RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 ARHGAP42A6NI28 874 aa12.56□□□□□ -0.4
FN1-212ENST00000446046 IKBKBO14920 756 aa12.56□□□□□ -0.4
FN1-212ENST00000446046 INPP1P49441 399 aa12.56□□□□□ -0.4
FN1-212ENST00000446046 STYK1Q6J9G0 422 aa12.56□□□□□ -0.4
FN1-212ENST00000446046 ARHGEF1Q92888 912 aaKnown RBP12.56□□□□□ -0.4
FN1-212ENST00000446046 LSG1Q9H089 658 aaKnown RBP12.56□□□□□ -0.4
FN1-212ENST00000446046 GOLGA8SH3BPF8 625 aa12.56□□□□□ -0.4
FN1-212ENST00000446046 MAGEB2O15479 319 aa12.56□□□□□ -0.4
FN1-212ENST00000446046 HOXA13P31271 388 aaPredicted RBP12.56□□□□□ -0.4
FN1-212ENST00000446046 USP11P51784 963 aa12.56□□□□□ -0.4
FN1-212ENST00000446046 RBM41Q96IZ5 413 aaKnown RBP12.56□□□□□ -0.4
FN1-212ENST00000446046 GPBP1L1Q9HC44 474 aaPredicted RBP12.56□□□□□ -0.4
FN1-212ENST00000446046 JPH1Q9HDC5 661 aaPredicted RBP12.56□□□□□ -0.4
FN1-212ENST00000446046 SLC38A7Q9NVC3 462 aa12.56□□□□□ -0.4
FN1-212ENST00000446046 INPP5FQ9Y2H2 1132 aa12.56□□□□□ -0.4
FN1-212ENST00000446046 CSPG5O95196 566 aa12.56□□□□□ -0.4
FN1-212ENST00000446046 ZNF157P51786 506 aaPredicted RBP12.56□□□□□ -0.4
FN1-212ENST00000446046 OSTNP61366 133 aa12.56□□□□□ -0.4
FN1-212ENST00000446046 COG2Q14746 738 aa12.56□□□□□ -0.4
FN1-212ENST00000446046 DUOXA2Q1HG44 320 aa12.56□□□□□ -0.4
FN1-212ENST00000446046 TMTC3Q6ZXV5 915 aa12.56□□□□□ -0.4
FN1-212ENST00000446046 MYLK4Q86YV6 388 aaPredicted RBP12.56□□□□□ -0.4
FN1-212ENST00000446046 TNIP3Q96KP6 325 aa12.56□□□□□ -0.4
FN1-212ENST00000446046 TRIM15Q9C019 465 aa12.56□□□□□ -0.4
FN1-212ENST00000446046 DAAM1Q9Y4D1 1078 aa12.56□□□□□ -0.4
FN1-212ENST00000446046 MYO3AQ8NEV4 1616 aa12.56□□□□□ -0.4
FN1-212ENST00000446046 PGRMC1O00264 195 aaKnown RBP12.56□□□□□ -0.4
FN1-212ENST00000446046 FBXW4P57775 412 aa12.56□□□□□ -0.4
FN1-212ENST00000446046 RHPN2Q8IUC4 686 aa12.56□□□□□ -0.4
FN1-212ENST00000446046 STKLD1Q8NE28 680 aa12.56□□□□□ -0.4
FN1-212ENST00000446046 BUB1O43683 1085 aa12.56□□□□□ -0.4
FN1-212ENST00000446046 PROSER3Q2NL68 480 aa12.56□□□□□ -0.4
FN1-212ENST00000446046 SDE2Q6IQ49 451 aa12.56□□□□□ -0.4
FN1-212ENST00000446046 APOEP02649 317 aa12.56□□□□□ -0.4
FN1-212ENST00000446046 SLFN14P0C7P3 912 aa12.56□□□□□ -0.4
FN1-212ENST00000446046 STAT3P40763 770 aa12.56□□□□□ -0.4
FN1-212ENST00000446046 GTF2A1P52655 376 aaPredicted RBP12.56□□□□□ -0.4
FN1-212ENST00000446046 RASSF7Q02833 373 aa12.56□□□□□ -0.4
FN1-212ENST00000446046 OR6B2Q6IFH4 312 aa12.56□□□□□ -0.4
FN1-212ENST00000446046 TDRD3Q9H7E2 651 aaKnown RBP12.56□□□□□ -0.4
FN1-212ENST00000446046 ECEL1O95672 775 aa12.55□□□□□ -0.4
FN1-212ENST00000446046 CETPP11597 493 aa12.55□□□□□ -0.4
FN1-212ENST00000446046 PDZD8Q8NEN9 1154 aa12.55□□□□□ -0.4
FN1-212ENST00000446046 SCG3Q8WXD2 468 aaKnown RBP12.55□□□□□ -0.4
FN1-212ENST00000446046 TJP2Q9UDY2 1190 aa12.55□□□□□ -0.4
FN1-212ENST00000446046 SLC4A1P02730 911 aa12.55□□□□□ -0.4
FN1-212ENST00000446046 XXYLT1Q8NBI6 393 aa12.55□□□□□ -0.4
FN1-212ENST00000446046 ZNF280CQ8ND82 737 aa12.55□□□□□ -0.4
FN1-212ENST00000446046 LSM7Q9UK45 103 aaKnown RBP12.55□□□□□ -0.4
FN1-212ENST00000446046 SUN1O94901 812 aa12.55□□□□□ -0.4
FN1-212ENST00000446046 SPP2Q13103 211 aa12.55□□□□□ -0.4
FN1-212ENST00000446046 TMEM35BQ8NCS4 154 aa12.55□□□□□ -0.4
FN1-212ENST00000446046 CLIC4Q9Y696 253 aa12.55□□□□□ -0.4
FN1-212ENST00000446046 PODXLO00592 558 aa12.55□□□□□ -0.4
FN1-212ENST00000446046 TXNDC9O14530 226 aa12.55□□□□□ -0.4
FN1-212ENST00000446046 SLC25A27O95847 323 aa12.55□□□□□ -0.4
FN1-212ENST00000446046 KRT7P08729 469 aa12.55□□□□□ -0.4
FN1-212ENST00000446046 WASHC5Q12768 1159 aa12.55□□□□□ -0.4
FN1-212ENST00000446046 SLMAPQ14BN4 828 aa12.55□□□□□ -0.4
FN1-212ENST00000446046 CENPUQ71F23 418 aa12.55□□□□□ -0.4
FN1-212ENST00000446046 RNF180Q86T96 592 aa12.55□□□□□ -0.4
FN1-212ENST00000446046 RPAP3Q9H6T3 665 aaPredicted RBP12.55□□□□□ -0.4
FN1-212ENST00000446046 MYH2Q9UKX2 1941 aa12.55□□□□□ -0.4
FN1-212ENST00000446046 IQANK1A0A1B0GTG1 560 aa12.55□□□□□ -0.4
FN1-212ENST00000446046 GSTA4O15217 222 aa12.55□□□□□ -0.4
FN1-212ENST00000446046 FAM182BQ5T319 152 aa12.55□□□□□ -0.4
FN1-212ENST00000446046 PDIK1LQ8N165 341 aa12.55□□□□□ -0.4
FN1-212ENST00000446046 TAF1CQ15572 869 aaPredicted RBP12.55□□□□□ -0.4
FN1-212ENST00000446046 PRDM10Q9NQV6 1147 aa12.55□□□□□ -0.4
FN1-212ENST00000446046 FANCLQ9NW38 375 aa12.55□□□□□ -0.4
FN1-212ENST00000446046 THEGQ9P2T0 379 aa12.55□□□□□ -0.4
FN1-212ENST00000446046 CNOT7Q9UIV1 285 aaKnown RBP12.55□□□□□ -0.4
FN1-212ENST00000446046 LZICQ8WZA0 190 aa12.54□□□□□ -0.4
FN1-212ENST00000446046 EFCAB8A8MWE9 144 aa12.54□□□□□ -0.4
FN1-212ENST00000446046 GPATCH11Q8N954 259 aa12.54□□□□□ -0.4
FN1-212ENST00000446046 ZBTB18Q99592 522 aa12.54□□□□□ -0.4
FN1-212ENST00000446046 SMARCAD1Q9H4L7 1026 aa12.54□□□□□ -0.4
FN1-212ENST00000446046 FNDC3AQ9Y2H6 1198 aaKnown RBP12.54□□□□□ -0.4
FN1-212ENST00000446046 UBN2Q6ZU65 1347 aa12.54□□□□□ -0.4
FN1-212ENST00000446046 GNGT2O14610 69 aa12.54□□□□□ -0.4
FN1-212ENST00000446046 EN1Q05925 392 aaPredicted RBP12.54□□□□□ -0.4
FN1-212ENST00000446046 SNX17Q15036 470 aa12.54□□□□□ -0.4
FN1-212ENST00000446046 NAALADL2Q58DX5 795 aa12.54□□□□□ -0.4
FN1-212ENST00000446046 ATG16L1Q676U5 607 aa12.54□□□□□ -0.4
FN1-212ENST00000446046 PCIF1Q9H4Z3 704 aa12.54□□□□□ -0.4
FN1-212ENST00000446046 CLIC2O15247 247 aa12.54□□□□□ -0.4
FN1-212ENST00000446046 SNX2O60749 519 aa12.54□□□□□ -0.4
FN1-212ENST00000446046 CD58P19256 250 aa12.54□□□□□ -0.4
FN1-212ENST00000446046 UNC13DQ70J99 1090 aa12.54□□□□□ -0.4
FN1-212ENST00000446046 SERPINI1Q99574 410 aa12.54□□□□□ -0.4
FN1-212ENST00000446046 TEX13BQ9BXU2 312 aa12.54□□□□□ -0.4
FN1-212ENST00000446046 SUCLA2Q9P2R7 463 aaPredicted RBP12.54□□□□□ -0.4
FN1-212ENST00000446046 GDAQ9Y2T3 454 aa12.54□□□□□ -0.4
FN1-212ENST00000446046 PSMC5P62195 406 aa12.54□□□□□ -0.4
FN1-212ENST00000446046 ZNF579Q8NAF0 562 aaKnown RBP12.54□□□□□ -0.4
FN1-212ENST00000446046 MRFAP1L1Q96HT8 127 aa12.54□□□□□ -0.4
FN1-212ENST00000446046 MEIS1O00470 390 aa12.54□□□□□ -0.4
FN1-212ENST00000446046 TADA2AO75478 443 aa12.54□□□□□ -0.4
FN1-212ENST00000446046 GUCY2FP51841 1108 aa12.54□□□□□ -0.4
FN1-212ENST00000446046 CAV1Q03135 178 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms