RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-208ENST00000444677 KDM3AQ9Y4C1 1321 aa15.17■□□□□ 0.02
GARNL3-208ENST00000444677 CDH23Q9H251 3354 aa15.17■□□□□ 0.02
GARNL3-208ENST00000444677 IGKV6-21A0A0C4DH24 114 aa15.17■□□□□ 0.02
GARNL3-208ENST00000444677 H3BQV1 296 aa15.17■□□□□ 0.02
GARNL3-208ENST00000444677 M0QZ92 97 aa15.17■□□□□ 0.02
GARNL3-208ENST00000444677 TLL1O43897 1013 aa15.17■□□□□ 0.02
GARNL3-208ENST00000444677 UPP2O95045 317 aa15.17■□□□□ 0.02
GARNL3-208ENST00000444677 TECP42680 631 aa15.17■□□□□ 0.02
GARNL3-208ENST00000444677 NLRP11P59045 1033 aaKnown RBP15.17■□□□□ 0.02
GARNL3-208ENST00000444677 TBC1D8BQ0IIM8 1120 aa15.17■□□□□ 0.02
GARNL3-208ENST00000444677 C4orf19Q8IY42 314 aa15.17■□□□□ 0.02
GARNL3-208ENST00000444677 ZBED2Q9BTP6 218 aa15.17■□□□□ 0.02
GARNL3-208ENST00000444677 ADAMTS10Q9H324 1103 aa15.17■□□□□ 0.02
GARNL3-208ENST00000444677 TMX1Q9H3N1 280 aa15.17■□□□□ 0.02
GARNL3-208ENST00000444677 PRDM12Q9H4Q4 367 aa15.17■□□□□ 0.02
GARNL3-208ENST00000444677 SLC28A3Q9HAS3 691 aa15.17■□□□□ 0.02
GARNL3-208ENST00000444677 BMP2KQ9NSY1 1161 aaPredicted RBP15.17■□□□□ 0.02
GARNL3-208ENST00000444677 NOL7Q9UMY1 257 aaKnown RBP15.17■□□□□ 0.02
GARNL3-208ENST00000444677 KIF3AQ9Y496 699 aa15.17■□□□□ 0.02
GARNL3-208ENST00000444677 TET1Q8NFU7 2136 aa15.17■□□□□ 0.02
GARNL3-208ENST00000444677 EYSQ5T1H1 3165 aa15.16■□□□□ 0.02
GARNL3-208ENST00000444677 TMEM265A0A087WTH1 108 aa15.16■□□□□ 0.02
GARNL3-208ENST00000444677 RFXAPO00287 272 aa15.16■□□□□ 0.02
GARNL3-208ENST00000444677 EFCAB14O75071 495 aa15.16■□□□□ 0.02
GARNL3-208ENST00000444677 MAFO75444 373 aaPredicted RBP15.16■□□□□ 0.02
GARNL3-208ENST00000444677 GJB5O95377 273 aa15.16■□□□□ 0.02
GARNL3-208ENST00000444677 AMHP03971 560 aa15.16■□□□□ 0.02
GARNL3-208ENST00000444677 OR52Z1P0C646 297 aa15.16■□□□□ 0.02
GARNL3-208ENST00000444677 PPP2R2DQ66LE6 453 aa15.16■□□□□ 0.02
GARNL3-208ENST00000444677 APBB2Q92870 758 aa15.16■□□□□ 0.02
GARNL3-208ENST00000444677 CEP170P1Q96L14 293 aa15.16■□□□□ 0.02
GARNL3-208ENST00000444677 ZSWIM4Q9H7M6 989 aa15.16■□□□□ 0.02
GARNL3-208ENST00000444677 ERVK-5Q9HDB9 667 aa15.16■□□□□ 0.02
GARNL3-208ENST00000444677 CYP26B1Q9NR63 512 aa15.16■□□□□ 0.02
GARNL3-208ENST00000444677 EPOPA6NHQ4 379 aa15.15■□□□□ 0.02
GARNL3-208ENST00000444677 MGEA5O60502 916 aa15.15■□□□□ 0.02
GARNL3-208ENST00000444677 MED24O75448 989 aa15.15■□□□□ 0.02
GARNL3-208ENST00000444677 CSDE1O75534 798 aaKnown RBP15.15■□□□□ 0.02
GARNL3-208ENST00000444677 RPS6KA5O75582 802 aa15.15■□□□□ 0.02
GARNL3-208ENST00000444677 RPLP2P05387 115 aaKnown RBP15.15■□□□□ 0.02
GARNL3-208ENST00000444677 SPATA31C1P0DKV0 1188 aa15.15■□□□□ 0.02
GARNL3-208ENST00000444677 FGFR4P22455 802 aa15.15■□□□□ 0.02
GARNL3-208ENST00000444677 YWHABP31946 246 aaKnown RBP15.15■□□□□ 0.02
GARNL3-208ENST00000444677 TRAPPC10P48553 1259 aa15.15■□□□□ 0.02
GARNL3-208ENST00000444677 GPC3P51654 580 aa15.15■□□□□ 0.02
GARNL3-208ENST00000444677 CRYBB1P53674 252 aaPredicted RBP15.15■□□□□ 0.02
GARNL3-208ENST00000444677 TAP1Q03518 808 aa15.15■□□□□ 0.02
GARNL3-208ENST00000444677 NFX1Q12986 1120 aaKnown RBP15.15■□□□□ 0.02
GARNL3-208ENST00000444677 PAK2Q13177 524 aa15.15■□□□□ 0.02
GARNL3-208ENST00000444677 IL17AQ16552 155 aa15.15■□□□□ 0.02
GARNL3-208ENST00000444677 FAM228AQ86W67 206 aa15.15■□□□□ 0.02
GARNL3-208ENST00000444677 KSR1Q8IVT5 923 aa15.15■□□□□ 0.02
GARNL3-208ENST00000444677 PIGOQ8TEQ8 1089 aa15.15■□□□□ 0.02
GARNL3-208ENST00000444677 TOP1MTQ969P6 601 aa15.15■□□□□ 0.02
GARNL3-208ENST00000444677 MAP7D2Q96T17 732 aa15.15■□□□□ 0.02
GARNL3-208ENST00000444677 RAD9AQ99638 391 aa15.15■□□□□ 0.02
GARNL3-208ENST00000444677 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.15■□□□□ 0.02
GARNL3-208ENST00000444677 ST3GAL5Q9UNP4 418 aa15.15■□□□□ 0.02
GARNL3-208ENST00000444677 SQORQ9Y6N5 450 aa15.15■□□□□ 0.02
GARNL3-208ENST00000444677 K7ELQ4 463 aaPredicted RBP15.14■□□□□ 0.01
GARNL3-208ENST00000444677 DKC1O60832 514 aaKnown RBP eCLIP15.14■□□□□ 0.018e-6■□□□□ 10.8
GARNL3-208ENST00000444677 IBSPP21815 317 aaPredicted RBP15.14■□□□□ 0.01
GARNL3-208ENST00000444677 TMOD1P28289 359 aa15.14■□□□□ 0.01
GARNL3-208ENST00000444677 PTGDRQ13258 359 aa15.14■□□□□ 0.01
GARNL3-208ENST00000444677 ORC2Q13416 577 aaPredicted RBP15.14■□□□□ 0.01
GARNL3-208ENST00000444677 ADGRE1Q14246 886 aa15.14■□□□□ 0.01
GARNL3-208ENST00000444677 XKR9Q5GH70 373 aa15.14■□□□□ 0.01
GARNL3-208ENST00000444677 CATSPER3Q86XQ3 398 aa15.14■□□□□ 0.01
GARNL3-208ENST00000444677 TMEM143Q96AN5 459 aa15.14■□□□□ 0.01
GARNL3-208ENST00000444677 SUCLA2Q9P2R7 463 aaPredicted RBP15.14■□□□□ 0.01
GARNL3-208ENST00000444677 LYPLA2O95372 231 aa15.13■□□□□ 0.01
GARNL3-208ENST00000444677 FOSL2P15408 326 aa15.13■□□□□ 0.01
GARNL3-208ENST00000444677 HTRA4P83105 476 aaPredicted RBP15.13■□□□□ 0.01
GARNL3-208ENST00000444677 ECM1Q16610 540 aa15.13■□□□□ 0.01
GARNL3-208ENST00000444677 FERMT3Q86UX7 667 aa15.13■□□□□ 0.01
GARNL3-208ENST00000444677 USP38Q8NB14 1042 aa15.13■□□□□ 0.01
GARNL3-208ENST00000444677 DHX33Q9H6R0 707 aaKnown RBP15.13■□□□□ 0.01
GARNL3-208ENST00000444677 XPNPEP1Q9NQW7 623 aa15.13■□□□□ 0.01
GARNL3-208ENST00000444677 A0A087WZ62 844 aa15.12■□□□□ 0.01
GARNL3-208ENST00000444677 LINC01553A4QN01 128 aa15.12■□□□□ 0.01
GARNL3-208ENST00000444677 VPS37CA5D8V6 355 aaPredicted RBP15.12■□□□□ 0.01
GARNL3-208ENST00000444677 PP2D1A8MPX8 630 aa15.12■□□□□ 0.01
GARNL3-208ENST00000444677 OTUD6AQ7L8S5 288 aa15.12■□□□□ 0.01
GARNL3-208ENST00000444677 RHPN2Q8IUC4 686 aa15.12■□□□□ 0.01
GARNL3-208ENST00000444677 MAFAQ8NHW3 353 aaPredicted RBP15.12■□□□□ 0.01
GARNL3-208ENST00000444677 NLRP7Q8WX94 980 aa15.12■□□□□ 0.01
GARNL3-208ENST00000444677 ARNTL2Q8WYA1 636 aa15.12■□□□□ 0.01
GARNL3-208ENST00000444677 SNX21Q969T3 373 aa15.12■□□□□ 0.01
GARNL3-208ENST00000444677 FDXACB1Q9BRP7 624 aaPredicted RBP15.12■□□□□ 0.01
GARNL3-208ENST00000444677 KAT6AQ92794 2004 aa15.12■□□□□ 0.01
GARNL3-208ENST00000444677 COL4A4P53420 1690 aaPredicted RBP15.12■□□□□ 0.01
GARNL3-208ENST00000444677 GPR182O15218 404 aa15.11■□□□□ 0.01
GARNL3-208ENST00000444677 DARSP14868 501 aaKnown RBP15.11■□□□□ 0.01
GARNL3-208ENST00000444677 SYT1P21579 422 aa15.11■□□□□ 0.01
GARNL3-208ENST00000444677 EIF4BP23588 611 aaKnown RBP15.11■□□□□ 0.01
GARNL3-208ENST00000444677 CDC25AP30304 524 aa15.11■□□□□ 0.01
GARNL3-208ENST00000444677 GATMP50440 423 aa15.11■□□□□ 0.01
GARNL3-208ENST00000444677 DNM2P50570 870 aa15.11■□□□□ 0.01
GARNL3-208ENST00000444677 FXR2P51116 673 aaKnown RBP eCLIP15.11■□□□□ 0.01
GARNL3-208ENST00000444677 POLGP54098 1239 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms