RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 CLSTN2Q9H4D0 955 aa19.34■□□□□ 0.69
SGCE-206ENST00000445866 DHX33Q9H6R0 707 aaKnown RBP19.34■□□□□ 0.69
SGCE-206ENST00000445866 PDLIM7Q9NR12 457 aa19.34■□□□□ 0.69
SGCE-206ENST00000445866 KCND2Q9NZV8 630 aa19.34■□□□□ 0.69
SGCE-206ENST00000445866 A0A0U1RQG5 324 aaPredicted RBP19.33■□□□□ 0.69
SGCE-206ENST00000445866 EN2P19622 333 aaPredicted RBP19.33■□□□□ 0.69
SGCE-206ENST00000445866 CUL4BQ13620 913 aa19.33■□□□□ 0.69
SGCE-206ENST00000445866 POSTNQ15063 836 aa19.33■□□□□ 0.69
SGCE-206ENST00000445866 FAM102BQ5T8I3 360 aa19.33■□□□□ 0.69
SGCE-206ENST00000445866 EFCAB12Q6NXP0 572 aa19.33■□□□□ 0.69
SGCE-206ENST00000445866 MTHFD1LQ6UB35 978 aa19.33■□□□□ 0.69
SGCE-206ENST00000445866 ELOA2Q8IYF1 753 aaPredicted RBP19.33■□□□□ 0.69
SGCE-206ENST00000445866 RETREG2Q8NC44 543 aa19.33■□□□□ 0.69
SGCE-206ENST00000445866 JPH2Q9BR39 696 aaPredicted RBP19.33■□□□□ 0.69
SGCE-206ENST00000445866 NUP62CLQ9H1M0 184 aa19.33■□□□□ 0.69
SGCE-206ENST00000445866 ATP6V0A4Q9HBG4 840 aa19.33■□□□□ 0.69
SGCE-206ENST00000445866 COL1A2P08123 1366 aa19.33■□□□□ 0.69
SGCE-206ENST00000445866 ARVCFO00192 962 aa19.33■□□□□ 0.68
SGCE-206ENST00000445866 GTPBP6O43824 516 aaPredicted RBP19.33■□□□□ 0.68
SGCE-206ENST00000445866 GUCY2CP25092 1073 aa19.33■□□□□ 0.68
SGCE-206ENST00000445866 DNM2P50570 870 aa19.33■□□□□ 0.68
SGCE-206ENST00000445866 PNOCQ13519 176 aa19.33■□□□□ 0.68
SGCE-206ENST00000445866 HIC1Q14526 733 aa19.33■□□□□ 0.68
SGCE-206ENST00000445866 CAVIN1Q6NZI2 390 aaKnown RBP19.33■□□□□ 0.68
SGCE-206ENST00000445866 MCPH1Q8NEM0 835 aa19.33■□□□□ 0.68
SGCE-206ENST00000445866 DIS3LQ8TF46 1054 aaKnown RBP19.33■□□□□ 0.68
SGCE-206ENST00000445866 PAWRQ96IZ0 340 aaKnown RBP19.33■□□□□ 0.68
SGCE-206ENST00000445866 TRIM9Q9C026 710 aa19.33■□□□□ 0.68
SGCE-206ENST00000445866 GTF2IRD1Q9UHL9 959 aa19.33■□□□□ 0.68
SGCE-206ENST00000445866 KIAA1217Q5T5P2 1943 aa19.32■□□□□ 0.68
SGCE-206ENST00000445866 SFI1A8K8P3 1242 aa19.32■□□□□ 0.68
SGCE-206ENST00000445866 TREHO43280 583 aa19.32■□□□□ 0.68
SGCE-206ENST00000445866 C22orf31O95567 290 aa19.32■□□□□ 0.68
SGCE-206ENST00000445866 MYL1P05976 194 aa19.32■□□□□ 0.68
SGCE-206ENST00000445866 IDEP14735 1019 aa19.32■□□□□ 0.68
SGCE-206ENST00000445866 TMOD1P28289 359 aa19.32■□□□□ 0.68
SGCE-206ENST00000445866 ATN1P54259 1190 aaPredicted RBP19.32■□□□□ 0.68
SGCE-206ENST00000445866 SOX10P56693 466 aa19.32■□□□□ 0.68
SGCE-206ENST00000445866 ASIC1P78348 528 aa19.32■□□□□ 0.68
SGCE-206ENST00000445866 CACNB1Q02641 598 aaPredicted RBP19.32■□□□□ 0.68
SGCE-206ENST00000445866 GIT2Q14161 759 aa19.32■□□□□ 0.68
SGCE-206ENST00000445866 EMC2Q15006 297 aa19.32■□□□□ 0.68
SGCE-206ENST00000445866 GDF6Q6KF10 455 aaPredicted RBP19.32■□□□□ 0.68
SGCE-206ENST00000445866 SESTD1Q86VW0 696 aa19.32■□□□□ 0.68
SGCE-206ENST00000445866 LRRC71Q8N4P6 559 aa19.32■□□□□ 0.68
SGCE-206ENST00000445866 SLC43A3Q8NBI5 491 aa19.32■□□□□ 0.68
SGCE-206ENST00000445866 ERCC4Q92889 916 aaPredicted RBP19.32■□□□□ 0.68
SGCE-206ENST00000445866 TMEM143Q96AN5 459 aa19.32■□□□□ 0.68
SGCE-206ENST00000445866 ZHX3Q9H4I2 956 aa19.32■□□□□ 0.68
SGCE-206ENST00000445866 TUBE1Q9UJT0 475 aa19.32■□□□□ 0.68
SGCE-206ENST00000445866 PRR29P0C7W0 189 aa19.31■□□□□ 0.68
SGCE-206ENST00000445866 ADAM17P78536 824 aa19.31■□□□□ 0.68
SGCE-206ENST00000445866 PTPN11Q06124 597 aaPredicted RBP19.31■□□□□ 0.68
SGCE-206ENST00000445866 SYAP1Q96A49 352 aaPredicted RBP19.31■□□□□ 0.68
SGCE-206ENST00000445866 DNAJC19Q96DA6 116 aa19.31■□□□□ 0.68
SGCE-206ENST00000445866 REEP2Q9BRK0 252 aa19.31■□□□□ 0.68
SGCE-206ENST00000445866 TIPINQ9BVW5 301 aa19.31■□□□□ 0.68
SGCE-206ENST00000445866 SEZ6LQ9BYH1 1024 aa19.31■□□□□ 0.68
SGCE-206ENST00000445866 GPRC5CQ9NQ84 441 aa19.31■□□□□ 0.68
SGCE-206ENST00000445866 IGKV6-21A0A0C4DH24 114 aa19.3■□□□□ 0.68
SGCE-206ENST00000445866 MBLAC1A4D2B0 266 aaPredicted RBP19.3■□□□□ 0.68
SGCE-206ENST00000445866 HIP1RO75146 1068 aa19.3■□□□□ 0.68
SGCE-206ENST00000445866 SMC2O95347 1197 aa19.3■□□□□ 0.68
SGCE-206ENST00000445866 CDK7P50613 346 aa19.3■□□□□ 0.68
SGCE-206ENST00000445866 DPYDQ12882 1025 aa19.3■□□□□ 0.68
SGCE-206ENST00000445866 PTGISQ16647 500 aa19.3■□□□□ 0.68
SGCE-206ENST00000445866 CCDC183Q5T5S1 534 aa19.3■□□□□ 0.68
SGCE-206ENST00000445866 SLC39A5Q6ZMH5 540 aa19.3■□□□□ 0.68
SGCE-206ENST00000445866 NECAB2Q7Z6G3 386 aa19.3■□□□□ 0.68
SGCE-206ENST00000445866 ABHD8Q96I13 439 aa19.3■□□□□ 0.68
SGCE-206ENST00000445866 C11orf49Q9H6J7 331 aa19.3■□□□□ 0.68
SGCE-206ENST00000445866 XPNPEP1Q9NQW7 623 aa19.3■□□□□ 0.68
SGCE-206ENST00000445866 SUCLA2Q9P2R7 463 aaPredicted RBP19.3■□□□□ 0.68
SGCE-206ENST00000445866 NOD1Q9Y239 953 aa19.3■□□□□ 0.68
SGCE-206ENST00000445866 PCDHA2Q9Y5H9 948 aa19.3■□□□□ 0.68
SGCE-206ENST00000445866 BRCA2P51587 3418 aa19.3■□□□□ 0.68
SGCE-206ENST00000445866 GAS2O43903 313 aaKnown RBP19.3■□□□□ 0.68
SGCE-206ENST00000445866 CYP2C9P11712 490 aa19.3■□□□□ 0.68
SGCE-206ENST00000445866 COL6A1P12109 1028 aa19.3■□□□□ 0.68
SGCE-206ENST00000445866 HOXC8P31273 242 aa19.3■□□□□ 0.68
SGCE-206ENST00000445866 CLCN3P51790 818 aa19.3■□□□□ 0.68
SGCE-206ENST00000445866 MKRN4PQ13434 485 aaPredicted RBP19.3■□□□□ 0.68
SGCE-206ENST00000445866 IER5Q5VY09 327 aa19.3■□□□□ 0.68
SGCE-206ENST00000445866 CNNM4Q6P4Q7 775 aa19.3■□□□□ 0.68
SGCE-206ENST00000445866 TCP11Q8WWU5 503 aa19.3■□□□□ 0.68
SGCE-206ENST00000445866 TRPV6Q9H1D0 765 aa19.3■□□□□ 0.68
SGCE-206ENST00000445866 PANK4Q9NVE7 773 aa19.3■□□□□ 0.68
SGCE-206ENST00000445866 TMEM63CQ9P1W3 806 aa19.3■□□□□ 0.68
SGCE-206ENST00000445866 PCDHA5Q9Y5H7 936 aa19.3■□□□□ 0.68
SGCE-206ENST00000445866 COL4A3BPQ9Y5P4 624 aa19.3■□□□□ 0.68
SGCE-206ENST00000445866 RSPH10B2B2RC85 870 aa19.29■□□□□ 0.68
SGCE-206ENST00000445866 TBCAO75347 108 aaKnown RBP19.29■□□□□ 0.68
SGCE-206ENST00000445866 FAM13AO94988 1023 aa19.29■□□□□ 0.68
SGCE-206ENST00000445866 RSPH10BP0C881 870 aa19.29■□□□□ 0.68
SGCE-206ENST00000445866 DRP2Q13474 957 aa19.29■□□□□ 0.68
SGCE-206ENST00000445866 HERC4Q5GLZ8 1057 aaPredicted RBP19.29■□□□□ 0.68
SGCE-206ENST00000445866 CCDC65Q8IXS2 484 aa19.29■□□□□ 0.68
SGCE-206ENST00000445866 KIAA0319LQ8IZA0 1049 aa19.29■□□□□ 0.68
SGCE-206ENST00000445866 MYCT1Q8N699 235 aa19.29■□□□□ 0.68
SGCE-206ENST00000445866 PRPF31Q8WWY3 499 aaKnown RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms