203ENST00000447275 TCP10L2B9ZVM9 353 aa12.54□□□□□ -0.4
PDE4C-203ENST00000447275 KRIT1O00522 736 aa12.54□□□□□ -0.4
PDE4C-203ENST00000447275 EDIL3O43854 480 aa12.54□□□□□ -0.4
PDE4C-203ENST00000447275 CTNND1O60716 968 aaKnown RBP12.54□□□□□ -0.4
PDE4C-203ENST00000447275 ADCY7P51828 1080 aa12.54□□□□□ -0.4
PDE4C-203ENST00000447275 SLC8A3P57103 927 aa12.54□□□□□ -0.4
PDE4C-203ENST00000447275 FKBP3Q00688 224 aaKnown RBP12.54□□□□□ -0.4
PDE4C-203ENST00000447275 NAA25Q14CX7 972 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms