RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 KAT2BQ92831 832 aa19.22■□□□□ 0.67
LIME1-202ENST00000444951 SH2D3AQ9BRG2 576 aa19.22■□□□□ 0.67
LIME1-202ENST00000444951 CCSER1Q9C0I3 900 aa19.22■□□□□ 0.67
LIME1-202ENST00000444951 RNPEPQ9H4A4 650 aa19.22■□□□□ 0.67
LIME1-202ENST00000444951 GOLPH3LQ9H4A5 285 aa19.22■□□□□ 0.67
LIME1-202ENST00000444951 PRDM12Q9H4Q4 367 aa19.22■□□□□ 0.67
LIME1-202ENST00000444951 SEPT9Q9UHD8 586 aaPredicted RBP19.22■□□□□ 0.67
LIME1-202ENST00000444951 REV3LO60673 3130 aa19.21■□□□□ 0.67
LIME1-202ENST00000444951 A0A087X0B3 334 aa19.21■□□□□ 0.67
LIME1-202ENST00000444951 E9PMD0 336 aa19.21■□□□□ 0.67
LIME1-202ENST00000444951 DKC1O60832 514 aaKnown RBP eCLIP19.21■□□□□ 0.67
LIME1-202ENST00000444951 F2P00734 622 aa19.21■□□□□ 0.67
LIME1-202ENST00000444951 OATP04181 439 aa19.21■□□□□ 0.67
LIME1-202ENST00000444951 DHX8Q14562 1220 aaKnown RBP19.21■□□□□ 0.67
LIME1-202ENST00000444951 RRAGBQ5VZM2 374 aa19.21■□□□□ 0.67
LIME1-202ENST00000444951 PLA2G4FQ68DD2 849 aa19.21■□□□□ 0.67
LIME1-202ENST00000444951 CCDC43Q96MW1 224 aaKnown RBP19.21■□□□□ 0.67
LIME1-202ENST00000444951 SEZ6LQ9BYH1 1024 aa19.21■□□□□ 0.67
LIME1-202ENST00000444951 NKX2-4Q9H2Z4 354 aa19.21■□□□□ 0.67
LIME1-202ENST00000444951 PRDM6Q9NQX0 595 aa19.21■□□□□ 0.67
LIME1-202ENST00000444951 KCNH3Q9ULD8 1083 aa19.21■□□□□ 0.67
LIME1-202ENST00000444951 TTC28Q96AY4 2481 aa19.2■□□□□ 0.66
LIME1-202ENST00000444951 POLR2DO15514 142 aaKnown RBP19.2■□□□□ 0.66
LIME1-202ENST00000444951 SSBP05455 408 aaKnown RBP eCLIP19.2■□□□□ 0.66
LIME1-202ENST00000444951 YWHABP31946 246 aaKnown RBP19.2■□□□□ 0.66
LIME1-202ENST00000444951 MCM4P33991 863 aa19.2■□□□□ 0.66
LIME1-202ENST00000444951 STAT6P42226 847 aa19.2■□□□□ 0.66
LIME1-202ENST00000444951 NDUFA8P51970 172 aa19.2■□□□□ 0.66
LIME1-202ENST00000444951 RABGGTBP53611 331 aa19.2■□□□□ 0.66
LIME1-202ENST00000444951 UBE2HP62256 183 aa19.2■□□□□ 0.66
LIME1-202ENST00000444951 IGBP1P78318 339 aa19.2■□□□□ 0.66
LIME1-202ENST00000444951 ADGRE1Q14246 886 aa19.2■□□□□ 0.66
LIME1-202ENST00000444951 TMEM119Q4V9L6 283 aa19.2■□□□□ 0.66
LIME1-202ENST00000444951 FAM47CQ5HY64 1035 aa19.2■□□□□ 0.66
LIME1-202ENST00000444951 CCDC73Q6ZRK6 1079 aa19.2■□□□□ 0.66
LIME1-202ENST00000444951 KCNK18Q7Z418 384 aa19.2■□□□□ 0.66
LIME1-202ENST00000444951 C4orf19Q8IY42 314 aa19.2■□□□□ 0.66
LIME1-202ENST00000444951 TET1Q8NFU7 2136 aa19.2■□□□□ 0.66
LIME1-202ENST00000444951 DHX58Q96C10 678 aa19.2■□□□□ 0.66
LIME1-202ENST00000444951 NACC1Q96RE7 527 aa19.2■□□□□ 0.66
LIME1-202ENST00000444951 KATNAL1Q9BW62 490 aa19.2■□□□□ 0.66
LIME1-202ENST00000444951 NT5C3AQ9H0P0 336 aa19.2■□□□□ 0.66
LIME1-202ENST00000444951 NRBP2Q9NSY0 501 aa19.2■□□□□ 0.66
LIME1-202ENST00000444951 LMBRD1Q9NUN5 540 aa19.2■□□□□ 0.66
LIME1-202ENST00000444951 MUC3AQ02505 3323 aa19.2■□□□□ 0.66
LIME1-202ENST00000444951 WDR81Q562E7 1941 aa19.19■□□□□ 0.66
LIME1-202ENST00000444951 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.19■□□□□ 0.66
LIME1-202ENST00000444951 MYOGP15173 224 aa19.19■□□□□ 0.66
LIME1-202ENST00000444951 SLC26A2P50443 739 aa19.19■□□□□ 0.66
LIME1-202ENST00000444951 MTERF2Q49AM1 385 aa19.19■□□□□ 0.66
LIME1-202ENST00000444951 XKR9Q5GH70 373 aa19.19■□□□□ 0.66
LIME1-202ENST00000444951 XKR3Q5GH77 459 aa19.19■□□□□ 0.66
LIME1-202ENST00000444951 ATP8B4Q8TF62 1192 aa19.19■□□□□ 0.66
LIME1-202ENST00000444951 TRAPPC12Q8WVT3 735 aa19.19■□□□□ 0.66
LIME1-202ENST00000444951 FAM167AQ96KS9 214 aa19.19■□□□□ 0.66
LIME1-202ENST00000444951 DNM3Q9UQ16 869 aa19.19■□□□□ 0.66
LIME1-202ENST00000444951 TANC1Q9C0D5 1861 aa19.19■□□□□ 0.66
LIME1-202ENST00000444951 MYH9P35579 1960 aaKnown RBP19.19■□□□□ 0.66
LIME1-202ENST00000444951 STBD1O95210 358 aa19.18■□□□□ 0.66
LIME1-202ENST00000444951 SMIM10L2AP0DMW4 78 aa19.18■□□□□ 0.66
LIME1-202ENST00000444951 SMIM10L2BP0DMW5 78 aa19.18■□□□□ 0.66
LIME1-202ENST00000444951 LIG1P18858 919 aa19.18■□□□□ 0.66
LIME1-202ENST00000444951 SYKP43405 635 aa19.18■□□□□ 0.66
LIME1-202ENST00000444951 NPEPPSP55786 919 aa19.18■□□□□ 0.66
LIME1-202ENST00000444951 HYIQ5T013 277 aa19.18■□□□□ 0.66
LIME1-202ENST00000444951 ANO5Q75V66 913 aa19.18■□□□□ 0.66
LIME1-202ENST00000444951 OTUD6AQ7L8S5 288 aa19.18■□□□□ 0.66
LIME1-202ENST00000444951 DEFB128Q7Z7B8 93 aa19.18■□□□□ 0.66
LIME1-202ENST00000444951 C7orf31Q8N865 590 aa19.18■□□□□ 0.66
LIME1-202ENST00000444951 LRRC15Q8TF66 581 aa19.18■□□□□ 0.66
LIME1-202ENST00000444951 BBXQ8WY36 941 aaPredicted RBP19.18■□□□□ 0.66
LIME1-202ENST00000444951 BMP2KQ9NSY1 1161 aaPredicted RBP19.18■□□□□ 0.66
LIME1-202ENST00000444951 TRIP12Q14669 1992 aaPredicted RBP19.17■□□□□ 0.66
LIME1-202ENST00000444951 ARHGEF35A5YM69 484 aa19.17■□□□□ 0.66
LIME1-202ENST00000444951 HAS3O00219 553 aa19.17■□□□□ 0.66
LIME1-202ENST00000444951 SLC26A4O43511 780 aa19.17■□□□□ 0.66
LIME1-202ENST00000444951 LYPLA2O95372 231 aa19.17■□□□□ 0.66
LIME1-202ENST00000444951 INSRRP14616 1297 aa19.17■□□□□ 0.66
LIME1-202ENST00000444951 MUTP22033 750 aa19.17■□□□□ 0.66
LIME1-202ENST00000444951 PPFIA1Q13136 1202 aa19.17■□□□□ 0.66
LIME1-202ENST00000444951 MCM6Q14566 821 aa19.17■□□□□ 0.66
LIME1-202ENST00000444951 RAB30Q15771 203 aa19.17■□□□□ 0.66
LIME1-202ENST00000444951 CEP170P1Q96L14 293 aa19.17■□□□□ 0.66
LIME1-202ENST00000444951 CTAGE1Q96RT6 745 aa19.17■□□□□ 0.66
LIME1-202ENST00000444951 BHMT2Q9H2M3 363 aa19.17■□□□□ 0.66
LIME1-202ENST00000444951 SETD4Q9NVD3 440 aa19.17■□□□□ 0.66
LIME1-202ENST00000444951 HDAC6Q9UBN7 1215 aa19.17■□□□□ 0.66
LIME1-202ENST00000444951 SERTAD1Q9UHV2 236 aa19.17■□□□□ 0.66
LIME1-202ENST00000444951 MSRAQ9UJ68 235 aa19.17■□□□□ 0.66
LIME1-202ENST00000444951 HPSEQ9Y251 543 aa19.17■□□□□ 0.66
LIME1-202ENST00000444951 ZBBXA8MT70 800 aa19.16■□□□□ 0.66
LIME1-202ENST00000444951 HBP1O60381 514 aa19.16■□□□□ 0.66
LIME1-202ENST00000444951 EYA4O95677 639 aa19.16■□□□□ 0.66
LIME1-202ENST00000444951 PLA2G4BP0C869 781 aa19.16■□□□□ 0.66
LIME1-202ENST00000444951 GRIK4Q16099 956 aa19.16■□□□□ 0.66
LIME1-202ENST00000444951 NFRKBQ6P4R8 1299 aa19.16■□□□□ 0.66
LIME1-202ENST00000444951 IQUBQ8NA54 791 aa19.16■□□□□ 0.66
LIME1-202ENST00000444951 PPM1EQ8WY54 764 aa19.16■□□□□ 0.66
LIME1-202ENST00000444951 RAD54LQ92698 747 aa19.16■□□□□ 0.66
LIME1-202ENST00000444951 STAMQ92783 540 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms