RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 HSPA8P11142 646 aaKnown RBP9.41□□□□□ -0.9
SMARCE1-206ENST00000447024 MCAMP43121 646 aa9.41□□□□□ -0.9
SMARCE1-206ENST00000447024 TEKQ02763 1124 aa9.41□□□□□ -0.9
SMARCE1-206ENST00000447024 CHRNEQ04844 493 aa9.41□□□□□ -0.9
SMARCE1-206ENST00000447024 TMEM201Q5SNT2 666 aa9.41□□□□□ -0.9
SMARCE1-206ENST00000447024 CDC42EP5Q6NZY7 148 aa9.41□□□□□ -0.9
SMARCE1-206ENST00000447024 SPPL2CQ8IUH8 684 aa9.41□□□□□ -0.9
SMARCE1-206ENST00000447024 NSUN4Q96CB9 384 aaKnown RBP9.41□□□□□ -0.9
SMARCE1-206ENST00000447024 EAF2Q96CJ1 260 aaPredicted RBP9.41□□□□□ -0.9
SMARCE1-206ENST00000447024 DUSP9Q99956 384 aaKnown RBP9.41□□□□□ -0.9
SMARCE1-206ENST00000447024 TMEM39BQ9GZU3 492 aa9.41□□□□□ -0.9
SMARCE1-206ENST00000447024 LRP2BPQ9P2M1 347 aa9.41□□□□□ -0.9
SMARCE1-206ENST00000447024 DBNLQ9UJU6 430 aaKnown RBP9.41□□□□□ -0.9
SMARCE1-206ENST00000447024 EXOC6BQ9Y2D4 811 aa9.41□□□□□ -0.9
SMARCE1-206ENST00000447024 SSC5DA1L4H1 1573 aa9.41□□□□□ -0.9
SMARCE1-206ENST00000447024 AOX1Q06278 1338 aa9.4□□□□□ -0.9
SMARCE1-206ENST00000447024 RBM47A0AV96 593 aaKnown RBP9.4□□□□□ -0.9
SMARCE1-206ENST00000447024 SHISA3A0PJX4 238 aa9.4□□□□□ -0.9
SMARCE1-206ENST00000447024 BAG3O95817 575 aa9.4□□□□□ -0.9
SMARCE1-206ENST00000447024 BMP7P18075 431 aa9.4□□□□□ -0.9
SMARCE1-206ENST00000447024 GALK1P51570 392 aa9.4□□□□□ -0.9
SMARCE1-206ENST00000447024 MECOMQ03112 1051 aa9.4□□□□□ -0.9
SMARCE1-206ENST00000447024 DUSP4Q13115 394 aa9.4□□□□□ -0.9
SMARCE1-206ENST00000447024 SNX17Q15036 470 aa9.4□□□□□ -0.9
SMARCE1-206ENST00000447024 TTF1Q15361 905 aaPredicted RBP9.4□□□□□ -0.9
SMARCE1-206ENST00000447024 OTUD7BQ6GQQ9 843 aa9.4□□□□□ -0.9
SMARCE1-206ENST00000447024 MOB2Q70IA6 237 aa9.4□□□□□ -0.9
SMARCE1-206ENST00000447024 AACSQ86V21 672 aa9.4□□□□□ -0.9
SMARCE1-206ENST00000447024 SIRT2Q8IXJ6 389 aa9.4□□□□□ -0.9
SMARCE1-206ENST00000447024 ANKS4BQ8N8V4 417 aa9.4□□□□□ -0.9
SMARCE1-206ENST00000447024 RELTQ969Z4 430 aa9.4□□□□□ -0.9
SMARCE1-206ENST00000447024 SHISA4Q96DD7 197 aa9.4□□□□□ -0.9
SMARCE1-206ENST00000447024 NOL10Q9BSC4 688 aaKnown RBP9.4□□□□□ -0.9
SMARCE1-206ENST00000447024 SGPP1Q9BX95 441 aa9.4□□□□□ -0.9
SMARCE1-206ENST00000447024 ZCCHC4Q9H5U6 513 aa9.4□□□□□ -0.9
SMARCE1-206ENST00000447024 USP40Q9NVE5 1235 aa9.4□□□□□ -0.9
SMARCE1-206ENST00000447024 SCAF8Q9UPN6 1271 aaKnown RBP9.4□□□□□ -0.9
SMARCE1-206ENST00000447024 COL2A1P02458 1487 aaPredicted RBP9.4□□□□□ -0.91
SMARCE1-206ENST00000447024 PSPNO60542 156 aa9.39□□□□□ -0.91
SMARCE1-206ENST00000447024 IFIT2P09913 472 aaKnown RBP9.39□□□□□ -0.91
SMARCE1-206ENST00000447024 LBX1P52954 281 aa9.39□□□□□ -0.91
SMARCE1-206ENST00000447024 RRP1P56182 461 aaKnown RBP9.39□□□□□ -0.91
SMARCE1-206ENST00000447024 KCNA1Q09470 495 aa9.39□□□□□ -0.91
SMARCE1-206ENST00000447024 SLFN12Q8IYM2 578 aa9.39□□□□□ -0.91
SMARCE1-206ENST00000447024 PHC3Q8NDX5 983 aa9.39□□□□□ -0.91
SMARCE1-206ENST00000447024 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.39□□□□□ -0.91
SMARCE1-206ENST00000447024 WNK4Q96J92 1243 aa9.39□□□□□ -0.91
SMARCE1-206ENST00000447024 KREMEN1Q96MU8 473 aa9.39□□□□□ -0.91
SMARCE1-206ENST00000447024 ZNF341Q9BYN7 854 aa9.39□□□□□ -0.91
SMARCE1-206ENST00000447024 RAI14Q9P0K7 980 aa9.39□□□□□ -0.91
SMARCE1-206ENST00000447024 ZNF112Q9UJU3 913 aa9.39□□□□□ -0.91
SMARCE1-206ENST00000447024 LAMB1P07942 1786 aa9.39□□□□□ -0.91
SMARCE1-206ENST00000447024 AK9Q5TCS8 1911 aa9.39□□□□□ -0.91
SMARCE1-206ENST00000447024 RFX7Q2KHR2 1363 aa9.38□□□□□ -0.91
SMARCE1-206ENST00000447024 ATRNL1Q5VV63 1379 aa9.38□□□□□ -0.91
SMARCE1-206ENST00000447024 A0A0G2JLL6 359 aaPredicted RBP9.38□□□□□ -0.91
SMARCE1-206ENST00000447024 BTDP43251 543 aa9.38□□□□□ -0.91
SMARCE1-206ENST00000447024 RHBDL3P58872 404 aa9.38□□□□□ -0.91
SMARCE1-206ENST00000447024 MAP3K12Q12852 859 aa9.38□□□□□ -0.91
SMARCE1-206ENST00000447024 PRKG1Q13976 671 aa9.38□□□□□ -0.91
SMARCE1-206ENST00000447024 NOL9Q5SY16 702 aaKnown RBP9.38□□□□□ -0.91
SMARCE1-206ENST00000447024 C20orf194Q5TEA3 1177 aa9.38□□□□□ -0.91
SMARCE1-206ENST00000447024 NAA16Q6N069 864 aaPredicted RBP9.38□□□□□ -0.91
SMARCE1-206ENST00000447024 BNC2Q6ZN30 1099 aaPredicted RBP9.38□□□□□ -0.91
SMARCE1-206ENST00000447024 ERO1BQ86YB8 467 aa9.38□□□□□ -0.91
SMARCE1-206ENST00000447024 KCNC2Q96PR1 638 aa9.38□□□□□ -0.91
SMARCE1-206ENST00000447024 NOC4LQ9BVI4 516 aaKnown RBP9.38□□□□□ -0.91
SMARCE1-206ENST00000447024 ASPNQ9BXN1 380 aa9.38□□□□□ -0.91
SMARCE1-206ENST00000447024 LRRCC1Q9C099 1032 aa9.38□□□□□ -0.91
SMARCE1-206ENST00000447024 CCDC8Q9H0W5 538 aaPredicted RBP9.38□□□□□ -0.91
SMARCE1-206ENST00000447024 DCTPP1Q9H773 170 aa9.38□□□□□ -0.91
SMARCE1-206ENST00000447024 ZCCHC17Q9NP64 241 aaKnown RBP9.38□□□□□ -0.91
SMARCE1-206ENST00000447024 RNF186Q9NXI6 227 aa9.38□□□□□ -0.91
SMARCE1-206ENST00000447024 KCTD3Q9Y597 815 aa9.38□□□□□ -0.91
SMARCE1-206ENST00000447024 CILPO75339 1184 aa9.37□□□□□ -0.91
SMARCE1-206ENST00000447024 WDHD1O75717 1129 aaPredicted RBP9.37□□□□□ -0.91
SMARCE1-206ENST00000447024 BPNT1O95861 308 aa9.37□□□□□ -0.91
SMARCE1-206ENST00000447024 RGS3P49796 1198 aa9.37□□□□□ -0.91
SMARCE1-206ENST00000447024 GTF2A2P52657 109 aa9.37□□□□□ -0.91
SMARCE1-206ENST00000447024 CACNB3P54284 484 aa9.37□□□□□ -0.91
SMARCE1-206ENST00000447024 ZNF385BQ569K4 471 aa9.37□□□□□ -0.91
SMARCE1-206ENST00000447024 TCERG1LQ5VWI1 586 aa9.37□□□□□ -0.91
SMARCE1-206ENST00000447024 CCDC84Q86UT8 332 aaPredicted RBP9.37□□□□□ -0.91
SMARCE1-206ENST00000447024 ZNF384Q8TF68 577 aa9.37□□□□□ -0.91
SMARCE1-206ENST00000447024 LINC01599Q8WXQ3 324 aa9.37□□□□□ -0.91
SMARCE1-206ENST00000447024 WRNIP1Q96S55 665 aa9.37□□□□□ -0.91
SMARCE1-206ENST00000447024 G6PC3Q9BUM1 346 aa9.37□□□□□ -0.91
SMARCE1-206ENST00000447024 DHX36Q9H2U1 1008 aaKnown RBP9.37□□□□□ -0.91
SMARCE1-206ENST00000447024 CETPP11597 493 aa9.36□□□□□ -0.91
SMARCE1-206ENST00000447024 ATP5JP18859 108 aa9.36□□□□□ -0.91
SMARCE1-206ENST00000447024 PPATQ06203 517 aa9.36□□□□□ -0.91
SMARCE1-206ENST00000447024 TCP10Q12799 353 aa9.36□□□□□ -0.91
SMARCE1-206ENST00000447024 PPIL2Q13356 520 aa9.36□□□□□ -0.91
SMARCE1-206ENST00000447024 VGLL4Q14135 290 aa9.36□□□□□ -0.91
SMARCE1-206ENST00000447024 SSPNQ14714 243 aa9.36□□□□□ -0.91
SMARCE1-206ENST00000447024 OPTNQ96CV9 577 aa9.36□□□□□ -0.91
SMARCE1-206ENST00000447024 GPATCH3Q96I76 525 aa9.36□□□□□ -0.91
SMARCE1-206ENST00000447024 CLMNQ96JQ2 1002 aa9.36□□□□□ -0.91
SMARCE1-206ENST00000447024 IL1RAPL2Q9NP60 686 aa9.36□□□□□ -0.91
SMARCE1-206ENST00000447024 GINM1Q9NU53 330 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms