RNA–Protein interactions for RNA: ENST00000443780.5

UBE2D4-205, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-205ENST00000443780 NFX1Q12986 1120 aaKnown RBP22.94■■□□□ 1.26
UBE2D4-205ENST00000443780 FAM43BQ6ZT52 329 aaPredicted RBP22.94■■□□□ 1.26
UBE2D4-205ENST00000443780 POTEDQ86YR6 584 aa22.94■■□□□ 1.26
UBE2D4-205ENST00000443780 LRRC71Q8N4P6 559 aa22.94■■□□□ 1.26
UBE2D4-205ENST00000443780 BANK1Q8NDB2 785 aa22.94■■□□□ 1.26
UBE2D4-205ENST00000443780 FBXO22Q8NEZ5 403 aa22.94■■□□□ 1.26
UBE2D4-205ENST00000443780 ZSCAN31Q96LW9 406 aaPredicted RBP22.94■■□□□ 1.26
UBE2D4-205ENST00000443780 SAMD11Q96NU1 681 aa22.94■■□□□ 1.26
UBE2D4-205ENST00000443780 MAP7D2Q96T17 732 aa22.94■■□□□ 1.26
UBE2D4-205ENST00000443780 OSMRQ99650 979 aa22.94■■□□□ 1.26
UBE2D4-205ENST00000443780 LLPHQ9BRT6 129 aaKnown RBP22.94■■□□□ 1.26
UBE2D4-205ENST00000443780 LMCD1Q9NZU5 365 aa22.94■■□□□ 1.26
UBE2D4-205ENST00000443780 SEPT9Q9UHD8 586 aaPredicted RBP22.94■■□□□ 1.26
UBE2D4-205ENST00000443780 MARCH6O60337 910 aa22.93■■□□□ 1.26
UBE2D4-205ENST00000443780 PSMC5P62195 406 aa22.93■■□□□ 1.26
UBE2D4-205ENST00000443780 TBC1D8BQ0IIM8 1120 aa22.93■■□□□ 1.26
UBE2D4-205ENST00000443780 ODR4Q5SWX8 454 aa22.93■■□□□ 1.26
UBE2D4-205ENST00000443780 CRIPAKQ8N1N5 446 aa22.93■■□□□ 1.26
UBE2D4-205ENST00000443780 RC3H2Q9HBD1 1191 aaKnown RBP22.93■■□□□ 1.26
UBE2D4-205ENST00000443780 THEGQ9P2T0 379 aa22.93■■□□□ 1.26
UBE2D4-205ENST00000443780 ST3GAL5Q9UNP4 418 aa22.93■■□□□ 1.26
UBE2D4-205ENST00000443780 AKT3Q9Y243 479 aa22.93■■□□□ 1.26
UBE2D4-205ENST00000443780 ARID2Q68CP9 1835 aa22.92■■□□□ 1.26
UBE2D4-205ENST00000443780 TMEM150BA6NC51 233 aa22.92■■□□□ 1.26
UBE2D4-205ENST00000443780 NLRP11P59045 1033 aaKnown RBP22.92■■□□□ 1.26
UBE2D4-205ENST00000443780 MTERF2Q49AM1 385 aa22.92■■□□□ 1.26
UBE2D4-205ENST00000443780 EPC2Q52LR7 807 aa22.92■■□□□ 1.26
UBE2D4-205ENST00000443780 TMEM192Q8IY95 271 aa22.92■■□□□ 1.26
UBE2D4-205ENST00000443780 SLFN12Q8IYM2 578 aa22.92■■□□□ 1.26
UBE2D4-205ENST00000443780 ZNF710Q8N1W2 664 aa22.92■■□□□ 1.26
UBE2D4-205ENST00000443780 FIBCD1Q8N539 461 aa22.92■■□□□ 1.26
UBE2D4-205ENST00000443780 ZNF689Q96CS4 500 aaPredicted RBP22.92■■□□□ 1.26
UBE2D4-205ENST00000443780 CEP89Q96ST8 783 aa22.92■■□□□ 1.26
UBE2D4-205ENST00000443780 COL25A1Q9BXS0 654 aaPredicted RBP22.92■■□□□ 1.26
UBE2D4-205ENST00000443780 SH2B1Q9NRF2 756 aaPredicted RBP22.92■■□□□ 1.26
UBE2D4-205ENST00000443780 ADGRA3Q8IWK6 1321 aa22.91■■□□□ 1.26
UBE2D4-205ENST00000443780 TCF20Q9UGU0 1960 aaKnown RBP22.91■■□□□ 1.26
UBE2D4-205ENST00000443780 ATG2AQ2TAZ0 1938 aa22.91■■□□□ 1.26
UBE2D4-205ENST00000443780 DDX11L8A8MPP1 907 aa22.91■■□□□ 1.26
UBE2D4-205ENST00000443780 GPR182O15218 404 aa22.91■■□□□ 1.26
UBE2D4-205ENST00000443780 DGKIO75912 1065 aa22.91■■□□□ 1.26
UBE2D4-205ENST00000443780 BAG4O95429 457 aaKnown RBP22.91■■□□□ 1.26
UBE2D4-205ENST00000443780 QARSP47897 775 aaKnown RBP22.91■■□□□ 1.26
UBE2D4-205ENST00000443780 FAM228AQ86W67 206 aa22.91■■□□□ 1.26
UBE2D4-205ENST00000443780 NPAS4Q8IUM7 802 aa22.91■■□□□ 1.26
UBE2D4-205ENST00000443780 ADAMTS10Q9H324 1103 aa22.91■■□□□ 1.26
UBE2D4-205ENST00000443780 TTC28Q96AY4 2481 aa22.91■■□□□ 1.26
UBE2D4-205ENST00000443780 NCOR1O75376 2440 aa22.91■■□□□ 1.26
UBE2D4-205ENST00000443780 MGEA5O60502 916 aa22.9■■□□□ 1.26
UBE2D4-205ENST00000443780 STAG3L1P0CL83 205 aa22.9■■□□□ 1.26
UBE2D4-205ENST00000443780 GUCY1B3Q02153 619 aa22.9■■□□□ 1.26
UBE2D4-205ENST00000443780 EPHA7Q15375 998 aa22.9■■□□□ 1.26
UBE2D4-205ENST00000443780 ANO5Q75V66 913 aa22.9■■□□□ 1.26
UBE2D4-205ENST00000443780 ATXN2LQ8WWM7 1075 aaKnown RBP22.9■■□□□ 1.26
UBE2D4-205ENST00000443780 SH2D3AQ9BRG2 576 aa22.9■■□□□ 1.26
UBE2D4-205ENST00000443780 IGKV6-21A0A0C4DH24 114 aa22.89■■□□□ 1.25
UBE2D4-205ENST00000443780 DKC1O60832 514 aaKnown RBP eCLIP22.89■■□□□ 1.25
UBE2D4-205ENST00000443780 P4HBP07237 508 aaKnown RBP22.89■■□□□ 1.25
UBE2D4-205ENST00000443780 GPC3P51654 580 aa22.89■■□□□ 1.25
UBE2D4-205ENST00000443780 SPIRE1Q08AE8 756 aa22.89■■□□□ 1.25
UBE2D4-205ENST00000443780 BTG3Q14201 252 aaPredicted RBP22.89■■□□□ 1.25
UBE2D4-205ENST00000443780 SAFBQ15424 915 aaKnown RBP eCLIP22.89■■□□□ 1.25
UBE2D4-205ENST00000443780 SKIV2LQ15477 1246 aaKnown RBP22.89■■□□□ 1.25
UBE2D4-205ENST00000443780 C8orf76Q96K31 380 aa22.89■■□□□ 1.25
UBE2D4-205ENST00000443780 ADAM2Q99965 735 aa22.89■■□□□ 1.25
UBE2D4-205ENST00000443780 RGS18Q9NS28 235 aa22.89■■□□□ 1.25
UBE2D4-205ENST00000443780 DENND3A2RUS2 1198 aa22.88■■□□□ 1.25
UBE2D4-205ENST00000443780 H3BNC9 293 aa22.88■■□□□ 1.25
UBE2D4-205ENST00000443780 WNT7AO00755 349 aa22.88■■□□□ 1.25
UBE2D4-205ENST00000443780 MAFO75444 373 aaPredicted RBP22.88■■□□□ 1.25
UBE2D4-205ENST00000443780 LINC00271P0C7V0 271 aa22.88■■□□□ 1.25
UBE2D4-205ENST00000443780 EIF4BP23588 611 aaKnown RBP22.88■■□□□ 1.25
UBE2D4-205ENST00000443780 SARSP49591 514 aaKnown RBP22.88■■□□□ 1.25
UBE2D4-205ENST00000443780 HMGN5P82970 282 aaKnown RBP22.88■■□□□ 1.25
UBE2D4-205ENST00000443780 DRP2Q13474 957 aa22.88■■□□□ 1.25
UBE2D4-205ENST00000443780 GPM6BQ13491 265 aa22.88■■□□□ 1.25
UBE2D4-205ENST00000443780 RABEP1Q15276 862 aa22.88■■□□□ 1.25
UBE2D4-205ENST00000443780 TJAP1Q5JTD0 557 aa22.88■■□□□ 1.25
UBE2D4-205ENST00000443780 NCAPH2Q6IBW4 605 aa22.88■■□□□ 1.25
UBE2D4-205ENST00000443780 ZNF668Q96K58 619 aaPredicted RBP22.88■■□□□ 1.25
UBE2D4-205ENST00000443780 C1orf112Q9NSG2 853 aa22.88■■□□□ 1.25
UBE2D4-205ENST00000443780 WRAP73Q9P2S5 460 aaPredicted RBP22.88■■□□□ 1.25
UBE2D4-205ENST00000443780 BMPR1AP36894 532 aa22.87■■□□□ 1.25
UBE2D4-205ENST00000443780 MRPS5P82675 430 aaKnown RBP22.87■■□□□ 1.25
UBE2D4-205ENST00000443780 CALCRLQ16602 461 aa22.87■■□□□ 1.25
UBE2D4-205ENST00000443780 PLA2G4FQ68DD2 849 aa22.87■■□□□ 1.25
UBE2D4-205ENST00000443780 SLC24A5Q71RS6 500 aa22.87■■□□□ 1.25
UBE2D4-205ENST00000443780 CMTR2Q8IYT2 770 aaKnown RBP22.87■■□□□ 1.25
UBE2D4-205ENST00000443780 CLP1Q92989 425 aaKnown RBP22.87■■□□□ 1.25
UBE2D4-205ENST00000443780 LXNQ9BS40 222 aa22.87■■□□□ 1.25
UBE2D4-205ENST00000443780 RGL1Q9NZL6 768 aa22.87■■□□□ 1.25
UBE2D4-205ENST00000443780 LRFN2Q9ULH4 789 aa22.87■■□□□ 1.25
UBE2D4-205ENST00000443780 PCDHA12Q9UN75 941 aa22.87■■□□□ 1.25
UBE2D4-205ENST00000443780 RWDD3Q9Y3V2 267 aa22.87■■□□□ 1.25
UBE2D4-205ENST00000443780 C9IYK1 514 aa22.86■■□□□ 1.25
UBE2D4-205ENST00000443780 C5orf67F2Z3F1 127 aa22.86■■□□□ 1.25
UBE2D4-205ENST00000443780 NEMFO60524 1076 aa22.86■■□□□ 1.25
UBE2D4-205ENST00000443780 RB1P06400 928 aa22.86■■□□□ 1.25
UBE2D4-205ENST00000443780 IBSPP21815 317 aaPredicted RBP22.86■■□□□ 1.25
UBE2D4-205ENST00000443780 CTNNB1P35222 781 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms