RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 NEK8Q86SG6 692 aa12.26□□□□□ -0.45
SF3A1-203ENST00000444440 TMEM192Q8IY95 271 aa12.26□□□□□ -0.45
SF3A1-203ENST00000444440 NME8Q8N427 588 aa12.26□□□□□ -0.45
SF3A1-203ENST00000444440 METTL13Q8N6R0 699 aa12.26□□□□□ -0.45
SF3A1-203ENST00000444440 ASB2Q96Q27 587 aa12.26□□□□□ -0.45
SF3A1-203ENST00000444440 TSPYL2Q9H2G4 693 aaPredicted RBP12.26□□□□□ -0.45
SF3A1-203ENST00000444440 HCSTQ9UBK5 93 aa12.26□□□□□ -0.45
SF3A1-203ENST00000444440 TCEAL9Q9UHQ7 104 aa12.26□□□□□ -0.45
SF3A1-203ENST00000444440 TDRD15B5MCY1 1934 aaKnown RBP12.26□□□□□ -0.45
SF3A1-203ENST00000444440 TTC28Q96AY4 2481 aa12.26□□□□□ -0.45
SF3A1-203ENST00000444440 CCDC194A0A1B0GVG4 234 aa12.25□□□□□ -0.45
SF3A1-203ENST00000444440 BTBD18B2RXH4 712 aa12.25□□□□□ -0.45
SF3A1-203ENST00000444440 H3BNC9 293 aa12.25□□□□□ -0.45
SF3A1-203ENST00000444440 CCNT1O60563 726 aaKnown RBP12.25□□□□□ -0.45
SF3A1-203ENST00000444440 RPS6KA5O75582 802 aa12.25□□□□□ -0.45
SF3A1-203ENST00000444440 RPLP2P05387 115 aaKnown RBP12.25□□□□□ -0.45
SF3A1-203ENST00000444440 IBSPP21815 317 aaPredicted RBP12.25□□□□□ -0.45
SF3A1-203ENST00000444440 JAK3P52333 1124 aa12.25□□□□□ -0.45
SF3A1-203ENST00000444440 SPIRE1Q08AE8 756 aa12.25□□□□□ -0.45
SF3A1-203ENST00000444440 SKIV2LQ15477 1246 aaKnown RBP12.25□□□□□ -0.45
SF3A1-203ENST00000444440 MTERF2Q49AM1 385 aa12.25□□□□□ -0.45
SF3A1-203ENST00000444440 PAN2Q504Q3 1202 aaKnown RBP12.25□□□□□ -0.45
SF3A1-203ENST00000444440 PLA2G4FQ68DD2 849 aa12.25□□□□□ -0.45
SF3A1-203ENST00000444440 PPP4R3AQ6IN85 833 aa12.25□□□□□ -0.45
SF3A1-203ENST00000444440 ZNF579Q8NAF0 562 aaKnown RBP12.25□□□□□ -0.45
SF3A1-203ENST00000444440 ATXN2LQ8WWM7 1075 aaKnown RBP12.25□□□□□ -0.45
SF3A1-203ENST00000444440 FAM167AQ96KS9 214 aa12.25□□□□□ -0.45
SF3A1-203ENST00000444440 NECAB3Q96P71 396 aaPredicted RBP12.25□□□□□ -0.45
SF3A1-203ENST00000444440 ADAMTS10Q9H324 1103 aa12.25□□□□□ -0.45
SF3A1-203ENST00000444440 SEPT9Q9UHD8 586 aaPredicted RBP12.25□□□□□ -0.45
SF3A1-203ENST00000444440 ST3GAL5Q9UNP4 418 aa12.25□□□□□ -0.45
SF3A1-203ENST00000444440 MRPL42Q9Y6G3 142 aaKnown RBP12.25□□□□□ -0.45
SF3A1-203ENST00000444440 NCOR1O75376 2440 aa12.25□□□□□ -0.45
SF3A1-203ENST00000444440 MMP1P03956 469 aa12.24□□□□□ -0.45
SF3A1-203ENST00000444440 FGFR4P22455 802 aa12.24□□□□□ -0.45
SF3A1-203ENST00000444440 CTNNB1P35222 781 aa12.24□□□□□ -0.45
SF3A1-203ENST00000444440 KRT2P35908 639 aa12.24□□□□□ -0.45
SF3A1-203ENST00000444440 CRYBB1P53674 252 aaPredicted RBP12.24□□□□□ -0.45
SF3A1-203ENST00000444440 NLRP11P59045 1033 aaKnown RBP12.24□□□□□ -0.45
SF3A1-203ENST00000444440 MRPS5P82675 430 aaKnown RBP12.24□□□□□ -0.45
SF3A1-203ENST00000444440 GUCY1B3Q02153 619 aa12.24□□□□□ -0.45
SF3A1-203ENST00000444440 PPP2R5CQ13362 524 aa12.24□□□□□ -0.45
SF3A1-203ENST00000444440 GPM6BQ13491 265 aa12.24□□□□□ -0.45
SF3A1-203ENST00000444440 DSC3Q14574 896 aa12.24□□□□□ -0.45
SF3A1-203ENST00000444440 ANO5Q75V66 913 aa12.24□□□□□ -0.45
SF3A1-203ENST00000444440 NPAS4Q8IUM7 802 aa12.24□□□□□ -0.45
SF3A1-203ENST00000444440 CCDC83Q8IWF9 413 aa12.24□□□□□ -0.45
SF3A1-203ENST00000444440 FIBCD1Q8N539 461 aa12.24□□□□□ -0.45
SF3A1-203ENST00000444440 RDM1Q8NG50 284 aa12.24□□□□□ -0.45
SF3A1-203ENST00000444440 CLP1Q92989 425 aaKnown RBP12.24□□□□□ -0.45
SF3A1-203ENST00000444440 ADAM2Q99965 735 aa12.24□□□□□ -0.45
SF3A1-203ENST00000444440 FTHL17Q9BXU8 183 aa12.24□□□□□ -0.45
SF3A1-203ENST00000444440 NIFKQ9BYG3 293 aaKnown RBP12.24□□□□□ -0.45
SF3A1-203ENST00000444440 LMCD1Q9NZU5 365 aa12.24□□□□□ -0.45
SF3A1-203ENST00000444440 CEP131Q9UPN4 1083 aa12.24□□□□□ -0.45
SF3A1-203ENST00000444440 AKT3Q9Y243 479 aa12.24□□□□□ -0.45
SF3A1-203ENST00000444440 MYH11P35749 1972 aa12.23□□□□□ -0.45
SF3A1-203ENST00000444440 TRIP11Q15643 1979 aa12.23□□□□□ -0.45
SF3A1-203ENST00000444440 IGKV6-21A0A0C4DH24 114 aa12.23□□□□□ -0.45
SF3A1-203ENST00000444440 C9IYK1 514 aa12.23□□□□□ -0.45
SF3A1-203ENST00000444440 C5orf67F2Z3F1 127 aa12.23□□□□□ -0.45
SF3A1-203ENST00000444440 ZBTB39O15060 712 aa12.23□□□□□ -0.45
SF3A1-203ENST00000444440 GRM6O15303 877 aa12.23□□□□□ -0.45
SF3A1-203ENST00000444440 CSDE1O75534 798 aaKnown RBP12.23□□□□□ -0.45
SF3A1-203ENST00000444440 BMP1P13497 986 aa12.23□□□□□ -0.45
SF3A1-203ENST00000444440 XBP1P17861 261 aa12.23□□□□□ -0.45
SF3A1-203ENST00000444440 GPC3P51654 580 aa12.23□□□□□ -0.45
SF3A1-203ENST00000444440 NPEPPSP55786 919 aa12.23□□□□□ -0.45
SF3A1-203ENST00000444440 BTG3Q14201 252 aaPredicted RBP12.23□□□□□ -0.45
SF3A1-203ENST00000444440 FAM102BQ5T8I3 360 aa12.23□□□□□ -0.45
SF3A1-203ENST00000444440 DIS3L2Q8IYB7 885 aaKnown RBP12.23□□□□□ -0.45
SF3A1-203ENST00000444440 MRPL38Q96DV4 380 aaKnown RBP12.23□□□□□ -0.45
SF3A1-203ENST00000444440 FAM20AQ96MK3 541 aa12.23□□□□□ -0.45
SF3A1-203ENST00000444440 SAMD11Q96NU1 681 aa12.23□□□□□ -0.45
SF3A1-203ENST00000444440 NRBP2Q9NSY0 501 aa12.23□□□□□ -0.45
SF3A1-203ENST00000444440 RNF19AQ9NV58 838 aa12.23□□□□□ -0.45
SF3A1-203ENST00000444440 MAGEB2O15479 319 aa12.22□□□□□ -0.45
SF3A1-203ENST00000444440 CSPG5O95196 566 aa12.22□□□□□ -0.45
SF3A1-203ENST00000444440 GCFC2P16383 781 aaKnown RBP12.22□□□□□ -0.45
SF3A1-203ENST00000444440 DNAJB1P25685 340 aa12.22□□□□□ -0.45
SF3A1-203ENST00000444440 BMPR1AP36894 532 aa12.22□□□□□ -0.45
SF3A1-203ENST00000444440 SARSP49591 514 aaKnown RBP12.22□□□□□ -0.45
SF3A1-203ENST00000444440 CAMK1Q14012 370 aa12.22□□□□□ -0.45
SF3A1-203ENST00000444440 XKR3Q5GH77 459 aa12.22□□□□□ -0.45
SF3A1-203ENST00000444440 KSR1Q8IVT5 923 aa12.22□□□□□ -0.45
SF3A1-203ENST00000444440 ADAMTS19Q8TE59 1207 aa12.22□□□□□ -0.45
SF3A1-203ENST00000444440 WASF1Q92558 559 aa12.22□□□□□ -0.45
SF3A1-203ENST00000444440 RGS18Q9NS28 235 aa12.22□□□□□ -0.45
SF3A1-203ENST00000444440 RGL1Q9NZL6 768 aa12.22□□□□□ -0.45
SF3A1-203ENST00000444440 DDX11L8A8MPP1 907 aa12.21□□□□□ -0.45
SF3A1-203ENST00000444440 FGFR1P11362 822 aa12.21□□□□□ -0.45
SF3A1-203ENST00000444440 PSMC5P62195 406 aa12.21□□□□□ -0.45
SF3A1-203ENST00000444440 TBC1D8BQ0IIM8 1120 aa12.21□□□□□ -0.45
SF3A1-203ENST00000444440 TCEAL5Q5H9L2 206 aa12.21□□□□□ -0.45
SF3A1-203ENST00000444440 NCAPH2Q6IBW4 605 aa12.21□□□□□ -0.45
SF3A1-203ENST00000444440 CMTR2Q8IYT2 770 aaKnown RBP12.21□□□□□ -0.45
SF3A1-203ENST00000444440 HLA-CQ95604 372 aa12.21□□□□□ -0.45
SF3A1-203ENST00000444440 DYDC2Q96IM9 177 aa12.21□□□□□ -0.45
SF3A1-203ENST00000444440 MAP7D2Q96T17 732 aa12.21□□□□□ -0.45
SF3A1-203ENST00000444440 TMEM60Q9H2L4 133 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 1224.8 ms