RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 RIT2Q99578 217 aa20.56■□□□□ 0.88
COL9A1-205ENST00000447041 TEKT3Q9BXF9 490 aa20.56■□□□□ 0.88
COL9A1-205ENST00000447041 EPHX3Q9H6B9 360 aa20.56■□□□□ 0.88
COL9A1-205ENST00000447041 CLDND1Q9NY35 253 aa20.56■□□□□ 0.88
COL9A1-205ENST00000447041 RAPGEFL1Q9UHV5 662 aa20.56■□□□□ 0.88
COL9A1-205ENST00000447041 PLAGL2Q9UPG8 496 aa20.56■□□□□ 0.88
COL9A1-205ENST00000447041 GPR182O15218 404 aa20.55■□□□□ 0.88
COL9A1-205ENST00000447041 DNAJB1P25685 340 aa20.55■□□□□ 0.88
COL9A1-205ENST00000447041 HYAL1Q12794 435 aa20.55■□□□□ 0.88
COL9A1-205ENST00000447041 Q4G0T1 1027 aa20.55■□□□□ 0.88
COL9A1-205ENST00000447041 EFCAB12Q6NXP0 572 aa20.55■□□□□ 0.88
COL9A1-205ENST00000447041 DAGLBQ8NCG7 672 aa20.55■□□□□ 0.88
COL9A1-205ENST00000447041 P2RX5Q93086 422 aa20.55■□□□□ 0.88
COL9A1-205ENST00000447041 C22orf23Q9BZE7 217 aa20.55■□□□□ 0.88
COL9A1-205ENST00000447041 RGS18Q9NS28 235 aa20.55■□□□□ 0.88
COL9A1-205ENST00000447041 AKT3Q9Y243 479 aa20.55■□□□□ 0.88
COL9A1-205ENST00000447041 PCDHB7Q9Y5E2 793 aa20.55■□□□□ 0.88
COL9A1-205ENST00000447041 GRXCR2A6NFK2 248 aa20.54■□□□□ 0.88
COL9A1-205ENST00000447041 C9IYK1 514 aa20.54■□□□□ 0.88
COL9A1-205ENST00000447041 MAGEB2O15479 319 aa20.54■□□□□ 0.88
COL9A1-205ENST00000447041 DTNBO60941 627 aa20.54■□□□□ 0.88
COL9A1-205ENST00000447041 PSMD10O75832 226 aa20.54■□□□□ 0.88
COL9A1-205ENST00000447041 ITGB1P05556 798 aa20.54■□□□□ 0.88
COL9A1-205ENST00000447041 SFNP31947 248 aa20.54■□□□□ 0.88
COL9A1-205ENST00000447041 GTF2F1P35269 517 aaKnown RBP eCLIP20.54■□□□□ 0.88
COL9A1-205ENST00000447041 JAK3P52333 1124 aa20.54■□□□□ 0.88
COL9A1-205ENST00000447041 SCRN1Q12765 414 aa20.54■□□□□ 0.88
COL9A1-205ENST00000447041 ODR4Q5SWX8 454 aa20.54■□□□□ 0.88
COL9A1-205ENST00000447041 CPLX2Q6PUV4 134 aaKnown RBP20.54■□□□□ 0.88
COL9A1-205ENST00000447041 FAM178BQ8IXR5 827 aa20.54■□□□□ 0.88
COL9A1-205ENST00000447041 KLHL23Q8NBE8 558 aa20.54■□□□□ 0.88
COL9A1-205ENST00000447041 ZNF668Q96K58 619 aaPredicted RBP20.54■□□□□ 0.88
COL9A1-205ENST00000447041 C1orf112Q9NSG2 853 aa20.54■□□□□ 0.88
COL9A1-205ENST00000447041 KCNJ14Q9UNX9 436 aa20.54■□□□□ 0.88
COL9A1-205ENST00000447041 CYP3A7-CYP3A51PA0A087WV96 503 aa20.53■□□□□ 0.88
COL9A1-205ENST00000447041 CYP3A7P24462 503 aa20.53■□□□□ 0.88
COL9A1-205ENST00000447041 LTBRP36941 435 aa20.53■□□□□ 0.88
COL9A1-205ENST00000447041 NLRP11P59045 1033 aaKnown RBP20.53■□□□□ 0.88
COL9A1-205ENST00000447041 FAM102BQ5T8I3 360 aa20.53■□□□□ 0.88
COL9A1-205ENST00000447041 SLC24A5Q71RS6 500 aa20.53■□□□□ 0.88
COL9A1-205ENST00000447041 MAP7D2Q96T17 732 aa20.53■□□□□ 0.88
COL9A1-205ENST00000447041 C1QTNF1Q9BXJ1 281 aa20.53■□□□□ 0.88
COL9A1-205ENST00000447041 NRBP2Q9NSY0 501 aa20.53■□□□□ 0.88
COL9A1-205ENST00000447041 HCSTQ9UBK5 93 aa20.53■□□□□ 0.88
COL9A1-205ENST00000447041 MYO7AQ13402 2215 aa20.53■□□□□ 0.88
COL9A1-205ENST00000447041 TBKBP1A7MCY6 615 aa20.52■□□□□ 0.88
COL9A1-205ENST00000447041 IRS1P35568 1242 aa20.52■□□□□ 0.88
COL9A1-205ENST00000447041 DLX2Q07687 328 aaPredicted RBP20.52■□□□□ 0.88
COL9A1-205ENST00000447041 DSC3Q14574 896 aa20.52■□□□□ 0.88
COL9A1-205ENST00000447041 NONOQ15233 471 aaKnown RBP eCLIP20.52■□□□□ 0.88
COL9A1-205ENST00000447041 INF2Q27J81 1249 aa20.52■□□□□ 0.88
COL9A1-205ENST00000447041 CTC1Q2NKJ3 1217 aa20.52■□□□□ 0.88
COL9A1-205ENST00000447041 PUS10Q3MIT2 529 aaKnown RBP20.52■□□□□ 0.88
COL9A1-205ENST00000447041 B3GNT9Q6UX72 402 aa20.52■□□□□ 0.88
COL9A1-205ENST00000447041 MIER3Q7Z3K6 550 aa20.52■□□□□ 0.88
COL9A1-205ENST00000447041 ETNPPLQ8TBG4 499 aa20.52■□□□□ 0.88
COL9A1-205ENST00000447041 SPPL3Q8TCT6 385 aa20.52■□□□□ 0.88
COL9A1-205ENST00000447041 MBOAT7Q96N66 472 aa20.52■□□□□ 0.88
COL9A1-205ENST00000447041 ADAMTS10Q9H324 1103 aa20.52■□□□□ 0.88
COL9A1-205ENST00000447041 TMEM150BA6NC51 233 aa20.51■□□□□ 0.87
COL9A1-205ENST00000447041 LINC01565O15544 149 aa20.51■□□□□ 0.87
COL9A1-205ENST00000447041 SLC37A4O43826 429 aa20.51■□□□□ 0.87
COL9A1-205ENST00000447041 TBX10O75333 385 aa20.51■□□□□ 0.87
COL9A1-205ENST00000447041 FGFR1P11362 822 aa20.51■□□□□ 0.87
COL9A1-205ENST00000447041 TMOD1P28289 359 aa20.51■□□□□ 0.87
COL9A1-205ENST00000447041 GPC3P51654 580 aa20.51■□□□□ 0.87
COL9A1-205ENST00000447041 CLUL1Q15846 466 aa20.51■□□□□ 0.87
COL9A1-205ENST00000447041 NAALADL2Q58DX5 795 aa20.51■□□□□ 0.87
COL9A1-205ENST00000447041 GALNT17Q6IS24 598 aa20.51■□□□□ 0.87
COL9A1-205ENST00000447041 MOXD1Q6UVY6 613 aa20.51■□□□□ 0.87
COL9A1-205ENST00000447041 ADGRD2Q7Z7M1 963 aa20.51■□□□□ 0.87
COL9A1-205ENST00000447041 FAM177A1Q8N128 213 aaPredicted RBP20.51■□□□□ 0.87
COL9A1-205ENST00000447041 RDM1Q8NG50 284 aa20.51■□□□□ 0.87
COL9A1-205ENST00000447041 POF1BQ8WVV4 589 aa20.51■□□□□ 0.87
COL9A1-205ENST00000447041 PHF20Q9BVI0 1012 aa20.51■□□□□ 0.87
COL9A1-205ENST00000447041 IGFLR1Q9H665 355 aa20.51■□□□□ 0.87
COL9A1-205ENST00000447041 SEPT9Q9UHD8 586 aaPredicted RBP20.51■□□□□ 0.87
COL9A1-205ENST00000447041 TPCN1Q9ULQ1 816 aa20.51■□□□□ 0.87
COL9A1-205ENST00000447041 TBC1D8BQ0IIM8 1120 aa20.5■□□□□ 0.87
COL9A1-205ENST00000447041 DRP2Q13474 957 aa20.5■□□□□ 0.87
COL9A1-205ENST00000447041 TARBP2Q15633 366 aaKnown RBP20.5■□□□□ 0.87
COL9A1-205ENST00000447041 MTERF2Q49AM1 385 aa20.5■□□□□ 0.87
COL9A1-205ENST00000447041 SPOUT1Q5T280 376 aaKnown RBP20.5■□□□□ 0.87
COL9A1-205ENST00000447041 FAM43BQ6ZT52 329 aaPredicted RBP20.5■□□□□ 0.87
COL9A1-205ENST00000447041 KRT25Q7Z3Z0 450 aa20.5■□□□□ 0.87
COL9A1-205ENST00000447041 GJD3Q8N144 294 aa20.5■□□□□ 0.87
COL9A1-205ENST00000447041 SH2D3AQ9BRG2 576 aa20.5■□□□□ 0.87
COL9A1-205ENST00000447041 SLKQ9H2G2 1235 aaPredicted RBP20.5■□□□□ 0.87
COL9A1-205ENST00000447041 GJB4Q9NTQ9 266 aa20.5■□□□□ 0.87
COL9A1-205ENST00000447041 TMEM161AQ9NX61 479 aa20.5■□□□□ 0.87
COL9A1-205ENST00000447041 DDX25Q9UHL0 483 aaKnown RBP20.5■□□□□ 0.87
COL9A1-205ENST00000447041 PCDHGC5Q9Y5F6 944 aa20.5■□□□□ 0.87
COL9A1-205ENST00000447041 STK36Q9NRP7 1315 aa20.5■□□□□ 0.87
COL9A1-205ENST00000447041 NCK2O43639 380 aa20.49■□□□□ 0.87
COL9A1-205ENST00000447041 CDKL5O76039 1030 aa20.49■□□□□ 0.87
COL9A1-205ENST00000447041 STBD1O95210 358 aa20.49■□□□□ 0.87
COL9A1-205ENST00000447041 FGFR4P22455 802 aa20.49■□□□□ 0.87
COL9A1-205ENST00000447041 EIF4BP23588 611 aaKnown RBP20.49■□□□□ 0.87
COL9A1-205ENST00000447041 SSTR3P32745 418 aaPredicted RBP20.49■□□□□ 0.87
COL9A1-205ENST00000447041 FAM189BP81408 668 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms